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CmoCh17G012080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9684046..9684985
RNA-Seq ExpressionCmoCh17G012080
SyntenyCmoCh17G012080
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022953901.1 S-protein homolog 5-like [Cucurbita moschata]1.4e-2173.68Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIR VAALLL+TV LVGAQ EV+S+K  I+  ISKYY+HLINDLS PDMT+HC+S DDDLG HHL KGED+QF+FK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

XP_022991763.1 S-protein homolog 5-like [Cucurbita maxima]7.0e-2684.21Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIRNVAALLL+TV LVGAQ EVES+K  IQ  ISKYYIHLINDLSIPDMT+HC+S DDDLGIHHL+KGEDYQFNFK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

XP_023539378.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]6.8e-2183.87Show/hide
Query:  LVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        LVGAQ +VESEK  IQ  ISKYYIHLINDLSIPDMT+HC+S DDDLGIHHL+KGEDYQFNFK
Subjt:  LVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

XP_023548645.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]5.6e-2376.32Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIRNVAALLL+TV LVGAQ EVES+K  I+  ISKYY+HLINDLS PDMT+HC+S D+DLG HHL KGED+QFNFK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

XP_023549415.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]6.4e-2784.21Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIRNVAALLL+TVCLV AQ EVESEK  +Q PISKYYIHLINDLSI DMT+HC+S DDDLGIHHL KGEDYQFNFK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

TrEMBL top hitse value%identityAlignment
A0A6J1EYL3 S-protein homolog2.4e-1971.79Show/hide
Query:  MIRNVAALLLLTV--CLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNF
        MIRNVAALLL+TV   LVGAQ EVESEKT +Q PIS+Y+IH +NDLSIPDMT+HC++ D+DLGIH  L+ G+DYQFNF
Subjt:  MIRNVAALLLLTV--CLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNF

A0A6J1GPD2 S-protein homolog6.7e-2273.68Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIR VAALLL+TV LVGAQ EV+S+K  I+  ISKYY+HLINDLS PDMT+HC+S DDDLG HHL KGED+QF+FK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

A0A6J1GPJ8 S-protein homolog6.9e-1966.23Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNFK
        MIR VAALLL+TV LVGA  EVE EK  I+ P+S+YYIH +NDLSI  M +HCQS+DDDLG+HH L +G++YQFNF+
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNFK

A0A6J1JVQ8 S-protein homolog1.8e-1973.08Show/hide
Query:  MIRNVAALLLLTV--CLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNF
        MIRNVAALLL+TV   LV AQ E ESEKT +Q PISKY+IHL+NDLSIPDMT+HC+S D+DLGI+H L+ G+DYQFNF
Subjt:  MIRNVAALLLLTV--CLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHH-LRKGEDYQFNF

A0A6J1JX75 S-protein homolog3.4e-2684.21Show/hide
Query:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK
        MIRNVAALLL+TV LVGAQ EVES+K  IQ  ISKYYIHLINDLSIPDMT+HC+S DDDLGIHHL+KGEDYQFNFK
Subjt:  MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04350.1 Plant self-incompatibility protein S1 family8.1e-0455.56Show/hide
Query:  MTLHCQSRDDDLGIHHLRKGEDYQFNF
        + +HC+S+DDDLG H L+ G+DY+F F
Subjt:  MTLHCQSRDDDLGIHHLRKGEDYQFNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGGAATGTGGCTGCATTGTTGCTCTTGACGGTTTGTTTGGTCGGGGCTCAGTCCGAGGTTGAGTCTGAGAAGACCACTATACAACTGCCAATTTCCAAGTATTA
CATTCATTTGATTAACGATCTAAGCATCCCTGATATGACGTTGCACTGCCAGTCGCGCGATGATGATTTAGGAATTCATCATTTACGGAAGGGAGAGGATTACCAATTTA
ACTTTAAAAGCTACTCGTTAGTTACGGAACCTGGTGCATTATTCCAAGAGTACTCTAAAGTTCTTTCGCCGAAGTATAGTTCAGAATCATCTCCAAATCTTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGGAATGTGGCTGCATTGTTGCTCTTGACGGTTTGTTTGGTCGGGGCTCAGTCCGAGGTTGAGTCTGAGAAGACCACTATACAACTGCCAATTTCCAAGTATTA
CATTCATTTGATTAACGATCTAAGCATCCCTGATATGACGTTGCACTGCCAGTCGCGCGATGATGATTTAGGAATTCATCATTTACGGAAGGGAGAGGATTACCAATTTA
ACTTTAAAAGCTACTCGTTAGTTACGGAACCTGGTGCATTATTCCAAGAGTACTCTAAAGTTCTTTCGCCGAAGTATAGTTCAGAATCATCTCCAAATCTTAGTTAG
Protein sequenceShow/hide protein sequence
MIRNVAALLLLTVCLVGAQSEVESEKTTIQLPISKYYIHLINDLSIPDMTLHCQSRDDDLGIHHLRKGEDYQFNFKSYSLVTEPGALFQEYSKVLSPKYSSESSPNLS