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CmoCh17G012810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G012810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionfimbrin-like protein 2
Genome locationCmo_Chr17:10069113..10069726
RNA-Seq ExpressionCmoCh17G012810
SyntenyCmoCh17G012810
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0051639 - actin filament network formation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005884 - actin filament (cellular component)
GO:0032432 - actin filament bundle (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR036872 - CH domain superfamily
IPR039959 - Fimbrin/Plastin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3001434.1 fimbrin-2 [Olea europaea subsp. europaea]1.6e-0868.63Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEILQRWLPIEIHKN
        DEEKKMNATYIISIARKLGCSIFLLPEDI E+N +Y  +    L +  H N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEILQRWLPIEIHKN
DAD24231.1 TPA_asm: hypothetical protein HUJ06_025694 [Nelumbo nucifera]9.3e-0997.06Show/hide
Query:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        IDEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
TQD78905.1 hypothetical protein C1H46_035535 [Malus baccata]2.7e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
XP_009334248.1 PREDICTED: fimbrin-2-like [Pyrus x bretschneideri]2.7e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
XP_010244055.1 PREDICTED: LOW QUALITY PROTEIN: fimbrin-2 [Nelumbo nucifera]9.3e-0997.06Show/hide
Query:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        IDEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
TrEMBL top hitse value%identityAlignment
A0A1U7YX64 LOW QUALITY PROTEIN: fimbrin-24.5e-0997.06Show/hide
Query:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        IDEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  IDEEKKMNATYIISIARKLGCSIFLLPEDITEIN
A0A498IUQ0 Uncharacterized protein1.3e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
A0A498JWT6 Uncharacterized protein1.3e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
A0A6J1GMG3 fimbrin-2-like1.3e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
B9SMN8 Fimbrin, putative1.3e-0896.97Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATYIISIARKLGCSIFLLPEDITE+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
SwissProt top hitse value%identityAlignment
O50064 Fimbrin-22.3e-1090.91Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATY+ISIARKLGCSIFLLPEDI E+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
Q7G188 Fimbrin-12.6e-0967.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        D+EK++NATYI+S+ARKLGCS+FLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
Q9FJ70 Fimbrin-32.6e-0967.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        D+EK++NATYI+S+ARKLGCS+FLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
Q9FKI0 Fimbrin-52.0e-0972.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        +E+KK+NATYIIS+ARKLGCSIFLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
Q9SJ84 Fimbrin-47.4e-0974.36Show/hide
Query:  EEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        EEK +NATYIIS+ARKLGCSIFLLPEDI E+N     IL
Subjt:  EEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
Arabidopsis top hitse value%identityAlignment
AT4G26700.1 fimbrin 11.8e-1067.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        D+EK++NATYI+S+ARKLGCS+FLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
AT4G26700.2 fimbrin 11.8e-1067.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        D+EK++NATYI+S+ARKLGCS+FLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
AT5G35700.1 fimbrin-like protein 21.4e-1072.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        +E+KK+NATYIIS+ARKLGCSIFLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein1.6e-1190.91Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
        DEEKKMNATY+ISIARKLGCSIFLLPEDI E+N
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEIN
AT5G55400.1 Actin binding Calponin homology (CH) domain-containing protein1.8e-1067.5Show/hide
Query:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL
        D+EK++NATYI+S+ARKLGCS+FLLPEDI E+N     IL
Subjt:  DEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAACATAGACGAGGAGAAAAAGATGAACGCAACCTACATCATTAGCATTGCAAGGAAGCTTGGATGTTCCATATTTTTGCTTCCTGAAGACATCACTGAGATAAA
CCACTCATATCCAGAAATTCTGCAAAGATGGCTTCCCATTGAAATCCATAAAAATAGGAAATTCGAAAAAATAGTTAAGAGAAAATTTATCAAGTTTTGGACTCGCTCCA
AAGCTCTTGTAGCTAAACACATGTGCCTTAGAGGGAACATGGTTATTGTGATGAGCATGATGTGCGAGCAAGGATGCTGGGGCGTTGATGTGGCGTGCACAAGGTGGGAG
AGGCTTGAGGGCCAGCAGGGAATGTTTTATGGTGTGGTCCAAAACAAACCTGGCTCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCAACATAGACGAGGAGAAAAAGATGAACGCAACCTACATCATTAGCATTGCAAGGAAGCTTGGATGTTCCATATTTTTGCTTCCTGAAGACATCACTGAGATAAA
CCACTCATATCCAGAAATTCTGCAAAGATGGCTTCCCATTGAAATCCATAAAAATAGGAAATTCGAAAAAATAGTTAAGAGAAAATTTATCAAGTTTTGGACTCGCTCCA
AAGCTCTTGTAGCTAAACACATGTGCCTTAGAGGGAACATGGTTATTGTGATGAGCATGATGTGCGAGCAAGGATGCTGGGGCGTTGATGTGGCGTGCACAAGGTGGGAG
AGGCTTGAGGGCCAGCAGGGAATGTTTTATGGTGTGGTCCAAAACAAACCTGGCTCGTAG
Protein sequenceShow/hide protein sequence
MTNIDEEKKMNATYIISIARKLGCSIFLLPEDITEINHSYPEILQRWLPIEIHKNRKFEKIVKRKFIKFWTRSKALVAKHMCLRGNMVIVMSMMCEQGCWGVDVACTRWE
RLEGQQGMFYGVVQNKPGS