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CmoCh17G012120 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012120
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-protein homolog
Genome locationCmo_Chr17:9696502..9697584
RNA-Seq ExpressionCmoCh17G012120
SyntenyCmoCh17G012120
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902699.1 PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]3.1e-2561.96Show/hide
Query:  MREHF--FLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL
        M+ HF  F F+FVLSL + +    I  ERWHIHI+NGLS+ Q+LFVHC+SKDDDLG   LS G EFNW+F++NFW TTLFWCYL+K N +S+
Subjt:  MREHF--FLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]1.2e-2459.55Show/hide
Query:  REHFFLFVFVLSLTMFQSIN-FIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKS
        ++HF +F+ VLSL + + I  F + ++W IH++NGLS+GQ+LFVHCKSKD+DLG H+L+ G EFNW+FRVN W TTLFWCYL K + KS
Subjt:  REHFFLFVFVLSLTMFQSIN-FIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKS

XP_022143780.1 S-protein homolog 1-like [Momordica charantia]1.4e-2256.82Show/hide
Query:  EHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL
        +HF +F+FV SL + + I  +   +W IH+ N LS+ Q LFVHCKSK+DDLG H+LS G EFNW FRVN W TTL+WCYL+K N +S+
Subjt:  EHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]2.1e-2155.81Show/hide
Query:  MREHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        M++   + +FVL L + +    ++ E+WHIH++NGLS+GQ L  HCKSKD+DLG   L  G EFNW FRVNFW TTLFWCYL+K N
Subjt:  MREHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.9e-2260.47Show/hide
Query:  MREHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        M +   +  FVL L M       +  +W IH++NGLS+GQ LFVHCKSKD+DLG H LS GNEFNW FRVNFW TTLFWCYL+K N
Subjt:  MREHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog1.5e-2561.96Show/hide
Query:  MREHF--FLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL
        M+ HF  F F+FVLSL + +    I  ERWHIHI+NGLS+ Q+LFVHC+SKDDDLG   LS G EFNW+F++NFW TTLFWCYL+K N +S+
Subjt:  MREHF--FLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL

A0A6J1CPR8 S-protein homolog6.9e-2356.82Show/hide
Query:  EHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL
        +HF +F+FV SL + + I  +   +W IH+ N LS+ Q LFVHCKSK+DDLG H+LS G EFNW FRVN W TTL+WCYL+K N +S+
Subjt:  EHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSL

A0A6J1CQW3 S-protein homolog6.1e-1965.57Show/hide
Query:  RWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND
        +W + I+NGLS GQ+LF+HCKSKDDDLGIH+L+ G +F W+FR N WGTTLFWCY+RK ++
Subjt:  RWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND

A0A6J1CRU0 S-protein homolog5.7e-2559.55Show/hide
Query:  REHFFLFVFVLSLTMFQSIN-FIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKS
        ++HF +F+ VLSL + + I  F + ++W IH++NGLS+GQ+LFVHCKSKD+DLG H+L+ G EFNW+FRVN W TTLFWCYL K + KS
Subjt:  REHFFLFVFVLSLTMFQSIN-FIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKS

A0A6J1HAC3 S-protein homolog2.7e-1969.35Show/hide
Query:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        F +W IHI N LS+GQ++FVHCKSKD+DLG H L+ G EF W F+VNFW TTLFWCYLRK N
Subjt:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 14.3e-1450.85Show/hide
Query:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        W + ++NGL+ G++LF+HCKSK+DDLG  +L F N F+W+F  N   +T FWCY+ K N
Subjt:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

O23020 S-protein homolog 53.5e-0842.86Show/hide
Query:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLR-KSNDKSLIIY
        F R  +  +  L  G  L +HCKSK DDLGIH + F  E+++ F+ N W +TLF+C  +  S  KS  IY
Subjt:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLR-KSNDKSLIIY

Q2HQ46 S-protein homolog 743.1e-1247.46Show/hide
Query:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        W + + NGL+ G++LF+HCKSK++DLG  +L F + F+W+F  N   +TLFWCY+ K +
Subjt:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

Q9FI83 S-protein homolog 281.1e-0650Show/hide
Query:  LFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYL--RKSNDKSLIIY
        L +HCKS+DDDLG H L+ G  F W F VNF  +TL +C    R+ N    IIY
Subjt:  LFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYL--RKSNDKSLIIY

Q9LW22 S-protein homolog 215.5e-0940.96Show/hide
Query:  LFVFVLSLTMFQSINFIDFERWHIHILNGLS--HGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND
        +F+FV+ L M   I+ +  ++  I + N L+  +   L VHCKSK++D+G+  L  G   ++SF+ NFWGTT FWC L K  D
Subjt:  LFVFVLSLTMFQSINFIDFERWHIHILNGLS--HGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.5e-0942.86Show/hide
Query:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLR-KSNDKSLIIY
        F R  +  +  L  G  L +HCKSK DDLGIH + F  E+++ F+ N W +TLF+C  +  S  KS  IY
Subjt:  FERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLR-KSNDKSLIIY

AT3G26880.1 Plant self-incompatibility protein S1 family3.9e-1040.96Show/hide
Query:  LFVFVLSLTMFQSINFIDFERWHIHILNGLS--HGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND
        +F+FV+ L M   I+ +  ++  I + N L+  +   L VHCKSK++D+G+  L  G   ++SF+ NFWGTT FWC L K  D
Subjt:  LFVFVLSLTMFQSINFIDFERWHIHILNGLS--HGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSND

AT4G16295.1 S-protein homologue 13.1e-1550.85Show/hide
Query:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        W + ++NGL+ G++LF+HCKSK+DDLG  +L F N F+W+F  N   +T FWCY+ K N
Subjt:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

AT4G29035.1 Plant self-incompatibility protein S1 family2.2e-1347.46Show/hide
Query:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN
        W + + NGL+ G++LF+HCKSK++DLG  +L F + F+W+F  N   +TLFWCY+ K +
Subjt:  WHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSN

AT5G04350.1 Plant self-incompatibility protein S1 family5.6e-0937.97Show/hide
Query:  HFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYL
        + F+F  V+ L +  S  F +     + + N L H + L VHC+SKDDDLG H L  G ++ ++F  N W TT F C +
Subjt:  HFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGAGAGAGCACTTCTTCCTTTTCGTGTTTGTCTTGTCGTTAACAATGTTTCAGTCGATCAATTTTATTGACTTCGAAAGATGGCACATCCACATTTTGAATGG
GCTAAGCCATGGCCAAAGTTTGTTCGTCCACTGCAAATCGAAAGACGATGATTTGGGCATACATGATCTTAGTTTCGGAAATGAATTCAACTGGAGCTTTAGAGTAAACT
TTTGGGGTACGACGTTATTTTGGTGCTATTTGCGGAAGTCTAATGACAAATCTTTAATTATATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGAGAGAGCACTTCTTCCTTTTCGTGTTTGTCTTGTCGTTAACAATGTTTCAGTCGATCAATTTTATTGACTTCGAAAGATGGCACATCCACATTTTGAATGG
GCTAAGCCATGGCCAAAGTTTGTTCGTCCACTGCAAATCGAAAGACGATGATTTGGGCATACATGATCTTAGTTTCGGAAATGAATTCAACTGGAGCTTTAGAGTAAACT
TTTGGGGTACGACGTTATTTTGGTGCTATTTGCGGAAGTCTAATGACAAATCTTTAATTATATATTGA
Protein sequenceShow/hide protein sequence
MDMREHFFLFVFVLSLTMFQSINFIDFERWHIHILNGLSHGQSLFVHCKSKDDDLGIHDLSFGNEFNWSFRVNFWGTTLFWCYLRKSNDKSLIIY