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CmoCh17G012060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9652894..9654138
RNA-Seq ExpressionCmoCh17G012060
SyntenyCmoCh17G012060
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014486.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-3848Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPP-LSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFV
        MIR VAAL LV V  VGA LEVE EKIN++PP +S Y IH VNDL +LG+ VHC+SKDDDLGVH+L +RGD+Y F+F++N W++TLFWC V++ +A    
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPP-LSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFV

Query:  FFISFQIL-----------------------------IFLLAQ-----------VPPPVPITYNVHVVNGLSNLALVVHCQSKDDDLGIHNLTNRRDEYK
         +ISF+                               I+L              +  P P  Y VHVVNGLS L L VHCQSKDDDLGIH+L NR D+++
Subjt:  FFISFQIL-----------------------------IFLLAQ-----------VPPPVPITYNVHVVNGLSNLALVVHCQSKDDDLGIHNLTNRRDEYK

XP_022953902.1 S-protein homolog 6-like [Cucurbita moschata]1.5e-4894.29Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF
        MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAH    
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF

Query:  FISFQ
         +SFQ
Subjt:  FISFQ

XP_022953903.1 S-protein homolog 1-like [Cucurbita moschata]5.9e-2963.92Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL
        MIR VAAL L+TVSLVGA LEVEFEKI ++P ++RY IH VNDL + G+MVHC+S+DDDLGVH++ +RGD+Y F F+VN W TTLFWC V++ +A++
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL

XP_022991763.1 S-protein homolog 5-like [Cucurbita maxima]9.1e-3068.04Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL
        MIR VAALLLVTV LVGA  EVE +KINI+P +S+YYIH +NDLSI  M VHC+S DDDLG+HH L +G++YQFNF++NFW+TTLFWC VDRP+ ++
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL

XP_023549413.1 S-protein homolog 6-like [Cucurbita pepo subsp. pepo]5.3e-4690.48Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF
        MIRIVAALLLVTVSLVGAHLEVE EKINIKPPLSRYYIHFVNDLS+LGMMVHCQSKDDDLGV+HLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDA+    
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF

Query:  FISFQ
         +SFQ
Subjt:  FISFQ

TrEMBL top hitse value%identityAlignment
A0A6J1GPD2 S-protein homolog5.4e-2860.95Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF
        MIR VAALLLVTV LVGA  EV+ +KINI+P +S+YY+H +NDLS   M VHC+S DDDLG HH L++G+++QF+F++NFW+TTLFWC V++P+A     
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF

Query:  FISFQ
        +ISFQ
Subjt:  FISFQ

A0A6J1GPJ8 S-protein homolog7.2e-4994.29Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF
        MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAH    
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVF

Query:  FISFQ
         +SFQ
Subjt:  FISFQ

A0A6J1GPL8 S-protein homolog2.8e-2963.92Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL
        MIR VAAL L+TVSLVGA LEVEFEKI ++P ++RY IH VNDL + G+MVHC+S+DDDLGVH++ +RGD+Y F F+VN W TTLFWC V++ +A++
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL

A0A6J1JTV9 S-protein homolog3.1e-2862.89Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL
        MIR VAALLLVTVS VGA L+VE EK+ +KP +  Y IH VNDL +LG+MVHC+S+DDDLGVH+L +RGD+Y F F+VN W++TLFWC V++ +A++
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL

A0A6J1JX75 S-protein homolog4.4e-3068.04Show/hide
Query:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL
        MIR VAALLLVTV LVGA  EVE +KINI+P +S+YYIH +NDLSI  M VHC+S DDDLG+HH L +G++YQFNF++NFW+TTLFWC VDRP+ ++
Subjt:  MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHL

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.5e-0637.5Show/hide
Query:  LLLVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        + +V +SL+G   L+ + +   +K PL+R  I+  ND  +LG  VHC+S+DDD G  H+L +G  Y + F VNF  +TL++C   +      VF I
Subjt:  LLLVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI

P0DN92 S-protein homolog 241.2e-0536.17Show/hide
Query:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        +V +SL+ +  L+++  K  I+  L+R  I   ND  +LG  +HC+S+DDDLG  H+L +G+ + + F VNF  +TL++C   +      VF I
Subjt:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI

Q9FI83 S-protein homolog 284.7e-0532.98Show/hide
Query:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        +V +SL+ +  L+++  K   +  L+R  I   ND     + +HC+S+DDDLG  H+L +G+ + + F VNF  +TL +C   +   +  VF I
Subjt:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI

Q9FI84 S-protein homolog 279.5e-0639.74Show/hide
Query:  EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        E   I+ PL+R  +   ND  +LG  +HC+SKDDDLG  H+   G+ Y + F VNF  +TL++C   +   +  VF I
Subjt:  EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI

Q9LW22 S-protein homolog 212.8e-0538.33Show/hide
Query:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQIL
        + VHC+SK++D+GV + L  G+   F+F+ NFW TT FWC++ + PD   +    ++Q +
Subjt:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQIL

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family5.7e-0643.64Show/hide
Query:  IHFVNDL----SILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWC
        +H  NDL        + V C+S   D+G H+ +  G  YQF+ R NFW+TTLFWC
Subjt:  IHFVNDL----SILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWC

AT3G26880.1 Plant self-incompatibility protein S1 family2.0e-0638.33Show/hide
Query:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQIL
        + VHC+SK++D+GV + L  G+   F+F+ NFW TT FWC++ + PD   +    ++Q +
Subjt:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQIL

AT5G04350.1 Plant self-incompatibility protein S1 family8.0e-0843.1Show/hide
Query:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQ
        + VHC+SKDDDLG  H+L  G +Y+F F  N W+TT F C +D+ P+    + F++++
Subjt:  MMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDR-PDAHLFVFFISFQ

AT5G06020.1 Plant self-incompatibility protein S1 family6.7e-0739.74Show/hide
Query:  EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        E   I+ PL+R  +   ND  +LG  +HC+SKDDDLG  H+   G+ Y + F VNF  +TL++C   +   +  VF I
Subjt:  EKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI

AT5G06030.1 Plant self-incompatibility protein S1 family3.3e-0632.98Show/hide
Query:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI
        +V +SL+ +  L+++  K   +  L+R  I   ND     + +HC+S+DDDLG  H+L +G+ + + F VNF  +TL +C   +   +  VF I
Subjt:  LVTVSLVGAH-LEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGGATTGTGGCTGCATTGTTGCTAGTGACGGTGAGTTTGGTCGGGGCTCACCTCGAGGTTGAGTTTGAGAAGATCAATATAAAGCCGCCACTTTCCAGGTATTA
CATTCATTTCGTTAACGATCTAAGCATCCTTGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGTTCATCATTTGCTTAATCGAGGAGATAATTACCAAT
TTAACTTTAGGGTTAACTTTTGGAGAACAACCCTCTTTTGGTGTGATGTGGATAGGCCGGATGCACACTTGTTTGTATTTTTTATCTCTTTCCAAATATTGATATTTTTG
TTGGCTCAAGTACCTCCACCGGTACCTATAACGTATAATGTTCATGTTGTTAATGGGCTAAGCAACCTCGCGTTGGTGGTGCATTGTCAGTCCAAAGATGACGATTTAGG
AATTCACAATTTGACTAATCGTAGAGATGAATACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGGATTGTGGCTGCATTGTTGCTAGTGACGGTGAGTTTGGTCGGGGCTCACCTCGAGGTTGAGTTTGAGAAGATCAATATAAAGCCGCCACTTTCCAGGTATTA
CATTCATTTCGTTAACGATCTAAGCATCCTTGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGTTCATCATTTGCTTAATCGAGGAGATAATTACCAAT
TTAACTTTAGGGTTAACTTTTGGAGAACAACCCTCTTTTGGTGTGATGTGGATAGGCCGGATGCACACTTGTTTGTATTTTTTATCTCTTTCCAAATATTGATATTTTTG
TTGGCTCAAGTACCTCCACCGGTACCTATAACGTATAATGTTCATGTTGTTAATGGGCTAAGCAACCTCGCGTTGGTGGTGCATTGTCAGTCCAAAGATGACGATTTAGG
AATTCACAATTTGACTAATCGTAGAGATGAATACAAATGA
Protein sequenceShow/hide protein sequence
MIRIVAALLLVTVSLVGAHLEVEFEKINIKPPLSRYYIHFVNDLSILGMMVHCQSKDDDLGVHHLLNRGDNYQFNFRVNFWRTTLFWCDVDRPDAHLFVFFISFQILIFL
LAQVPPPVPITYNVHVVNGLSNLALVVHCQSKDDDLGIHNLTNRRDEYK