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CmoCh17G012100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9694824..9695493
RNA-Seq ExpressionCmoCh17G012100
SyntenyCmoCh17G012100
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014486.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3797.53Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFLVMVG VGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKIN+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
XP_022953898.1 S-protein homolog 1-like [Cucurbita moschata]1.4e-3798.77Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKIN+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
XP_022953904.1 S-protein homolog 74-like [Cucurbita moschata]5.2e-3797.53Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKD+DLGVHNLPHRGDDYHFSFKIN+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
XP_023549414.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]8.2e-2777.78Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAAL L+ V LVGAQLEVESEK     PRI SYNIHLVNDL+VLGI VHCKS+DDDLGVH LPHRGDDYHF F +N+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
XP_023549416.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]2.2e-2781.48Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFL+ V LVGAQLEVESE  N   P+I SY+IHLVNDL+VLGI VHCKS+DDDLGVHNLPHRGDDYHF FKINI
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
TrEMBL top hitse value%identityAlignment
A0A6J1GPJ8 S-protein homolog3.3e-2167.5Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKIN
        MIR VAAL LV V LVGA LEVE EKIN++PP +S Y IH VNDL +LG+ VHC+SKDDDLGVH+L +RGD+Y F+F++N
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKIN
A0A6J1GPL3 S-protein homolog6.6e-3898.77Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKIN+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
A0A6J1GPL8 S-protein homolog2.6e-2675.31Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFL+ V LVGAQLEVE EKI +E P+I+ Y IHLVNDL+V GI VHCKS+DDDLGVH +PHRGDDYHF FK+N+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
A0A6J1GR91 S-protein homolog2.5e-3797.53Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKD+DLGVHNLPHRGDDYHFSFKIN+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
A0A6J1JTV9 S-protein homolog3.7e-2574.07Show/hide
Query:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        MIRNVAAL LV V  VGAQL+VESEK+ ++ P+I SY IHLVNDL+VLGI VHCKS+DDDLGVH L HRGDDYHF FK+N+
Subjt:  MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
SwissProt top hitse value%identityAlignment
O23020 S-protein homolog 56.0e-0453.12Show/hide
Query:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        +T+HCKSK DDLG+H +P +  +YHF F+ N+
Subjt:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.2e-0553.12Show/hide
Query:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        +T+HCKSK DDLG+H +P +  +YHF F+ N+
Subjt:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
AT1G26796.1 Plant self-incompatibility protein S1 family6.1e-0438.78Show/hide
Query:  SSYNIHLVNDLQVLG-ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINIQ
        S  ++ ++N L  L  + VHC++K DDLGV +L H    +HF F++N++
Subjt:  SSYNIHLVNDLQVLG-ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINIQ
AT2G06090.1 Plant self-incompatibility protein S1 family2.8e-0453.12Show/hide
Query:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI
        +TVHCKSKDDDLG+H +  R  +Y+F F+ ++
Subjt:  ITVHCKSKDDDLGVHNLPHRGDDYHFSFKINI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAGGAATGTGGCTGCATTGTTTCTCGTGATGGTAGGTTTGGTCGGGGCTCAGCTTGAAGTTGAGTCTGAGAAGATCAATGTAGAGCCTCCGCGAATATCCAGTTA
TAACATTCATTTGGTTAACGATCTACAAGTCCTTGGTATAACGGTGCACTGCAAGTCAAAGGATGATGATTTGGGAGTTCATAATTTGCCTCATCGGGGAGATGATTACC
ATTTTAGTTTTAAGATTAATATACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAGGAATGTGGCTGCATTGTTTCTCGTGATGGTAGGTTTGGTCGGGGCTCAGCTTGAAGTTGAGTCTGAGAAGATCAATGTAGAGCCTCCGCGAATATCCAGTTA
TAACATTCATTTGGTTAACGATCTACAAGTCCTTGGTATAACGGTGCACTGCAAGTCAAAGGATGATGATTTGGGAGTTCATAATTTGCCTCATCGGGGAGATGATTACC
ATTTTAGTTTTAAGATTAATATACAGTAA
Protein sequenceShow/hide protein sequence
MIRNVAALFLVMVGLVGAQLEVESEKINVEPPRISSYNIHLVNDLQVLGITVHCKSKDDDLGVHNLPHRGDDYHFSFKINIQ