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CmoCh17G011230 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011230
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAutophagy-related protein 18g isoform X2
Genome locationCmo_Chr17:9174227..9175621
RNA-Seq ExpressionCmoCh17G011230
SyntenyCmoCh17G011230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057555.1 autophagy-related protein 18g isoform X1 [Cucumis melo var. makuwa]1.4e-0871.11Show/hide
Query:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
        YPIVGGDRRCSS VV +TD + E IDGE DDSD DLD W +E VE
Subjt:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
KAG6575880.1 39S ribosomal protein L46, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2380.88Show/hide
Query:  MVRPEALFVALIYPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVEIVLCCYSGTCR
        + + E +   + YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGW SEFVEIVLCCYSGTC+
Subjt:  MVRPEALFVALIYPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVEIVLCCYSGTCR
TYK18276.1 autophagy-related protein 18g isoform X2 [Cucumis melo var. makuwa]1.4e-0871.11Show/hide
Query:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
        YPIVGGDRRCSS VV +TD + E IDGE DDSD DLD W +E VE
Subjt:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
TrEMBL top hitse value%identityAlignment
A0A5A7UVG7 Autophagy-related protein 18g isoform X16.9e-0971.11Show/hide
Query:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
        YPIVGGDRRCSS VV +TD + E IDGE DDSD DLD W +E VE
Subjt:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
A0A5D3D409 Autophagy-related protein 18g isoform X26.9e-0971.11Show/hide
Query:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
        YPIVGGDRRCSS VV +TD + E IDGE DDSD DLD W +E VE
Subjt:  YPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATATACCCGATCGTCGGCGGCGATCGGAGATGTTCTTCGGCGGTGGTACAGGAGACGGATTTAGTAACAGAGGTGAT
TGATGGTGAGGCTGATGATTCTGATGGTGATTTGGACGGTTGGCTGAGTGAGTTCGTAGAGATAGTGCTGTGTTGCTACAGTGGTACTTGTCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATATACCCGATCGTCGGCGGCGATCGGAGATGTTCTTCGGCGGTGGTACAGGAGACGGATTTAGTAACAGAGGTGAT
TGATGGTGAGGCTGATGATTCTGATGGTGATTTGGACGGTTGGCTGAGTGAGTTCGTAGAGATAGTGCTGTGTTGCTACAGTGGTACTTGTCGATAA
Protein sequenceShow/hide protein sequence
MVRPEALFVALIYPIVGGDRRCSSAVVQETDLVTEVIDGEADDSDGDLDGWLSEFVEIVLCCYSGTCR