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CmoCh17G011990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G011990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionconserved peptide upstream open reading frame 7
Genome locationCmo_Chr17:9619275..9620087
RNA-Seq ExpressionCmoCh17G011990
SyntenyCmoCh17G011990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4291531.1 unnamed protein product [Prunus armeniaca]7.7e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
CAB4321849.1 unnamed protein product [Prunus armeniaca]7.7e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
KAB2075556.1 hypothetical protein ES319_A07G229800v1 [Gossypium barbadense]1.3e-0582.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
KAG7014483.1 hypothetical protein SDJN02_24661, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-2496.88Show/hide
Query:  FNLALVRVICGGSARKRALTVAVLVLNGVGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        FNLALVRVICGGSA KRALTVAVLVLNG+GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
Subjt:  FNLALVRVICGGSARKRALTVAVLVLNGVGMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
XP_016901085.1 PREDICTED: uncharacterized protein LOC107991169 [Cucumis melo]1.0e-0585.29Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGTD LL P +GPPIKRRAGLR KQAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
TrEMBL top hitse value%identityAlignment
A0A1S4DZE0 uncharacterized protein LOC1079911694.9e-0685.29Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGTD LL P +GPPIKRRAGLR KQAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
A0A5D2G1M8 Uncharacterized protein6.4e-0682.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
A0A5J5V730 Uncharacterized protein6.4e-0682.86Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL P +GPPIK RAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
A0A6J5VU64 Uncharacterized protein3.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
A0A6J5Y7L9 Uncharacterized protein3.8e-0685.71Show/hide
Query:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        GMGTD LL  A+GPPIKRRAGLR KQAGRGSYRGS
Subjt:  GMGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06149.1 conserved peptide upstream open reading frame 81.2e-0464.71Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MGT       +GPPI  RAGLR +QAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
AT2G31280.2 conserved peptide upstream open reading frame 74.5e-0462.5Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYR
        MG   +    +GPPIK RAGLR +QAGRGSYR
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYR
AT2G31280.4 conserved peptide upstream open reading frame 73.1e-0564.71Show/hide
Query:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS
        MG   +    +GPPIK RAGLR +QAGRGSYRGS
Subjt:  MGTDPLLSPAIGPPIKRRAGLRIKQAGRGSYRGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCGTCCGGTTGTATTAAAGGCGTTGGTTTTTCAAGTTCTCCCACCATCCGTTGCTGTGGCTTTCCTTTTTCCGTCTCCCTCTGTGAAATTCGGAGTCAAAACAAG
AAAAGGAAAGAATATGCAAGAAAATGTAGATCAGGGCGTTGAATTTCTCTGTGATTCTCGTCGTTTCTTTCGGTCAAAAAGCTTCAAATCTGTTTCGTTCTGGTTTAATC
TTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGAAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGAGTGGGGATGGGAACTGATCCTCTGCTATCACCA
GCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCCGTCCGGTTGTATTAAAGGCGTTGGTTTTTCAAGTTCTCCCACCATCCGTTGCTGTGGCTTTCCTTTTTCCGTCTCCCTCTGTGAAATTCGGAGTCAAAACAAG
AAAAGGAAAGAATATGCAAGAAAATGTAGATCAGGGCGTTGAATTTCTCTGTGATTCTCGTCGTTTCTTTCGGTCAAAAAGCTTCAAATCTGTTTCGTTCTGGTTTAATC
TTGCCCTTGTTCGAGTGATCTGTGGTGGGTCTGCGAGAAAAAGAGCTCTTACTGTTGCTGTTCTTGTTCTTAATGGAGTGGGGATGGGAACTGATCCTCTGCTATCACCA
GCAATTGGACCGCCAATAAAACGGCGAGCAGGATTGAGGATAAAGCAGGCTGGTAGAGGCTCATACAGGGGAAGCTAG
Protein sequenceShow/hide protein sequence
MSRPVVLKALVFQVLPPSVAVAFLFPSPSVKFGVKTRKGKNMQENVDQGVEFLCDSRRFFRSKSFKSVSFWFNLALVRVICGGSARKRALTVAVLVLNGVGMGTDPLLSP
AIGPPIKRRAGLRIKQAGRGSYRGS