; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G011390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpleckstrin homology-like domain family A member 1
Genome locationCmo_Chr17:9267462..9269320
RNA-Seq ExpressionCmoCh17G011390
SyntenyCmoCh17G011390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575895.1 hypothetical protein SDJN03_26534, partial [Cucurbita argyrosperma subsp. sororia]2.6e-2893.94Show/hide
Query:  MLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSNSTTR
        MLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDS    R
Subjt:  MLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSNSTTR

KAG7014427.1 hypothetical protein SDJN02_24604, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-6982.35Show/hide
Query:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENC
        M RFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHG PPNHKHLRTHWHGHQHQISLSPMEENC
Subjt:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENC

Query:  CKWVQQLDS---------------------------NSTTR-SSLRSFHLIRLSTLEFCLEWWKLIRSQD
        CKWVQQLDS                           NSTTR SSLRSFHLIRLSTLEFCLEWWKLIRSQD
Subjt:  CKWVQQLDS---------------------------NSTTR-SSLRSFHLIRLSTLEFCLEWWKLIRSQD

XP_023548911.1 uncharacterized protein LOC111807420 [Cucurbita pepo subsp. pepo]1.9e-5592.98Show/hide
Query:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENC
        MGRFKIL+FAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPS+SLSDNHESHGPPPNH+HL THWHGHQHQISLSPMEENC
Subjt:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENC

Query:  CKWVQQLDSNSTTR
        CKWVQQLDS    R
Subjt:  CKWVQQLDSNSTTR

XP_031744964.1 uncharacterized protein LOC116405195 [Cucumis sativus]7.6e-2863.64Show/hide
Query:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTM-ALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEEN
        MGRFKILI +V LFL LI D+E+QWQPP VAPRP C SQI LAN ACA LPY+ +    PPS SLS+N +S G P  H H   H H H H+I L+P+EEN
Subjt:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTM-ALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEEN

Query:  CCKWVQQLDS
        CCKWVQQ+DS
Subjt:  CCKWVQQLDS

XP_038899044.1 uncharacterized protein LOC120086453 [Benincasa hispida]2.0e-3676.11Show/hide
Query:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYST-MALSPPSLSLSDNHESHGPP---PNHKHLRTHWHGHQHQISLSPM
        MGRFKILIF+VTLFLALI DTE QWQPP VAPRP C SQIALAN ACAMLPYST +   PPSLSLSDNHES G P     H H   H HGHQ +I LSPM
Subjt:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYST-MALSPPSLSLSDNHESHGPP---PNHKHLRTHWHGHQHQISLSPM

Query:  EENCCKWVQQLDS
        EENCCKWVQQLDS
Subjt:  EENCCKWVQQLDS

TrEMBL top hitse value%identityAlignment
A0A0A0KAN7 Uncharacterized protein3.7e-2863.64Show/hide
Query:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTM-ALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEEN
        MGRFKILI +V LFL LI D+E+QWQPP VAPRP C SQI LAN ACA LPY+ +    PPS SLS+N +S G P  H H   H H H H+I L+P+EEN
Subjt:  MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTM-ALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEEN

Query:  CCKWVQQLDS
        CCKWVQQ+DS
Subjt:  CCKWVQQLDS

A0A0B2QE80 Uncharacterized protein5.7e-1339.13Show/hide
Query:  FKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKW
        F ++  A+TLFLA++P  E+Q +P    PRP C SQ AL N AC+ LP+S   + P S S  + + +H    N  H   H HGH+H+   +P E+NCC+W
Subjt:  FKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKW

Query:  VQQLDSNSTTRSSLR
         +++D        LR
Subjt:  VQQLDSNSTTRSSLR

A0A5A7UTY5 Uncharacterized protein2.5e-2166.67Show/hide
Query:  QWQPPKVAPRPPCPSQIALANLACAMLPYS-TMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDS
        QWQPP VAPRP C SQIALAN ACA LPYS  +   PPS SLS NH+S G P  H H   H H H H+I LSP+EENCCKWVQQ+DS
Subjt:  QWQPPKVAPRPPCPSQIALANLACAMLPYS-TMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDS

A0A6A1UVD3 Uncharacterized protein2.6e-1339.09Show/hide
Query:  ILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGH-------QHQISLSPMEE
        +++FA ++ L L+P +E Q +PP++ PRP C SQ +LAN ACA+LP + + L+PP     D+ +      +H+H   H HGH       +H+  L+P  E
Subjt:  ILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGH-------QHQISLSPMEE

Query:  NCCKWVQQLD
        NCC+W  Q+D
Subjt:  NCCKWVQQLD

A0A6P4AZX7 uncharacterized protein DDB_G02727245.7e-1346.39Show/hide
Query:  LALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNH--ESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDS
        L L+P  E+Q  PP VAPRP C SQ ALA+ AC+++P++ +   PPS     +    SHG    H+H   H HGH+H+   SP EE+CC+W++QLDS
Subjt:  LALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNH--ESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G63095.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.9e-0541.38Show/hide
Query:  LIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPP----NHKHLRTHWHGHQH
        L  AVTL LAL   T  Q       PRP C SQ ALAN AC+ LP  T+   PP   ++       PPP    +H H   H H H H
Subjt:  LIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPP----NHKHLRTHWHGHQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCC
CTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCCTC
CGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTAAC
TCAACAACAAGATCGTCATTGAGGTCATTTCACCTTATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGTTGATTAGATCACAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGATTCAAGATCCTTATATTTGCTGTAACTTTGTTCTTGGCTCTGATTCCTGACACAGAGGCTCAATGGCAGCCACCGAAAGTTGCTCCTCGGCCACCCTGCCC
CTCCCAGATCGCGCTAGCAAACCTTGCTTGCGCAATGCTGCCTTACTCCACCATGGCCCTGTCACCTCCATCACTGTCACTCTCTGATAACCATGAAAGCCACGGCCCTC
CGCCAAACCACAAACACTTGCGCACGCACTGGCACGGACACCAGCACCAGATATCCCTATCGCCAATGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGACAGTAAC
TCAACAACAAGATCGTCATTGAGGTCATTTCACCTTATTCGTTTATCAACTTTAGAATTTTGCCTTGAATGGTGGAAGTTGATTAGATCACAAGACTAA
Protein sequenceShow/hide protein sequence
MGRFKILIFAVTLFLALIPDTEAQWQPPKVAPRPPCPSQIALANLACAMLPYSTMALSPPSLSLSDNHESHGPPPNHKHLRTHWHGHQHQISLSPMEENCCKWVQQLDSN
STTRSSLRSFHLIRLSTLEFCLEWWKLIRSQD