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CmoCh17G012460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmembrane protein of ER body 1-like
Genome locationCmo_Chr17:9875874..9881065
RNA-Seq ExpressionCmoCh17G012460
SyntenyCmoCh17G012460
Gene Ontology termsGO:0030026 - cellular manganese ion homeostasis (biological process)
GO:0071421 - manganese ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005384 - manganese ion transmembrane transporter activity (molecular function)
InterPro domainsIPR008217 - Ccc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575996.1 Membrane protein of ER body 1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2972.38Show/hide
Query:  MNRKTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIML
        + RKTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG      +GF+    E +    FL +  +
Subjt:  MNRKTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIML

Query:  TVLQM
        T++ +
Subjt:  TVLQM

XP_022144855.1 membrane protein of ER body 2-like isoform X1 [Momordica charantia]5.1e-1357.97Show/hide
Query:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG
        K VALSL++LI GLFVM+Y+IS  W+N Q++G  E  +E  ++YE++FGDRKN+RLH T A+LSF+ FG
Subjt:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG

XP_022991758.1 membrane protein of ER body 1-like [Cucurbita maxima]6.4e-1661.9Show/hide
Query:  YRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVLQM
        + ISKHW +GQESGPDEQREEEVDRYEQVFGDRKN+RLHLTVAILSFLIFG      +GF+    E +    FL +  +T++ +
Subjt:  YRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVLQM

XP_023549430.1 membrane protein of ER body 1-like, partial [Cucurbita pepo subsp. pepo]1.5e-2568.63Show/hide
Query:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVL
        KTVALSLSNLIIGLFVMSYRISKHWINGQESG DEQREEEVD YEQVFGDR+NHRLHLTVAI+SFLI G      +GF+    E +    FL +  +T++
Subjt:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVL

Query:  QM
         +
Subjt:  QM

XP_038897300.1 membrane protein of ER body-like protein isoform X1 [Benincasa hispida]1.9e-1258.57Show/hide
Query:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEE-VDRYEQVFGDRKNHRLHLTVAILSFLIFG
        K +A+SL++LI G FVM+Y+IS+ WI   ESG DE  ++E  +RYE VFGDRKN+RLH  VA+LSF++FG
Subjt:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEE-VDRYEQVFGDRKNHRLHLTVAILSFLIFG

TrEMBL top hitse value%identityAlignment
A0A6J1CSU1 membrane protein of ER body 2-like isoform X12.5e-1357.97Show/hide
Query:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG
        K VALSL++LI GLFVM+Y+IS  W+N Q++G  E  +E  ++YE++FGDRKN+RLH T A+LSF+ FG
Subjt:  KTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG

A0A6J1GPB5 membrane protein of ER body 1-like isoform X14.1e-0847.56Show/hide
Query:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDME
        VAL+L+NLI GL V++  IS    N  +  P+E+ E +VD YE+  GDR+++ LH T+AILSFLIFG      +GFS  D +
Subjt:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDME

A0A6J1GPB8 membrane protein of ER body 1-like isoform X24.1e-0847.56Show/hide
Query:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDME
        VAL+L+NLI GL V++  IS    N  +  P+E+ E +VD YE+  GDR+++ LH T+AILSFLIFG      +GFS  D +
Subjt:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDME

A0A6J1JX70 membrane protein of ER body 1-like3.1e-1661.9Show/hide
Query:  YRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVLQM
        + ISKHW +GQESGPDEQREEEVDRYEQVFGDRKN+RLHLTVAILSFLIFG      +GF+    E +    FL +  +T++ +
Subjt:  YRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFSVSDMEIRLNFLFLNLIMLTVLQM

A0A6J1JXX6 membrane protein of ER body-like protein isoform X24.5e-0748.05Show/hide
Query:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFS
        VAL+L+NLI GL V++  IS    N  +  P+E+ E +VD YE+  GDR+++ LH T+A+LSFLIFG      +GFS
Subjt:  VALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG------HGFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27870.1 Vacuolar iron transporter (VIT) family protein4.6e-0438.89Show/hide
Query:  VALSLSNLIIGLFVMSY-----RISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG
        + L L+NL+ GL ++ +     R  +      E      REEE  RY+++ G R+N  LH TVAILSF+I G
Subjt:  VALSLSNLIIGLFVMSY-----RISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGAAAAACGGTAGCTCTTTCACTATCAAACTTGATTATTGGACTGTTTGTGATGAGCTATAGAATATCAAAACATTGGATAAACGGCCAGGAAAGTGGACCTGA
TGAACAAAGAGAGGAAGAAGTGGATAGATATGAGCAAGTCTTCGGAGATAGAAAAAACCATCGCCTCCATTTGACAGTGGCTATCCTATCATTCCTGATATTTGGGCATG
GATTTTCGGTATCAGACATGGAGATCCGTTTGAACTTTTTGTTCCTTAATCTTATAATGTTGACAGTTCTGCAAATGCAACCGCTCAAGAACAGGACAAGGACTCAGATT
TCAGAATTTATTCAGCCACCGTTTGCAGACAAGAAAGTTGGAGTTCCGCTGAGAATCCGTTCGAAATCTGCAACTTGGGTTCTTCAAAATCTCTTTAGACAGTGGATATT
TGGGCTGCTCTCTGCTCTCTGCTCTCTGCTCACTGCTCACTGCTCACTGTATCCGTCGTCAGCCGTCAGCGTACGGTCATTTAAAAGAAAAAAGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGAAAAACGGTAGCTCTTTCACTATCAAACTTGATTATTGGACTGTTTGTGATGAGCTATAGAATATCAAAACATTGGATAAACGGCCAGGAAAGTGGACCTGA
TGAACAAAGAGAGGAAGAAGTGGATAGATATGAGCAAGTCTTCGGAGATAGAAAAAACCATCGCCTCCATTTGACAGTGGCTATCCTATCATTCCTGATATTTGGGCATG
GATTTTCGGTATCAGACATGGAGATCCGTTTGAACTTTTTGTTCCTTAATCTTATAATGTTGACAGTTCTGCAAATGCAACCGCTCAAGAACAGGACAAGGACTCAGATT
TCAGAATTTATTCAGCCACCGTTTGCAGACAAGAAAGTTGGAGTTCCGCTGAGAATCCGTTCGAAATCTGCAACTTGGGTTCTTCAAAATCTCTTTAGACAGTGGATATT
TGGGCTGCTCTCTGCTCTCTGCTCTCTGCTCACTGCTCACTGCTCACTGTATCCGTCGTCAGCCGTCAGCGTACGGTCATTTAAAAGAAAAAAGTCGTAA
Protein sequenceShow/hide protein sequence
MNRKTVALSLSNLIIGLFVMSYRISKHWINGQESGPDEQREEEVDRYEQVFGDRKNHRLHLTVAILSFLIFGHGFSVSDMEIRLNFLFLNLIMLTVLQMQPLKNRTRTQI
SEFIQPPFADKKVGVPLRIRSKSATWVLQNLFRQWIFGLLSALCSLLTAHCSLYPSSAVSVRSFKRKKS