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CmoCh17G012140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich protein 5-like
Genome locationCmo_Chr17:9702797..9703120
RNA-Seq ExpressionCmoCh17G012140
SyntenyCmoCh17G012140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575963.1 hypothetical protein SDJN03_26602, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3998.13Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
        MA+LLMALFLALM THALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG

Query:  GSGLTNP
        GSGLTNP
Subjt:  GSGLTNP

KAG7014487.1 hypothetical protein SDJN02_24665, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3698.04Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
        MA+LLMALFLALM THALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG

Query:  GS
        GS
Subjt:  GS

XP_022953896.1 glycine-rich protein 5-like [Cucurbita moschata]2.7e-38100Show/hide
Query:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT
        MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT
Subjt:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT

Query:  NP
        NP
Subjt:  NP

XP_023549421.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]9.4e-3997.2Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
        MA+LLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGG G GLGG
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG

Query:  GSGLTNP
        GSGLTNP
Subjt:  GSGLTNP

XP_038899239.1 glycine-rich protein 5-like [Benincasa hispida]9.4e-2372.65Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGI----------
        MA+L MAL LAL+ATHALARPT PD TFNDQKNFLTYGG+G+YSGIGSNGLPFGG+GGA+G  G LGGGLGG  GG  GLGGLGG+GGG           
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGI----------

Query:  GGGAGSGLGGGSGLTNP
        G GAG G+GGGSGLTNP
Subjt:  GGGAGSGLGGGSGLTNP

TrEMBL top hitse value%identityAlignment
A0A1S3CFV5 glycine-rich cell wall structural protein 1-like2.5e-2172.41Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVG--SGGDLGGGLGGPAGGIGGLGGL-----GGTGGGIGGG
        MA+L MAL LAL+ATHALARP  P  TF+DQKNFLTYGG+G YSGIGSNGLPFGG+GG VG    G LGGGLGG A GIGGLGGL     GG G G+GGG
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVG--SGGDLGGGLGGPAGGIGGLGGL-----GGTGGGIGGG

Query:  AGS--GLGGGSGLTNP
        AG   G+GGGSGLTNP
Subjt:  AGS--GLGGGSGLTNP

A0A1S3CGR1 acanthoscurrin-1-like3.3e-2173.83Show/hide
Query:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGS---GGDLGGGLGGPAGGIGGLGGLGGTGGGIG------GGAGS
        MAL LAL+ATHALARPTP D TF+DQKNFLTYGG+G YSGIGSNGLPFGG+GGA+G    GG LGGGLGG  G  GGLGGLGGTGGG+G      GG G 
Subjt:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGS---GGDLGGGLGGPAGGIGGLGGLGGTGGGIG------GGAGS

Query:  GLGGGSG
        GLGGG G
Subjt:  GLGGGSG

A0A5A7U5T7 Acanthoscurrin-1-like1.7e-2273.21Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGS---GGDLGGGLGGPAGGIGGLGGLGGTGGGIG------
        MA+L MAL LAL+ATHALARPTP D TF+DQKNFLTYGG+G YSGIGSNGLPFGG+GGA+G    GG LGGGLGG  G  GGLGGLGGTGGG+G      
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGS---GGDLGGGLGGPAGGIGGLGGLGGTGGGIG------

Query:  GGAGSGLGGGSG
        GG G GLGGG G
Subjt:  GGAGSGLGGGSG

A0A6J1GPC7 glycine-rich protein 5-like1.3e-38100Show/hide
Query:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT
        MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT
Subjt:  MALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLT

Query:  NP
        NP
Subjt:  NP

A0A6J1KVV3 acanthoscurrin-1-like1.5e-2174.76Show/hide
Query:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG
        MA+L MA+ LAL+ATHALARPTP DATF DQKNFLTYGG+G YSGIGSNGLPFGG+GGAVG     G G GG  GGIGGLGG GG G G+GGG G GLGG
Subjt:  MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGG

Query:  GSG
        G G
Subjt:  GSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G29030.1 Putative membrane lipoprotein2.4e-0853.21Show/hide
Query:  MAQLLMALFLALMATHAL---ARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAV-GSGGDLG-GGLGGPAGGIGGLGGLGGTGGGIGGGAG
        MA+    +FL      AL   AR  P     +DQKN+L YG  G YSG+G NGLPFGG+GG V G GG+LG GG GG  GG+G     GG GGG G G G
Subjt:  MAQLLMALFLALMATHAL---ARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAV-GSGGDLG-GGLGGPAGGIGGLGGLGGTGGGIGGGAG

Query:  SGLGGGSGL
         GLGGGSG+
Subjt:  SGLGGGSGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAATTGCTTATGGCTTTGTTTCTGGCTCTTATGGCCACTCACGCCCTGGCTAGACCTACGCCACCCGACGCCACCTTCAATGACCAAAAGAACTTCCTTACCTA
CGGTGGCATTGGTAGCTACTCTGGCATTGGCAGCAACGGCCTCCCCTTCGGTGGCATTGGCGGTGCAGTCGGATCAGGCGGCGATCTCGGTGGTGGACTAGGCGGCCCTG
CTGGAGGAATTGGTGGACTAGGTGGGTTGGGAGGAACCGGCGGTGGCATTGGAGGCGGAGCTGGCAGTGGTCTCGGTGGTGGCTCTGGTCTTACCAATCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAATTGCTTATGGCTTTGTTTCTGGCTCTTATGGCCACTCACGCCCTGGCTAGACCTACGCCACCCGACGCCACCTTCAATGACCAAAAGAACTTCCTTACCTA
CGGTGGCATTGGTAGCTACTCTGGCATTGGCAGCAACGGCCTCCCCTTCGGTGGCATTGGCGGTGCAGTCGGATCAGGCGGCGATCTCGGTGGTGGACTAGGCGGCCCTG
CTGGAGGAATTGGTGGACTAGGTGGGTTGGGAGGAACCGGCGGTGGCATTGGAGGCGGAGCTGGCAGTGGTCTCGGTGGTGGCTCTGGTCTTACCAATCCCTGA
Protein sequenceShow/hide protein sequence
MAQLLMALFLALMATHALARPTPPDATFNDQKNFLTYGGIGSYSGIGSNGLPFGGIGGAVGSGGDLGGGLGGPAGGIGGLGGLGGTGGGIGGGAGSGLGGGSGLTNP