CuGenDBv2

Gene ID	CmoCh17G012940
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	mediator of RNA polymerase II transcription subunit 19a-like
Genome location	Cmo_Chr17:10173044..10175538
RNA-Seq Expression	CmoCh17G012940
Synteny	CmoCh17G012940
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0006777 - Mo-molybdopterin cofactor biosynthetic process (biological process) GO:0016592 - mediator complex (cellular component) GO:0019008 - molybdopterin synthase complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function) GO:0061798 - GTP 3',8'-cyclase activity (molecular function)
InterPro domains	IPR019403 - Mediator complex, subunit Med19, metazoa

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6576042.1 Ribonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-110

100

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIK
        KSKHKTSKIEEMGVIK
Subjt:  KSKHKTSKIEEMGVIK

XP_016900359.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis melo]

4.3e-107

95.89

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGV TIPGKS+SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHK SKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

XP_022953766.1 mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Cucurbita moschata]

2.0e-112

100

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHKTSKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

XP_023549111.1 mediator of RNA polymerase II transcription subunit 19a-like isoform X1 [Cucurbita pepo subsp. pepo]

4.5e-112

99.54

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKS+HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHKTSKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

XP_031744806.1 mediator of RNA polymerase II transcription subunit 19a [Cucumis sativus]

1.9e-107

96.35

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGV TIPGKS+SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHK SKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K716 Uncharacterized protein

5.2e-106

96.3

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGV TIPGKS+SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIK
        KSKHK SKIEEMGVIK
Subjt:  KSKHKTSKIEEMGVIK

A0A1S4DWJ4 mediator of RNA polymerase II transcription subunit 19a-like

2.1e-107

95.89

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLP AEKGV TIPGKS+SESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKK+KS HQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHK SKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

A0A6J1CP39 mediator of RNA polymerase II transcription subunit 19a-like isoform X2

4.7e-107

94.98

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHH+FFCKKSLPLSISDTHYLHNVVGD EIRKGEGMQLNQLIQNTSY RETNARIQPFDQDILI AFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGV TIPGKS+SESKDK+RKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKK++KSAH +SGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHKTSKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

A0A6J1GP53 mediator of RNA polymerase II transcription subunit 19a-like isoform X1

9.7e-113

100

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHKTSKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

A0A6J1JTJ7 mediator of RNA polymerase II transcription subunit 19a-like isoform X1

9.7e-113

100

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Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
        GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHK

Query:  KSKHKTSKIEEMGVIKVAG
        KSKHKTSKIEEMGVIKVAG
Subjt:  KSKHKTSKIEEMGVIKVAG

SwissProt top hits

e value

%identity

Alignment

Q6NQD9 Probable mediator of RNA polymerase II transcription subunit 19b

2.7e-67

67.13

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGD EIRKGEGMQL+QLI N S  SR+TNARIQPF  D L  AF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE

Query:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH
        T PV+LPPAEKG  T   KS+SESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK ++K   +         HH+KKRK++G +D +D+ RH
Subjt:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTSKIEEMGVI
        KKSKHK+SK++EMG +
Subjt:  KKSKHKTSKIEEMGVI

Q9FMP0 Mediator of RNA polymerase II transcription subunit 19a

7.2e-81

73.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        ME E  KFG GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGD EIRKGEGMQL+QLI++ S SRETN RIQPFD D L  +FQL + 
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDI
         PV+LPPAEKG  TIP KS+SESKD+DRKHKKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KK+K+ H DSG DHSKKHH+KKRKHDG++D+ND+
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKTSKIEEMGVIKVAG
         RHKK+KHK+SK++E+G I+VAG
Subjt:  HRHKKSKHKTSKIEEMGVIKVAG

Arabidopsis top hits

e value

%identity

Alignment

AT5G12230.1 MED19A

5.1e-82

73.09

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET
        ME E  KFG GPREL GA DLIS +KL+ HH+FFCKKSLP+S+SD+HYLHNVVGD EIRKGEGMQL+QLI++ S SRETN RIQPFD D L  +FQL + 
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRET

Query:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDI
         PV+LPPAEKG  TIP KS+SESKD+DRKHKKHKDRDK+KDREHKKHKH+HKDRSKDKDKDK    KK+K+ H DSG DHSKKHH+KKRKHDG++D+ND+
Subjt:  GPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDK----KKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDI

Query:  HRHKKSKHKTSKIEEMGVIKVAG
         RHKK+KHK+SK++E+G I+VAG
Subjt:  HRHKKSKHKTSKIEEMGVIKVAG

AT5G19480.1 unknown protein

1.9e-68

67.13

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGD EIRKGEGMQL+QLI N S  SR+TNARIQPF  D L  AF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE

Query:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH
        T PV+LPPAEKG  T   KS+SESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK ++K   +         HH+KKRK++G +D +D+ RH
Subjt:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTSKIEEMGVI
        KKSKHK+SK++EMG +
Subjt:  KKSKHKTSKIEEMGVI

AT5G19480.2 unknown protein

1.9e-68

67.13

Show/hide

Query:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE
        MESE  KFG GPREL GA+DLI+ YKLLPHH+FFCK+SLP S+SD HYLHN+VGD EIRKGEGMQL+QLI N S  SR+TNARIQPF  D L  AF+L +
Subjt:  MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSY-SRETNARIQPFDQDILIGAFQLRE

Query:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH
        T PV+LPPAEKG  T   KS+SESKDKDRKH+KHKD+ KEKDREHKKHKH+HKDR KDKDKDK ++K   +         HH+KKRK++G +D +D+ RH
Subjt:  TGPVDLPPAEKGVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRH

Query:  KKSKHKTSKIEEMGVI
        KKSKHK+SK++EMG +
Subjt:  KKSKHKTSKIEEMGVI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATCTGAAGATAAGAAGTTTGGCCGAGGGCCTAGGGAACTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCACCATGATTTTTTCTGCAAGAA
GTCGCTTCCATTGTCAATTTCGGATACACATTATCTTCATAACGTGGTTGGAGACATAGAAATTAGAAAAGGGGAAGGGATGCAGTTGAATCAACTCATACAGAATACTT
CTTATTCTAGAGAGACCAATGCCCGCATACAGCCATTTGACCAAGATATTCTCATCGGAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGATCTGCCTCCTGCCGAGAAG
GGTGTTGCTACTATTCCAGGGAAGTCAAGAAGTGAGTCCAAAGATAAAGACAGAAAGCATAAGAAGCACAAAGATAGGGATAAGGAGAAGGATAGAGAGCATAAGAAGCA
TAAGCATCGACATAAAGACCGAAGTAAGGATAAAGACAAGGACAAGAAGAAAGAGAAAAGTGCCCATCAAGATTCTGGCGCTGATCATTCGAAGAAGCATCATGAAAAGA
AAAGGAAGCATGATGGAGAAGATGACATTAATGACATTCATAGGCACAAAAAAAGTAAGCATAAGACCTCAAAAATCGAAGAAATGGGAGTGATAAAGGTAGCGGGGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MESEDKKFGRGPRELTGAVDLISHYKLLPHHDFFCKKSLPLSISDTHYLHNVVGDIEIRKGEGMQLNQLIQNTSYSRETNARIQPFDQDILIGAFQLRETGPVDLPPAEK
GVATIPGKSRSESKDKDRKHKKHKDRDKEKDREHKKHKHRHKDRSKDKDKDKKKEKSAHQDSGADHSKKHHEKKRKHDGEDDINDIHRHKKSKHKTSKIEEMGVIKVAG

CmoCh17G012940 (gene) of Cucurbita moschata (Rifu) v1 genome