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CmoCh17G012070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9682007..9682281
RNA-Seq ExpressionCmoCh17G012070
SyntenyCmoCh17G012070
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953902.1 S-protein homolog 6-like [Cucurbita moschata]3.6e-2188.06Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN
        MI+IVAALLLVTVSLVGA+LEVE EKINIKPPL RYYIHFVNDLSILGMMVHCQSKDDDLG   L N
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN

XP_022991765.1 S-protein homolog 1-like [Cucurbita maxima]3.3e-1465.67Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN
        MI+ VAALLLVTVS VGA L+VESEK+ +KP +F Y IH VNDL +LG+MVHC+S+DDDLG   L +
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN

XP_023549413.1 S-protein homolog 6-like [Cucurbita pepo subsp. pepo]1.2e-2193.44Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+IVAALLLVTVSLVGA+LEVESEKINIKPPL RYYIHFVNDLS+LGMMVHCQSKDDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG

XP_023549414.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]8.1e-1370.97Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEK-INIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+ VAALLL+TVSLVGA LEVESEK I ++P +F Y IH VNDL +LG+MVHC+S+DDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEK-INIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG

XP_023549418.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]8.1e-1370.97Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEK-INIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+ VAALLL+TVSLVGA LEVESEK I ++P +F Y IH VNDL +LG+MVHC+S+DDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEK-INIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG

TrEMBL top hitse value%identityAlignment
A0A6J1GPJ8 S-protein homolog1.8e-2188.06Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN
        MI+IVAALLLVTVSLVGA+LEVE EKINIKPPL RYYIHFVNDLSILGMMVHCQSKDDDLG   L N
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN

A0A6J1GPL3 S-protein homolog1.9e-1269.35Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPP-LFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+ VAAL LV V LVGA LEVESEKIN++PP +  Y IH VNDL +LG+ VHC+SKDDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPP-LFRYYIHFVNDLSILGMMVHCQSKDDDLG

A0A6J1GPL8 S-protein homolog8.7e-1367.21Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+ VAAL L+TVSLVGA LEVE EKI ++P + RY IH VNDL + G+MVHC+S+DDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG

A0A6J1JTV9 S-protein homolog1.6e-1465.67Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN
        MI+ VAALLLVTVS VGA L+VESEK+ +KP +F Y IH VNDL +LG+MVHC+S+DDDLG   L +
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLEN

A0A6J1JX75 S-protein homolog8.7e-1370.49Show/hide
Query:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG
        MI+ VAALLLVTV LVGA  EVES+KINI+P + +YYIH +NDLSI  M VHC+S DDDLG
Subjt:  MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAGATTGTGGCTGCATTGTTGCTGGTGACGGTGAGTTTGGTCGGGGCTTACCTCGAGGTTGAGTCTGAGAAGATCAATATAAAGCCGCCACTTTTCAGGTATTA
CATTCATTTCGTGAATGATCTAAGTATCCTCGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGGTCAACTTTTGGAGAACAACCCTCTTTTGGTGCCAA
GTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAAGATTGTGGCTGCATTGTTGCTGGTGACGGTGAGTTTGGTCGGGGCTTACCTCGAGGTTGAGTCTGAGAAGATCAATATAAAGCCGCCACTTTTCAGGTATTA
CATTCATTTCGTGAATGATCTAAGTATCCTCGGTATGATGGTGCACTGCCAGTCGAAGGACGATGATTTGGGAGGTCAACTTTTGGAGAACAACCCTCTTTTGGTGCCAA
GTGAATAG
Protein sequenceShow/hide protein sequence
MIKIVAALLLVTVSLVGAYLEVESEKINIKPPLFRYYIHFVNDLSILGMMVHCQSKDDDLGGQLLENNPLLVPSE