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CmoCh17G012110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9695826..9696235
RNA-Seq ExpressionCmoCh17G012110
SyntenyCmoCh17G012110
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026247.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]4.5e-0656.25Show/hide
Query:  NMVILLLIMVTFARARVVTRITLLLPVPTTT-YNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        N+++L L+MV F +ARV   + + LP P+ T Y IHV+NGLSN  LIVHCQSKD+DLG  +L N
Subjt:  NMVILLLIMVTFARARVVTRITLLLPVPTTT-YNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

XP_022933254.1 S-protein homolog 1-like [Cucurbita moschata]6.5e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

XP_022933270.1 S-protein homolog 1-like [Cucurbita moschata]6.5e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

XP_022933281.1 S-protein homolog 1-like [Cucurbita moschata]6.5e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

XP_023549419.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]6.9e-1589.09Show/hide
Query:  MVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        MVTFA+ARVVTRITL  PVP TTYNIHVVNGL+NVGLIVHCQSKDNDLGT NLLN
Subjt:  MVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

TrEMBL top hitse value%identityAlignment
A0A5A7SNG3 S-protein homolog2.2e-0656.25Show/hide
Query:  NMVILLLIMVTFARARVVTRITLLLPVPTTT-YNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        N+++L L+MV F +ARV   + + LP P+ T Y IHV+NGLSN  LIVHCQSKD+DLG  +L N
Subjt:  NMVILLLIMVTFARARVVTRITLLLPVPTTT-YNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

A0A6J1EYM3 S-protein homolog3.1e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

A0A6J1EZ88 S-protein homolog3.1e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

A0A6J1F4F7 S-protein homolog3.1e-0553.85Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A+ V R+ L LP P + Y +HVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

A0A6J1IGD4 S-protein homolog4.1e-0556.92Show/hide
Query:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN
        I+N+V+  L  V    A  V RITL  P P + Y IHVVNGLS +GL+VHCQSKD+DLG   LLN
Subjt:  IRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGAAAACGATTAGAAACATGGTTATTTTGTTGCTCATCATGGTGACTTTTGCTCGAGCTCGAGTTGTTACAAGAATTACGTTACTTCTACCGGTACCTACAAC
TACTTATAACATTCATGTTGTTAATGGGCTAAGCAACGTCGGGTTAATTGTGCATTGCCAGTCGAAGGACAATGATTTGGGGACTTCCAATTTGCTTAATCCTTTTGGCC
TGAGTCAAAGAACAGATGGCTGCCTGGAAGGTGCAGAAATGGAGGAAATGGAGAAGAAGGAACTTGTAATTCCTTCTTATGATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGAAAACGATTAGAAACATGGTTATTTTGTTGCTCATCATGGTGACTTTTGCTCGAGCTCGAGTTGTTACAAGAATTACGTTACTTCTACCGGTACCTACAAC
TACTTATAACATTCATGTTGTTAATGGGCTAAGCAACGTCGGGTTAATTGTGCATTGCCAGTCGAAGGACAATGATTTGGGGACTTCCAATTTGCTTAATCCTTTTGGCC
TGAGTCAAAGAACAGATGGCTGCCTGGAAGGTGCAGAAATGGAGGAAATGGAGAAGAAGGAACTTGTAATTCCTTCTTATGATAACTAA
Protein sequenceShow/hide protein sequence
MFKKTIRNMVILLLIMVTFARARVVTRITLLLPVPTTTYNIHVVNGLSNVGLIVHCQSKDNDLGTSNLLNPFGLSQRTDGCLEGAEMEEMEKKELVIPSYDN