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CmoCh17G012020 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012020
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpalmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like
Genome locationCmo_Chr17:9631245..9632721
RNA-Seq ExpressionCmoCh17G012020
SyntenyCmoCh17G012020
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009979 - 16:0 monogalactosyldiacylglycerol desaturase activity (molecular function)
GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water (molecular function)
InterPro domainsIPR015876 - Acyl-CoA desaturase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575951.1 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5196.97Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFV+SLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

XP_022953327.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]1.5e-4486.87Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCP YF NFEKVERN FMFF+K+  PDNVRDLEKQWFYRFM KTYWLHPLALA LL+A+GGVPYVIWGMCVRFVLSLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

XP_022953867.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita moschata]9.8e-5298.99Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

XP_022992040.1 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like [Cucurbita maxima]4.9e-5195.96Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYA GG+PYVIWGMCVRFVLSLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

XP_023549408.1 delta-9 acyl-lipid desaturase 2-like [Cucurbita pepo subsp. pepo]1.4e-5094.95Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFM KTYWLHPLALAGLLYAVGGVPYVIWGMCVRFV+SLH+TSM+NS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

TrEMBL top hitse value%identityAlignment
A0A0A0KAB1 FA_desaturase domain-containing protein2.4e-4381.82Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYF N++KVERN+FMF+MKHGYPDNV DLEKQ FYRF+ KTYWLHPLAL+ LLYA+GG+P++IWGMCVRFV SLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

A0A6J1GMY0 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like7.4e-4586.87Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCP YF NFEKVERN FMFF+K+  PDNVRDLEKQWFYRFM KTYWLHPLALA LL+A+GGVPYVIWGMCVRFVLSLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

A0A6J1GPG5 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like4.8e-5298.99Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

A0A6J1JUL6 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic-like2.4e-5195.96Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYA GG+PYVIWGMCVRFVLSLH+TSMVNS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

A0A6J1JX80 delta-9 acyl-lipid desaturase 2-like9.0e-4381.82Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        M WFFDSYNLTRKVCP+YFK FEKVERN FMFF+K+  PDNVRDLEKQWFYRFM KTYWLHPLAL+ LL+A+GGVP+VIWGMCVRFV+SLH+TSM+NS+
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

SwissProt top hitse value%identityAlignment
P0DOW2 Acyl-CoA C20 Delta5-desaturase2.8e-0932.71Show/hide
Query:  WFFDSYNLTRKVCPNYFKNFEKVERNMF--MFFM--------KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHI
        W+  ++    K    Y      +E   F  +F++        K G  +N  DL KQ +YRF+ +T+  H    A LLY  GG P+++WGM VR +L  H+
Subjt:  WFFDSYNLTRKVCPNYFKNFEKVERNMF--MFFM--------KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHI

Query:  TSMVNSI
        + +VNS+
Subjt:  TSMVNSI

Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic6.9e-1646.94Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS
        M W FD+  +T++                       G P+NV DLEKQ FYRF+R TY LHPLALA  LYA+GG P+++WGM VR V   HIT +VNS
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS

Q9FV68 Icosanoyl-CoA 5-desaturase (Fragment)5.5e-1355.56Show/hide
Query:  GYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        G  +NV DL+KQ FYRF++KTY  H LAL  LLY VGG PY++WGM  R V   H T  +NS+
Subjt:  GYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

Q9LND8 Delta-9 desaturase-like 2 protein1.1e-0848.44Show/hide
Query:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS
        K G  +NV DL++QWFYRF++KT  LH LA   L+Y  GG+PY+ W +    V+  H T +VNS
Subjt:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS

Q9SID2 Delta-9 acyl-lipid desaturase 24.3e-1046.15Show/hide
Query:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        K G   NV DL++QWFYRF++KT   H L L   L+ +GG+ +V WGM V   L +H+T ++NS+
Subjt:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

Arabidopsis top hitse value%identityAlignment
AT1G06100.1 Fatty acid desaturase family protein7.6e-1048.44Show/hide
Query:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS
        K G  +NV DL++QWFYRF++KT  LH LA   L+Y  GG+PY+ W +    V+  H T +VNS
Subjt:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS

AT1G06350.1 Fatty acid desaturase family protein9.9e-1046.88Show/hide
Query:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS
        K G  DNV DL+KQWFY+F+R+T  +H L    +LY  GG+PY+  G  V   +  H+T +VNS
Subjt:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS

AT2G31360.1 16:0delta9 desaturase 23.1e-1146.15Show/hide
Query:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        K G   NV DL++QWFYRF++KT   H L L   L+ +GG+ +V WGM V   L +H+T ++NS+
Subjt:  KHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI

AT3G15850.1 fatty acid desaturase 54.9e-1746.94Show/hide
Query:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS
        M W FD+  +T++                       G P+NV DLEKQ FYRF+R TY LHPLALA  LYA+GG P+++WGM VR V   HIT +VNS
Subjt:  MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNS

AT3G15870.1 Fatty acid desaturase family protein9.9e-1042.86Show/hide
Query:  GYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI
        G  +NV DL +Q FYRF+++T  LH +A + L Y  GG+P ++WG+ +   + LH+T +VNS+
Subjt:  GYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTGGTTTTTTGATTCGTATAACTTGACTAGAAAAGTGTGTCCGAACTATTTTAAGAACTTTGAAAAGGTGGAAAGAAACATGTTTATGTTCTTCATGAAGCATGG
ATATCCAGACAATGTCAGGGACTTGGAGAAACAATGGTTCTATAGGTTTATGCGTAAAACCTATTGGCTTCATCCATTGGCTCTGGCAGGGTTGCTGTATGCTGTTGGAG
GAGTTCCTTATGTCATATGGGGAATGTGCGTGAGGTTCGTATTGAGCTTGCATATAACATCTATGGTCAATTCGATCGAAATTCTTAGTATGTTTGACAACAACCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTGGTTTTTTGATTCGTATAACTTGACTAGAAAAGTGTGTCCGAACTATTTTAAGAACTTTGAAAAGGTGGAAAGAAACATGTTTATGTTCTTCATGAAGCATGG
ATATCCAGACAATGTCAGGGACTTGGAGAAACAATGGTTCTATAGGTTTATGCGTAAAACCTATTGGCTTCATCCATTGGCTCTGGCAGGGTTGCTGTATGCTGTTGGAG
GAGTTCCTTATGTCATATGGGGAATGTGCGTGAGGTTCGTATTGAGCTTGCATATAACATCTATGGTCAATTCGATCGAAATTCTTAGTATGTTTGACAACAACCGCTAA
Protein sequenceShow/hide protein sequence
MTWFFDSYNLTRKVCPNYFKNFEKVERNMFMFFMKHGYPDNVRDLEKQWFYRFMRKTYWLHPLALAGLLYAVGGVPYVIWGMCVRFVLSLHITSMVNSIEILSMFDNNR