CuGenDBv2

Gene ID	CmoCh17G012850
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein
Genome location	Cmo_Chr17:10090217..10090768
RNA-Seq Expression	CmoCh17G012850
Synteny	CmoCh17G012850
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004150335.2 uncharacterized protein LOC101219200 [Cucumis sativus]

2.4e-41

73.17

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDYY RRNYIPSFGNWEWNDHL FSHCFESSRIAG+PHDTDLYV GDLYENDVVTPAMIVVPR RRKR++QGKQ KK  + +     S  +      +P
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELL-AKSRK
         PKPVDEDLYKI P+LL AKS+K
Subjt:  KPKPVDEDLYKIPPELL-AKSRK

XP_022953419.1 uncharacterized protein LOC111455979 [Cucurbita moschata]

2.1e-66

100

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELLAKSRK
        KPKPVDEDLYKIPPELLAKSRK
Subjt:  KPKPVDEDLYKIPPELLAKSRK

XP_022991206.1 uncharacterized protein LOC111487931 [Cucurbita maxima]

9.8e-64

95.93

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR
        MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYEND++TPAMIVVPRHRRKREKQGK+GKKAN+ MNMKETESPPHELLQFPR
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR

Query:  PKPKPVDEDLYKIPPELLAKSRK
        PKPKPVDEDLYKIPPELLAKSRK
Subjt:  PKPKPVDEDLYKIPPELLAKSRK

XP_023548222.1 uncharacterized protein LOC111806925 [Cucurbita pepo subsp. pepo]

2.0e-64

98.37

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR
        MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKAN+ MNMKETESPPHELLQFPR
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR

Query:  PKPKPVDEDLYKIPPELLAKSRK
        PKPKPVDEDLYKIPPELLAKSRK
Subjt:  PKPKPVDEDLYKIPPELLAKSRK

XP_038899118.1 uncharacterized protein LOC120086508 [Benincasa hispida]

8.4e-47

76.61

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQF--P
        MEDYY RRNYIPSFGNWEWNDHL FSHCF+SSRIAGYPHDTDLYV GDLY+NDVVTPAMIVVPR RRKR++QGKQG+K N+  MKETESPP+ ++     
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQF--P

Query:  RPKPKPVDEDLYKIPPELLAKSRK
        +P PKPVDEDLYKI P+LLA   K
Subjt:  RPKPKPVDEDLYKIPPELLAKSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA54 Uncharacterized protein

1.1e-41

73.17

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDYY RRNYIPSFGNWEWNDHL FSHCFESSRIAG+PHDTDLYV GDLYENDVVTPAMIVVPR RRKR++QGKQ KK  + +     S  +      +P
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELL-AKSRK
         PKPVDEDLYKI P+LL AKS+K
Subjt:  KPKPVDEDLYKIPPELL-AKSRK

A0A6J1GPL2 uncharacterized protein LOC111455979

1.0e-66

100

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELLAKSRK
        KPKPVDEDLYKIPPELLAKSRK
Subjt:  KPKPVDEDLYKIPPELLAKSRK

A0A6J1H7P4 uncharacterized protein LOC111460910

1.7e-37

67.21

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDY  +RN+IP+FGNWEWNDHL F+ CFE+SRIAGYP   DLYV GDLY+NDVVTPAMIVVPR RRKR++ GKQ K+      K TESPP   L  P+P
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELLAKSRK
         PKPVDEDLYKI P   AK +K
Subjt:  KPKPVDEDLYKIPPELLAKSRK

A0A6J1JQ37 uncharacterized protein LOC111487931

4.8e-64

95.93

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR
        MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYEND++TPAMIVVPRHRRKREKQGK+GKKAN+ MNMKETESPPHELLQFPR
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANY-MNMKETESPPHELLQFPR

Query:  PKPKPVDEDLYKIPPELLAKSRK
        PKPKPVDEDLYKIPPELLAKSRK
Subjt:  PKPKPVDEDLYKIPPELLAKSRK

A0A6J1KPV8 uncharacterized protein LOC111497631

1.7e-37

67.21

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Query:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP
        MEDY  +RN+IP+FGNWEWNDHL F+ CFE+SRIAGYP   DLYV GDLY+NDVVTPAMIVVPR RRKR++ GKQ K+      K TESPP   L  P+P
Subjt:  MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRP

Query:  KPKPVDEDLYKIPPELLAKSRK
         PKPVDEDLYKI P   AK +K
Subjt:  KPKPVDEDLYKIPPELLAKSRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18310.2 unknown protein

5.5e-04

25.68

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Query:  EDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGY-------PHDTDLYVTGDLYENDVVTPAMIVVPRHRRKR------------EKQGKQGKKAN--
        + Y  +   IP FG WE  + +  +  FE+ R AG                T     +     A+ +   H R R            EK+G Q +  +  
Subjt:  EDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGY-------PHDTDLYVTGDLYENDVVTPAMIVVPRHRRKR------------EKQGKQGKKAN--

Query:  ------YMNMKETESPPHELLQFPRPKPKPVDEDLYKIPPELLAKSRK
              Y+++   +   +++    +P PKPVDEDLYKIPPE +  S +
Subjt:  ------YMNMKETESPPHELLQFPRPKPKPVDEDLYKIPPELLAKSRK

AT5G48500.1 unknown protein

4.5e-22

40.88

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Query:  YCRRNYIPSFGNWEWNDHLRFSHCFESS--------RIAGYPHDTDLYVTGDLYEN-DVVTPAMIVVPRHRRK------REKQGKQGKKANY-MNMKETE
        YCRR ++P+FG+W+WND + F+ CFE++          A YP D DLY+ GDLY+N  +V PA+I+VPR R K       +K+    ++ NY    +E  
Subjt:  YCRRNYIPSFGNWEWNDHLRFSHCFESS--------RIAGYPHDTDLYVTGDLYEN-DVVTPAMIVVPRHRRK------REKQGKQGKKANY-MNMKETE

Query:  SP---PHELLQFPRPKPKPVDEDLYKIPPELLAKSRK
        +P   P  +++     PKPVDEDLYK+ P+LL+   K
Subjt:  SP---PHELLQFPRPKPKPVDEDLYKIPPELLAKSRK

Sequences

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CDS sequence

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ATGGAGGACTACTACTGCCGGAGGAACTACATTCCGAGCTTCGGAAACTGGGAATGGAATGACCATCTCCGCTTCTCCCACTGCTTCGAATCATCCAGAATCGCCGGATA
TCCCCACGACACCGATTTGTACGTCACCGGCGATTTGTACGAAAACGACGTTGTCACCCCTGCAATGATCGTCGTCCCTCGCCACAGGAGGAAACGAGAGAAACAGGGGA
AGCAAGGAAAGAAGGCAAACTATATGAACATGAAGGAAACAGAGAGCCCTCCTCATGAACTGCTGCAATTCCCAAGGCCTAAGCCCAAGCCAGTCGACGAAGACTTATAC
AAAATCCCTCCCGAGCTCCTCGCCAAATCCAGAAAGGTCTTTTTCTGA

mRNA sequence

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Protein sequence

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MEDYYCRRNYIPSFGNWEWNDHLRFSHCFESSRIAGYPHDTDLYVTGDLYENDVVTPAMIVVPRHRRKREKQGKQGKKANYMNMKETESPPHELLQFPRPKPKPVDEDLY
KIPPELLAKSRKVFF

CmoCh17G012850 (gene) of Cucurbita moschata (Rifu) v1 genome