; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G012050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9651948..9652406
RNA-Seq ExpressionCmoCh17G012050
SyntenyCmoCh17G012050
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953903.1 S-protein homolog 1-like [Cucurbita moschata]5.9e-87100Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

XP_022991765.1 S-protein homolog 1-like [Cucurbita maxima]2.3e-7585.53Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIRNVAAL L+TVS VGAQL+VE EK+KL+PQI  YTIHLVNDLKV GIMVHCKSRDDDLGVHY+ HRGDDYHFGFKVNVW++TLFWC+VEKQNAY+SFE
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFWTE+ H WLRDRC+DG VGTCIWKVKDDGIYLRNNAANTEEL+HTWIITR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

XP_023549414.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]5.7e-7486.27Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEK-IKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF
        MIRNVAAL LMTVSLVGAQLEVE EK IKLEP+I  Y IHLVNDLKV GIMVHCKSRDDDLGVHY+PHRGDDYHFGF VNVW++TLFWC+VEKQN Y+SF
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEK-IKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF

Query:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        E FWTE+RH WLRDRC+DG+VGTCIWKVKDDGIYLRNNAANTEELVHTWII R
Subjt:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

XP_023549416.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.8e-7587.5Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIRNVAALFLMTVSLVGAQLEVE E  K EPQI  Y+IHLVNDL+V GIMVHCKSRDDDLGVH +PHRGDDYHFGFK+N+WE+TLFWCRVEKQNAY+SFE
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFW E   RWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

XP_023549418.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]2.0e-7486.93Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEK-IKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF
        MIRNVAAL LMTVSLVGAQLEVE EK IKLEP+I  Y IHLVNDLKV GIMVHCKSRDDDLGVHY+PHRGDDYHFGF VNVW++TLFWC+VEKQNAY+SF
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEK-IKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF

Query:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        E FWTE+RH WLRDRC+DG+VGTCIWKVKDDGIYLRNNAANTEELVHTWII R
Subjt:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

TrEMBL top hitse value%identityAlignment
A0A6J1GPJ8 S-protein homolog2.1e-6169.74Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIR VAAL L+TVSLVGA LEVEFEKI ++P ++RY IH VNDL + G+MVHC+S+DDDLGVH++ +RGD+Y F F+VN W TTLFWC V++ +A+VSF+
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFW E R  WLRDRC+DGNVGTCIWK KDDG+YLRNNAANT+ELVH W  TR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

A0A6J1GPL3 S-protein homolog3.9e-6878.67Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLE-PQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF
        MIRNVAALFL+ V LVGAQLEVE EKI +E P+I+ Y IHLVNDL+V GI VHCKS+DDDLGVH +PHRGDDYHF FK+NVW++TLFWCRVEKQNAY+SF
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLE-PQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF

Query:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI
        ECFWTE+ HRWLR+RC+DG+VGTC WK KDDGIYLR+N+ANT+ELVHTWI
Subjt:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI

A0A6J1GPL8 S-protein homolog2.9e-87100Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

A0A6J1GR91 S-protein homolog1.5e-6778Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLE-PQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF
        MIRNVAALFL+ V LVGAQLEVE EKI +E P+I+ Y IHLVNDL+V GI VHCKS+D+DLGVH +PHRGDDYHF FK+NVW++TLFWCRVEKQNAY+SF
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLE-PQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSF

Query:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI
        ECFWTE+ HRWLR+RC+DG+VGTC WK KDDGIYLR+N+ANT+ELVHTWI
Subjt:  ECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI

A0A6J1JTV9 S-protein homolog1.1e-7585.53Show/hide
Query:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        MIRNVAAL L+TVS VGAQL+VE EK+KL+PQI  YTIHLVNDLKV GIMVHCKSRDDDLGVHY+ HRGDDYHFGFKVNVW++TLFWC+VEKQNAY+SFE
Subjt:  MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR
        CFWTE+ H WLRDRC+DG VGTCIWKVKDDGIYLRNNAANTEEL+HTWIITR
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 69.4e-1128.47Show/hide
Query:  LFLMTVSLVGAQ-LEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEM
        +F++ +SL+G + L+ + +   ++  +TR  I+  ND   + + VHCKSRDDD G H +  +G  Y + F VN   +TL++C   ++         +  +
Subjt:  LFLMTVSLVGAQ-LEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEM

Query:  RHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWII
        R      RC++     C W+ K+DGIY          L + W++
Subjt:  RHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWII

F4JLS0 S-protein homolog 19.0e-1433.61Show/hide
Query:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD
        P+I+ + + +VN L     + +HCKS++DDLG   +  R + + + F  N+  +T FWC + K N +++   FW ++    L  RC   N   CIW  K 
Subjt:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD

Query:  DGIYLRNNAANTEELVHTW
        DG+YL N+A+  + L   W
Subjt:  DGIYLRNNAANTEELVHTW

O23020 S-protein homolog 54.2e-1136.14Show/hide
Query:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDG
        + +HCKS+ DDLG+H +P +  +YHF F+ N+W++TLF+C  +  + + SF+ +  +      RD+   G    C W++K DG
Subjt:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDG

P0DN92 S-protein homolog 245.1e-0930.99Show/hide
Query:  LMTVSLVGAQ-LEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEK-QNAYVSFECFWTEMR
        ++ +SL+ ++ L+++  K  +   +TR TI   ND   + + +HCKSRDDDLG H +  +G+ + + F VN   +TL++C   + Q     FE +     
Subjt:  LMTVSLVGAQ-LEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEK-QNAYVSFECFWTEMR

Query:  HRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI
         R  RD  +  N   C WK + DGIY  +       L + W+
Subjt:  HRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI

Q2HQ46 S-protein homolog 742.2e-1231.09Show/hide
Query:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD
        P+I+ + + + N L     + +HCKS+++DLG   +    D + + F  N+  +TLFWC + K + +++ + FW ++    L  RC   N   C+W  K+
Subjt:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD

Query:  DGIYLRNNAANTEELVHTW
        DG+YL N+A   + L   W
Subjt:  DGIYLRNNAANTEELVHTW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family3.0e-1236.14Show/hide
Query:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDG
        + +HCKS+ DDLG+H +P +  +YHF F+ N+W++TLF+C  +  + + SF+ +  +      RD+   G    C W++K DG
Subjt:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDG

AT4G16295.1 S-protein homologue 16.4e-1533.61Show/hide
Query:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD
        P+I+ + + +VN L     + +HCKS++DDLG   +  R + + + F  N+  +T FWC + K N +++   FW ++    L  RC   N   CIW  K 
Subjt:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD

Query:  DGIYLRNNAANTEELVHTW
        DG+YL N+A+  + L   W
Subjt:  DGIYLRNNAANTEELVHTW

AT4G29035.1 Plant self-incompatibility protein S1 family1.6e-1331.09Show/hide
Query:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD
        P+I+ + + + N L     + +HCKS+++DLG   +    D + + F  N+  +TLFWC + K + +++ + FW ++    L  RC   N   C+W  K+
Subjt:  PQITRYTIHLVNDLKV-FGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKD

Query:  DGIYLRNNAANTEELVHTW
        DG+YL N+A   + L   W
Subjt:  DGIYLRNNAANTEELVHTW

AT5G04350.1 Plant self-incompatibility protein S1 family1.8e-0932.97Show/hide
Query:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEK------QNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIY
        + VHC+S+DDDLG H +   G DY F F  N+W+TT F C++++         +V++E  W++                +C W  ++DGIY
Subjt:  IMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEK------QNAYVSFECFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIY

AT5G06030.1 Plant self-incompatibility protein S1 family1.4e-0926.17Show/hide
Query:  VAALFLMTVSLV----GAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE
        V ++F+M++ ++       L+++  K      +TR TI   ND   + + +HCKSRDDDLG H +  +G+ + + F VN   +TL +C   ++       
Subjt:  VAALFLMTVSLV----GAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFE

Query:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI
          +   R  +   RC       C WK + DG +   +      L + W+
Subjt:  CFWTEMRHRWLRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGGAATGTGGCTGCATTGTTTCTCATGACGGTAAGTTTGGTCGGGGCTCAGCTCGAGGTTGAGTTTGAGAAGATCAAGTTAGAGCCTCAAATTACCCGTTATAC
CATTCATTTGGTTAATGATTTGAAAGTCTTTGGTATAATGGTGCACTGCAAGTCGAGGGATGATGATTTGGGAGTTCATTACATGCCTCATCGGGGAGATGATTACCATT
TTGGTTTTAAGGTTAATGTTTGGGAAACAACTCTCTTTTGGTGCAGAGTGGAAAAGCAAAATGCATACGTCTCTTTTGAATGCTTTTGGACAGAAATGCGCCACAGATGG
CTTCGTGATAGATGCAAAGATGGAAATGTGGGAACTTGTATCTGGAAGGTTAAAGACGATGGAATTTACTTGAGAAACAATGCAGCCAACACTGAAGAATTGGTTCATAC
TTGGATCATTACGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGGAATGTGGCTGCATTGTTTCTCATGACGGTAAGTTTGGTCGGGGCTCAGCTCGAGGTTGAGTTTGAGAAGATCAAGTTAGAGCCTCAAATTACCCGTTATAC
CATTCATTTGGTTAATGATTTGAAAGTCTTTGGTATAATGGTGCACTGCAAGTCGAGGGATGATGATTTGGGAGTTCATTACATGCCTCATCGGGGAGATGATTACCATT
TTGGTTTTAAGGTTAATGTTTGGGAAACAACTCTCTTTTGGTGCAGAGTGGAAAAGCAAAATGCATACGTCTCTTTTGAATGCTTTTGGACAGAAATGCGCCACAGATGG
CTTCGTGATAGATGCAAAGATGGAAATGTGGGAACTTGTATCTGGAAGGTTAAAGACGATGGAATTTACTTGAGAAACAATGCAGCCAACACTGAAGAATTGGTTCATAC
TTGGATCATTACGAGATAA
Protein sequenceShow/hide protein sequence
MIRNVAALFLMTVSLVGAQLEVEFEKIKLEPQITRYTIHLVNDLKVFGIMVHCKSRDDDLGVHYMPHRGDDYHFGFKVNVWETTLFWCRVEKQNAYVSFECFWTEMRHRW
LRDRCKDGNVGTCIWKVKDDGIYLRNNAANTEELVHTWIITR