; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G011730 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011730
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUPF0690 protein C1orf52 homolog
Genome locationCmo_Chr17:9443875..9445580
RNA-Seq ExpressionCmoCh17G011730
SyntenyCmoCh17G011730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575926.1 hypothetical protein SDJN03_26565, partial [Cucurbita argyrosperma subsp. sororia]4.3e-8498.88Show/hide
Query:  MPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET
        MPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEV  KSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET
Subjt:  MPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRET

Query:  RENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        RENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  RENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022150145.1 UPF0690 protein C1orf52 homolog [Momordica charantia]3.1e-7487.98Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWS
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+V  KS KRK+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWS

Query:  TGRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
         G+ETRENR+TEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  TGRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022953507.1 UPF0690 protein C1orf52 homolog [Cucurbita moschata]3.5e-8698.9Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEV  KSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_022991319.1 UPF0690 protein C1orf52 homolog [Cucurbita maxima]3.9e-8597.8Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEV  KSGKRK+IAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENR+TEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

XP_038896833.1 UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]7.6e-7384.21Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRA+PWSDEEDNS    SSLSQSDSDADED+G+ KA FRVKAGRSSKEK  EV    GKRK++AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALT--------QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENR+TEESYEERQKTRAALENGEQLLTA T        +KEKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALT--------QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

TrEMBL top hitse value%identityAlignment
A0A1S3BRX7 Uncharacterized protein4.1e-7282.29Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNS    SSLSQSDSD DED+G+ KA FRVK GRSSKEK TEV    GKRK++AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENR+TEESYEERQKTRAALENGEQLLTA T+K          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A5D3DRL7 UPF0690 protein C1orf52-like protein4.1e-7282.29Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNS    SSLSQSDSD DED+G+ KA FRVK GRSSKEK TEV    GKRK++AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENR+TEESYEERQKTRAALENGEQLLTA T+K          EKKN+SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQK----------EKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1DAL0 UPF0690 protein C1orf52 homolog1.5e-7487.98Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWS
        MKR MPWSDEEDNSSSK+SSLSQSDSDADEDSG+ KA FRVKA GRSSKEK T+V  KS KRK+ AVDF+ LKRHGYKGGPSVL VPPPKENEKQDWSWS
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKA-GRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWS

Query:  TGRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
         G+ETRENR+TEESYEERQKTRAALENGEQLLTA T+KEKKNISFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSGFDT
Subjt:  TGRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1GNF0 UPF0690 protein C1orf52 homolog1.7e-8698.9Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEV  KSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

A0A6J1JUH2 UPF0690 protein C1orf52 homolog1.9e-8597.8Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEV  KSGKRK+IAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        GRETRENR+TEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
Subjt:  GRETRENRDTEESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G04614.1 unknown protein1.7e-3045.36Show/hide
Query:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST
        MK+ +   D++D+   ++SS   S S A + + D   I   K  R SK+     + +  K+   A D+++L++HGYK    +  +P P   EKQDWSW+T
Subjt:  MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWST

Query:  GRETRENRDTEESYEERQKTR-AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT
        G++ +   + +ESY+ER+ TR AA+  GE +  A  + ++KN+SFSQKEK+KR+LGQASRGKNYVEEEKR LRESG+YSGFD+
Subjt:  GRETRENRDTEESYEERQKTR-AALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGGGCAATGCCATGGAGCGATGAAGAGGACAATTCGTCATCTAAAGAGTCGTCTTTATCACAGTCGGATTCAGACGCTGATGAAGATAGTGGCGATGCAAAAGC
GATCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAGGGCACTGAAGTTATGATCAAATCTGGGAAGAGGAAGAACATTGCTGTGGACTTCGATACGTTGAAACGCC
ACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAGAATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGACACT
GAAGAATCATATGAAGAGAGACAGAAAACAAGAGCTGCACTAGAAAATGGAGAGCAGCTGCTAACCGCGCTAACTCAGAAGGAGAAGAAGAACATTTCCTTCTCCCAGAA
GGAAAAGAGGAAAAGAGAGCTTGGTCAAGCAAGCAGGGGGAAAAATTATGTCGAAGAAGAAAAGAGAACGTTGAGGGAGAGTGGAATCTACTCTGGTTTTGATACTTAA
mRNA sequenceShow/hide mRNA sequence
TCAAAAACCCTAACCCACTGAATCTATCGGGGAAAAGAAGGGATTCATTTTCCTTGTCCAGACTTTCACAAGCCCTAGCTTCCAATCAAAGCTCAATCCCCTGCCTCGGC
GCTACTGATTTCTACACGATTCGTCTTGCTTTGACATGAAAAGGGCAATGCCATGGAGCGATGAAGAGGACAATTCGTCATCTAAAGAGTCGTCTTTATCACAGTCGGAT
TCAGACGCTGATGAAGATAGTGGCGATGCAAAAGCGATCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAGGGCACTGAAGTTATGATCAAATCTGGGAAGAGGAA
GAACATTGCTGTGGACTTCGATACGTTGAAACGCCACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAGAATGAGAAGCAAGATTGGTCATGGT
CTACTGGCAGGGAGACTCGGGAAAACAGAGACACTGAAGAATCATATGAAGAGAGACAGAAAACAAGAGCTGCACTAGAAAATGGAGAGCAGCTGCTAACCGCGCTAACT
CAGAAGGAGAAGAAGAACATTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCAAGCAGGGGGAAAAATTATGTCGAAGAAGAAAAGAGAACGTTGAG
GGAGAGTGGAATCTACTCTGGTTTTGATACTTAA
Protein sequenceShow/hide protein sequence
MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVMIKSGKRKNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDT
EESYEERQKTRAALENGEQLLTALTQKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSGFDT