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CmoCh17G011110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglutamic acid-rich protein
Genome locationCmo_Chr17:9119596..9119973
RNA-Seq ExpressionCmoCh17G011110
SyntenyCmoCh17G011110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575870.1 hypothetical protein SDJN03_26509, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5895.28Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE--DDDDDDDENEEEVESKPIGFMTESSA
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAMRNKVQTYE  DDDDDDDENEEEVESKPIGFMTESSA
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE--DDDDDDDENEEEVESKPIGFMTESSA

Query:  SIDSAEEFKMLNEVEKNRLFWETCLAS
        SIDSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  SIDSAEEFKMLNEVEKNRLFWETCLAS

XP_022953969.1 uncharacterized protein LOC111456367 [Cucurbita moschata]7.1e-62100Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI
        MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI

Query:  DSAEEFKMLNEVEKNRLFWETCLAS
        DSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  DSAEEFKMLNEVEKNRLFWETCLAS

XP_022991734.1 uncharacterized protein LOC111488264 [Cucurbita maxima]1.1e-5489.06Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE---DDDDDDDENEEEVESKPIGFMTESS
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAM N+ +TYE   DDDDDD+EN+EEVESKPIGFMTESS
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE---DDDDDDDENEEEVESKPIGFMTESS

Query:  ASIDSAEEFKMLNEVEKNRLFWETCLAS
        ASIDSAEEFKMLNEV+KNRLFWETCLAS
Subjt:  ASIDSAEEFKMLNEVEKNRLFWETCLAS

XP_023522205.1 uncharacterized protein LOC111786091 [Cucurbita pepo subsp. pepo]8.4e-5591.2Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAMRN+VQ YE  +DDDDEN+EEVESKPIGFMTESS SI
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI

Query:  DSAEEFKMLNEVEKNRLFWETCLAS
        DSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  DSAEEFKMLNEVEKNRLFWETCLAS

XP_038896353.1 uncharacterized protein LOC120084618 [Benincasa hispida]1.2e-3262.96Show/hide
Query:  MLSTPFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAM-RNKVQTYEDDDDDDDE-----NEEEVESKPI
        MLSTP FFNF+PH +    G HIED SS  L EATGDSE DS V  G S  S EFNDAESCTD+TP +  N+   YE +D+D++E      +E VESK I
Subjt:  MLSTPFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAM-RNKVQTYEDDDDDDDE-----NEEEVESKPI

Query:  GFMTESSASIDSAEEFKMLNEVEKNRLFWETCLAS
        GF T+S+ASIDS +EFKMLNEV+KNRLFWETCLAS
Subjt:  GFMTESSASIDSAEEFKMLNEVEKNRLFWETCLAS

TrEMBL top hitse value%identityAlignment
A0A0A0K519 Uncharacterized protein6.5e-2959.86Show/hide
Query:  MLSTPFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMR---------NKVQTYEDDDDDDDENEEE---
        MLS+P FFNF+PH +    G HIED SS  LFEATGDSE D      SS VS EFNDAESCTD+T  +           +    E+DDDD DE EEE   
Subjt:  MLSTPFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMR---------NKVQTYEDDDDDDDENEEE---

Query:  VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        VESK IGF  +S+ASIDS  +EFKMLNEV+KNRLFWETCLAS
Subjt:  VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A1S3BRI2 glutamic acid-rich protein7.7e-3059.33Show/hide
Query:  MLST-PFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDD--------------DD
        MLST P FFNF+PH +    G HIED SS  LFEATGDSEADS V     SS  + EFNDAESCTD+TP M    +  +DDDDD              DD
Subjt:  MLST-PFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDD--------------DD

Query:  ENEEE---VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        E+EEE   VESK IGF  +S+ASIDS  ++FKMLNEV+KNRLFWETCLAS
Subjt:  ENEEE---VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A5A7UVG0 Glutamic acid-rich protein1.3e-2959.86Show/hide
Query:  MLST-PFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDETPAMRNKVQTYEDD-----------DDDDDENE
        MLST P FFNF+PH +    G HIED SS  LFEATGDSEADS V     SS  + EFNDAESCTD+TP M    +  +DD           DDDD +NE
Subjt:  MLST-PFFFNFHPHQY----GTHIEDFSSQLLFEATGDSEADSLVG--HGSSTVSVEFNDAESCTDETPAMRNKVQTYEDD-----------DDDDDENE

Query:  EE---VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS
        EE   VESK IGF  +S+ASIDS  ++FKMLNEV+KNRLFWETCLAS
Subjt:  EE---VESKPIGFMTESSASIDSA-EEFKMLNEVEKNRLFWETCLAS

A0A6J1GRH1 uncharacterized protein LOC1114563673.4e-62100Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI
        MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASI

Query:  DSAEEFKMLNEVEKNRLFWETCLAS
        DSAEEFKMLNEVEKNRLFWETCLAS
Subjt:  DSAEEFKMLNEVEKNRLFWETCLAS

A0A6J1JVN0 uncharacterized protein LOC1114882645.3e-5589.06Show/hide
Query:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE---DDDDDDDENEEEVESKPIGFMTESS
        MLSTPFFFNFHPHQ+G HIEDFSS LLFEATGDSEADSLVGHGSSTVSVEFNDAESCTD+TPAM N+ +TYE   DDDDDD+EN+EEVESKPIGFMTESS
Subjt:  MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYE---DDDDDDDENEEEVESKPIGFMTESS

Query:  ASIDSAEEFKMLNEVEKNRLFWETCLAS
        ASIDSAEEFKMLNEV+KNRLFWETCLAS
Subjt:  ASIDSAEEFKMLNEVEKNRLFWETCLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAACTCCTTTCTTCTTCAACTTCCATCCTCACCAATATGGCACTCACATTGAGGATTTTTCATCTCAATTGCTCTTCGAGGCGACGGGCGACTCCGAGGCCGA
CTCCTTGGTCGGCCACGGAAGCTCGACCGTCTCGGTGGAGTTCAACGACGCTGAATCTTGCACGGATGAAACTCCTGCTATGCGTAACAAGGTCCAGACGTATGAAGACG
ATGACGATGACGATGACGAGAATGAGGAGGAGGTGGAAAGCAAGCCAATTGGATTCATGACAGAGTCAAGTGCTTCTATTGATTCAGCTGAGGAGTTCAAAATGTTGAAT
GAGGTGGAGAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCAACTCCTTTCTTCTTCAACTTCCATCCTCACCAATATGGCACTCACATTGAGGATTTTTCATCTCAATTGCTCTTCGAGGCGACGGGCGACTCCGAGGCCGA
CTCCTTGGTCGGCCACGGAAGCTCGACCGTCTCGGTGGAGTTCAACGACGCTGAATCTTGCACGGATGAAACTCCTGCTATGCGTAACAAGGTCCAGACGTATGAAGACG
ATGACGATGACGATGACGAGAATGAGGAGGAGGTGGAAAGCAAGCCAATTGGATTCATGACAGAGTCAAGTGCTTCTATTGATTCAGCTGAGGAGTTCAAAATGTTGAAT
GAGGTGGAGAAAAACAGGTTGTTTTGGGAGACTTGTTTGGCTTCATAA
Protein sequenceShow/hide protein sequence
MLSTPFFFNFHPHQYGTHIEDFSSQLLFEATGDSEADSLVGHGSSTVSVEFNDAESCTDETPAMRNKVQTYEDDDDDDDENEEEVESKPIGFMTESSASIDSAEEFKMLN
EVEKNRLFWETCLAS