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CmoCh17G013090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G013090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtodermal factor 1 like
Genome locationCmo_Chr17:10248556..10249238
RNA-Seq ExpressionCmoCh17G013090
SyntenyCmoCh17G013090
Gene Ontology termsNA
InterPro domainsIPR039923 - Protodermal factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576062.1 hypothetical protein SDJN03_26701, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6994.19Show/hide
Query:  METFRLLSYLLLLYF-ATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFG
        MET RLLS+L LLYF A AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVA+ADEEEEEEAFG
Subjt:  METFRLLSYLLLLYF-ATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFG

Query:  RVVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        RVVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANESCN
Subjt:  RVVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

KAG7014579.1 hypothetical protein SDJN02_24757, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-6894.12Show/hide
Query:  METFRLLSYLLLLYF-ATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFG
        MET RLLS+L LLYF A AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRM PESATVAKIFGSRAHERYG+EMTLLAAATVA+ADEEEEEEAFG
Subjt:  METFRLLSYLLLLYF-ATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFG

Query:  RVVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANES
        RVVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQSQRFAFANES
Subjt:  RVVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANES

XP_022953859.1 uncharacterized protein LOC111456270 [Cucurbita moschata]2.8e-76100Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

XP_022991546.1 uncharacterized protein LOC111488125 [Cucurbita maxima]2.1e-7197.4Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        MET RLLS+LLLLYFA AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVA+ADEEEEEEAFGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

XP_023548905.1 uncharacterized protein LOC111807417 [Cucurbita pepo subsp. pepo]3.4e-7497.4Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        METFRLLSYLLLLYFATAAAGEAALSR PGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVA+ADEEEEEEAFGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSYARRDFPY+AWEVKTLLIKALVSKEAAALQS RFAFANESCN
Subjt:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

TrEMBL top hitse value%identityAlignment
A0A0A0K735 Uncharacterized protein1.2e-5378.71Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        M++ R L+ LLLL FA AA  E A +RRPGFLFSRT GRCT +FWSSR EAWPRMAPESATVAKIFGSRAHERYGSEMTL+ AA  A    +EEEE FGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRD-FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSY RR  FPY+AWEVKTL IKALVSKEAA LQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRD-FPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

A0A1S3BQF6 uncharacterized protein LOC1034925953.3e-5177.92Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        M++   L+ LLLL F  AAA E A +R PGFLFSRT GRCT +FWSSR EAWPRMAPESATVAKIFGSRA ERYGSEMTL+ AA  A      EEE FGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYA-RRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESC
        VVKEATAALLNSYA RRDFPY+AWEVKTLLIKALVSKEAA LQSQRFAFANESC
Subjt:  VVKEATAALLNSYA-RRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESC

A0A5A7UZL8 Uncharacterized protein3.3e-5177.92Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        M++   L+ LLLL F  AAA E A +R PGFLFSRT GRCT +FWSSR EAWPRMAPESATVAKIFGSRA ERYGSEMTL+ AA  A      EEE FGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYA-RRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESC
        VVKEATAALLNSYA RRDFPY+AWEVKTLLIKALVSKEAA LQSQRFAFANESC
Subjt:  VVKEATAALLNSYA-RRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESC

A0A6J1GR22 uncharacterized protein LOC1114562701.3e-76100Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

A0A6J1JR18 uncharacterized protein LOC1114881251.0e-7197.4Show/hide
Query:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR
        MET RLLS+LLLLYFA AAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVA+ADEEEEEEAFGR
Subjt:  METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGR

Query:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
        VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
Subjt:  VVKEATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein5.2e-0433.04Show/hide
Query:  CTPEFW--SSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYARRDFPYAAWEVKTLLIKALV--S
        C+ + W     R  W  + P++  VA  FG  A   YG++MT+  A        +   EA+  +++EAT ALLNSY    FPY +  V T    AL+  S
Subjt:  CTPEFW--SSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALLNSYARRDFPYAAWEVKTLLIKALV--S

Query:  KEAAALQSQRFAFAN
        +    + + RF  AN
Subjt:  KEAAALQSQRFAFAN

AT2G20515.1 unknown protein2.2e-3450.67Show/hide
Query:  LLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSR-AHERYGSEMTLLAAATVALADEEEEEEAFGRVVKE
        L+++ LL +F    AG+++ + RPGF+++R RGRCTP++WSS+REAWPRM PE +TV KIFG   A ER+ S++TL+ +     A  +EE  A+G ++K+
Subjt:  LLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSR-AHERYGSEMTLLAAATVALADEEEEEEAFGRVVKE

Query:  ATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN
          AAL+NSYAR+ F YA WEVKT+LI+A+VS+ AA  Q++ FA AN +C+
Subjt:  ATAALLNSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAG
AGGAAGATGCACTCCAGAGTTTTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGT
ACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCATTGGCAGATGAGGAAGAGGAAGAGGAGGCGTTTGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTG
AATTCGTATGCAAGAAGGGATTTCCCATACGCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGC
CTTCGCTAACGAGTCCTGTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAG
AGGAAGATGCACTCCAGAGTTTTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGT
ACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCATTGGCAGATGAGGAAGAGGAAGAGGAGGCGTTTGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTG
AATTCGTATGCAAGAAGGGATTTCCCATACGCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGC
CTTCGCTAACGAGTCCTGTAATTAG
Protein sequenceShow/hide protein sequence
METFRLLSYLLLLYFATAAAGEAALSRRPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVALADEEEEEEAFGRVVKEATAALL
NSYARRDFPYAAWEVKTLLIKALVSKEAAALQSQRFAFANESCN