; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G011840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionJmjC domain-containing protein
Genome locationCmo_Chr17:9506387..9512654
RNA-Seq ExpressionCmoCh17G011840
SyntenyCmoCh17G011840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014469.1 hypothetical protein SDJN02_24647 [Cucurbita argyrosperma subsp. argyrosperma]3.1e-6799.25Show/hide
Query:  MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLEND
        MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHIS+SDQIKHLQSSSTKGSADEVERMEMTSLQSLEND
Subjt:  MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLEND

Query:  QIATFIWNLEPCILQKFLLTTAVISFDFPITFTS
        QIATFIWNLEPCILQKFLLTTAVISFDFPITFTS
Subjt:  QIATFIWNLEPCILQKFLLTTAVISFDFPITFTS

XP_008451321.1 PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo]1.9e-3248.78Show/hide
Query:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF
        QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSSST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK 
Subjt:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF

Query:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK
        LLT A                          FD             F   F SSFDDQFA  DAIL RKESFARQ +  S +  G ++ S +  C   +K
Subjt:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK

Query:  LFLDW
          L W
Subjt:  LFLDW

XP_022954214.1 uncharacterized protein LOC111456538 isoform X1 [Cucurbita moschata]3.3e-6180.49Show/hide
Query:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
        MDWRSLSEWISYNGGLGNLQVVFQRSR                                QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
Subjt:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD

Query:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
        QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Subjt:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT

XP_022954215.1 uncharacterized protein LOC111456538 isoform X2 [Cucurbita moschata]4.9e-49100Show/hide
Query:  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF
        QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF
Subjt:  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF

Query:  PITFT
        PITFT
Subjt:  PITFT

XP_022954216.1 uncharacterized protein LOC111456538 isoform X3 [Cucurbita moschata]3.3e-6180.49Show/hide
Query:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
        MDWRSLSEWISYNGGLGNLQVVFQRSR                                QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
Subjt:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD

Query:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
        QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Subjt:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT

TrEMBL top hitse value%identityAlignment
A0A1S3BR69 uncharacterized protein LOC103492647 isoform X39.1e-3348.78Show/hide
Query:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF
        QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSSST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK 
Subjt:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF

Query:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK
        LLT A                          FD             F   F SSFDDQFA  DAIL RKESFARQ +  S +  G ++ S +  C   +K
Subjt:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK

Query:  LFLDW
          L W
Subjt:  LFLDW

A0A1S3BR94 uncharacterized protein LOC103492647 isoform X19.1e-3348.78Show/hide
Query:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF
        QGVQCLSQ  EGGDL+EKELREET+SH            L+T+VHDH+S SDQ   LQSSST GSAD  E M  TSL SLENDQ+A  IWNLEPC+LQK 
Subjt:  QGVQCLSQLLEGGDLREKELREETYSHR-----------LITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKF

Query:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK
        LLT A                          FD             F   F SSFDDQFA  DAIL RKESFARQ +  S +  G ++ S +  C   +K
Subjt:  LLTTA-----------------------VISFD-------------FPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPAD-SGAYRCYPFSK

Query:  LFLDW
          L W
Subjt:  LFLDW

A0A6J1GQB4 uncharacterized protein LOC111456538 isoform X31.6e-6180.49Show/hide
Query:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
        MDWRSLSEWISYNGGLGNLQVVFQRSR                                QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
Subjt:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD

Query:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
        QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Subjt:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT

A0A6J1GRU8 uncharacterized protein LOC111456538 isoform X22.4e-49100Show/hide
Query:  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF
        QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF
Subjt:  QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDF

Query:  PITFT
        PITFT
Subjt:  PITFT

A0A6J1GSC3 uncharacterized protein LOC111456538 isoform X11.6e-6180.49Show/hide
Query:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
        MDWRSLSEWISYNGGLGNLQVVFQRSR                                QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD
Subjt:  MDWRSLSEWISYNGGLGNLQVVFQRSRY-------------------------------QGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASD

Query:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
        QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT
Subjt:  QIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTAVISFDFPITFT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G19840.2 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein8.4e-0728.33Show/hide
Query:  LSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGS-ADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTA----------
        LS L E   L + +       H LI++VHDH++A D  K LQ +S   S   E  +  + ++  LE+D++A  +WNLE   L+  LL  A          
Subjt:  LSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGS-ADEVERMEMTSLQSLENDQIATFIWNLEPCILQKFLLTTA----------

Query:  -------------------VISFDFPIT--------------------------FTSSFDDQFAATDAILYRKESFARQV
                           ++    PI                           F S+FDD+ AA D IL RKE+FA QV
Subjt:  -------------------VISFDFPIT--------------------------FTSSFDDQFAATDAILYRKESFARQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGGAGATCTTTATCGGAGTGGATTTCGTACAATGGCGGCCTTGGCAATCTACAGGTTGTATTTCAACGTTCCCGCTATCAAGGAGTTCAATGTTTGAGTCAATT
ACTTGAAGGTGGGGATTTGAGAGAAAAAGAGCTAAGGGAAGAAACTTATTCTCATAGGCTTATTACTATAGTTCATGACCACATAAGCGCTTCCGATCAAATTAAACACC
TACAATCAAGTTCTACAAAAGGTTCTGCAGATGAGGTGGAGAGGATGGAGATGACTAGTTTACAGAGCTTGGAGAACGATCAAATAGCTACCTTTATTTGGAATTTGGAA
CCATGTATTCTTCAAAAGTTCCTTCTCACCACGGCGGTGATTTCTTTTGACTTCCCCATTACATTTACAAGTTCATTTGATGATCAATTTGCTGCGACGGATGCAATTCT
ATACAGGAAAGAGTCTTTTGCTCGTCAGGTCATGGGGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCCATTTTCTAAGCTTTTCCTCG
ATTGGCATGCTGAAGAATATGTTGCATCAATGATTGATATGATTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTGGAGATCTTTATCGGAGTGGATTTCGTACAATGGCGGCCTTGGCAATCTACAGGTTGTATTTCAACGTTCCCGCTATCAAGGAGTTCAATGTTTGAGTCAATT
ACTTGAAGGTGGGGATTTGAGAGAAAAAGAGCTAAGGGAAGAAACTTATTCTCATAGGCTTATTACTATAGTTCATGACCACATAAGCGCTTCCGATCAAATTAAACACC
TACAATCAAGTTCTACAAAAGGTTCTGCAGATGAGGTGGAGAGGATGGAGATGACTAGTTTACAGAGCTTGGAGAACGATCAAATAGCTACCTTTATTTGGAATTTGGAA
CCATGTATTCTTCAAAAGTTCCTTCTCACCACGGCGGTGATTTCTTTTGACTTCCCCATTACATTTACAAGTTCATTTGATGATCAATTTGCTGCGACGGATGCAATTCT
ATACAGGAAAGAGTCTTTTGCTCGTCAGGTCATGGGGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCCATTTTCTAAGCTTTTCCTCG
ATTGGCATGCTGAAGAATATGTTGCATCAATGATTGATATGATTATCTGATAACAGTAGACTAGAAAAGCAGAGAAGGACAAGGTTTTAGTCAATAATTGGGATGTTATT
GCAGGTTAAGCTGGCTACTAAAGGTTGTGTTGTGGGGAATATGCACAGAAATTGATAAAGCCCCTCTTAGCAACAACAGTAACAAAAGAAAGACTCACCACAGAATTGCA
ATTCAATCTTCCAGAGCTCTTTGTGTTAGTTTGCAGCAGCACCCAAATCCCGGACCACCACCACAAACACTCGCTCACTGAGGCACAAATCCACATAACACCATCAACTT
AGGTTGCCTTTATTTTTTAAGAGAGGAAAAAAAGAAAAAAACACTCGCACTTGCAACTAAATTTTACTGCTCCCTCCATCTGACTTCACAAAAGGCTTCTCTATTCAAAT
AGTTCCAGTAATTTCTCAGTTCCTCTAGAAAAGTTGTGAAGGGGAAAAGAAAAAAAAAACATCTTGGGATTTGATTTTTTCAACTGGAATTTCACCCATGATGTGGAAAA
AGAATGTTTTGCCCGTTCTTGCCTGTAATGGTAATAAGGTTGAATATCCAACTTGTTAGGAATCACAAATCTCCACTCCACTTTAAGTATAAACTCTTATGGTTTTACTT
TTGGTTTTCCCGAAAAGCCTCGTATCAATAGAGATGTATTCCTTACTTATAAACCCATGATCATTTCCTTAATTAGCCAATGTAGAACTGCCTCCCAACAATTCTCAACA
CGACTGATAGGACAAATGTGAGTTTTAACCGTCCAAAGATAGGTTCTACAAGGCCTAAGTCCAATATGCCATATTTTGAGTTTGTGAGGAATAATTTTCAAAGTCCTGTT
TCAAAACAGACTCCTAGTCATCTTAAGTATAAAACTAGGTAACTTTAAATGAACCACTTTAAATTTGTCATTTTTTACTTGGTCACCACAAGCCTCCAATCTTGATCATT
ACAATACATTATGAAAAAAGAGGCTGGAAGGAGGAAGAGAGTGGCATCGCTGTCGCACAAATGGTGGGTTTGGGGTCCTCTGTAGAGCAGTAGGGGCCATAACCATTAAC
CACACTGGTCGCTCTCGAAGAGTACACGCATTGGCTCCCACCACCGACATCTCCCTTTGTCCACATCCCAATATTACTTCTCCTCCTTTCTTATTCCCATTACTTTTCTT
ATAGGCTCTGAGTTTTTCCCAATAATCATGTGGGAATTCGGTCAATCCGATTCTATATGAATTTGACT
Protein sequenceShow/hide protein sequence
MDWRSLSEWISYNGGLGNLQVVFQRSRYQGVQCLSQLLEGGDLREKELREETYSHRLITIVHDHISASDQIKHLQSSSTKGSADEVERMEMTSLQSLENDQIATFIWNLE
PCILQKFLLTTAVISFDFPITFTSSFDDQFAATDAILYRKESFARQVMGKSFKEIGPADSGAYRCYPFSKLFLDWHAEEYVASMIDMII