; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G013140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G013140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCLIP-associated protein-like isoform X1
Genome locationCmo_Chr17:10279869..10281403
RNA-Seq ExpressionCmoCh17G013140
SyntenyCmoCh17G013140
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576068.1 CLIP-associated protein, partial [Cucurbita argyrosperma subsp. sororia]8.4e-9184.38Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVS+DAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

XP_022953442.1 CLIP-associated protein-like isoform X1 [Cucurbita moschata]3.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

XP_022953443.1 CLIP-associated protein-like isoform X2 [Cucurbita moschata]3.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

XP_023547473.1 CLIP-associated protein-like isoform X1 [Cucurbita pepo subsp. pepo]3.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

XP_023547474.1 CLIP-associated protein-like isoform X2 [Cucurbita pepo subsp. pepo]3.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

TrEMBL top hitse value%identityAlignment
A0A6J1GN88 CLIP-associated protein-like isoform X11.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

A0A6J1GNC3 CLIP-associated protein-like isoform X21.8e-9184.82Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAIDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

A0A6J1H7G3 CLIP-associated protein-like isoform X26.1e-8780.8Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEV DNSDSSVRE+AL+LITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVS+DAE+CLT+VLSQYDPFRCLSVI PLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLE LNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQLRLVTIYANRISQARTGTAI+A
Subjt:  TQLRLVTIYANRISQARTGTAIDA

A0A6J1JT99 CLIP-associated protein-like isoform X22.0e-9083.86Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIV+EKLLHVTKDIIPKVS+DAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAID
        TQLRLVTIYANRISQARTGTAID
Subjt:  TQLRLVTIYANRISQARTGTAID

A0A6J1JV62 CLIP-associated protein-like isoform X12.0e-9083.86Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIV+EKLLHVTKDIIPKVS+DAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRK                                  TVVFCLVDIYIMLGKQFLPHLEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAID
        TQLRLVTIYANRISQARTGTAID
Subjt:  TQLRLVTIYANRISQARTGTAID

SwissProt top hitse value%identityAlignment
Q7Z460 CLIP-associating protein 12.9e-1726.24Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        +F  IL ++LE   + D S+R LAL ++ E+++NQ    ++  E+ I K L   KD   +V   AE   + + S   P +C+ V+ P++ T D    +  
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        I   TK+V R+++E L+  L   +P L + + +  + VRK                                    VFCLV IY ++G+   PHL  L  
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTA
        ++++L+ +Y  R     + ++
Subjt:  TQLRLVTIYANRISQARTGTA

Q80TV8 CLIP-associating protein 12.9e-1726.24Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        +F  IL ++LE   + D S+R LAL ++ E+++NQ    ++  E+ I K L   KD   +V   AE   + + S   P +C+ V+ P++ T D    +  
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        I   TK+V R+++E L+  L   +P L + + +  + VRK                                    VFCLV IY ++G+   PHL  L  
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTA
        ++++L+ +Y  R     + ++
Subjt:  TQLRLVTIYANRISQARTGTA

Q8BRT1 CLIP-associating protein 23.8e-1725.79Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        +F  IL ++LE   + + ++R LAL ++ E++++Q    ++  E+ + K L   KD   +V   AE   +V+ +   P +C+ V+ P++ T D    +  
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        I   TK++ R+S+E L   LP  +P L + + +  + VRK                                    VFCLV ++ ++G +  PHL  L  
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTA
        ++++L+ +Y   I +A+TG+A
Subjt:  TQLRLVTIYANRISQARTGTA

Q8RWY6 CLIP-associated protein1.4e-7770.54Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTV+LEV D+ D S++ELALSLI+EM+K+Q+D+MEDSVEIVIEKLLHV+KD +PKVS++AE CLT VLSQYDPFRCLSVI PLLVTEDEKTLV C
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELM QL +FLPA+FEAFG QSADVRK                                  TVVFCLVDIYIMLGK FLP+LEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQ+RLVTIYANRISQAR G  IDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA

Q99JD4 CLIP-associating protein 23.8e-1725.79Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        +F  IL ++LE   + + ++R LAL ++ E++++Q    ++  E+ + K L   KD   +V   AE   +V+ +   P +C+ V+ P++ T D    +  
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        I   TK++ R+S+E L   LP  +P L + + +  + VRK                                    VFCLV ++ ++G +  PHL  L  
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTA
        ++++L+ +Y   I +A+TG+A
Subjt:  TQLRLVTIYANRISQARTGTA

Arabidopsis top hitse value%identityAlignment
AT2G20190.1 CLIP-associated protein1.0e-7870.54Show/hide
Query:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC
        YFNQILTV+LEV D+ D S++ELALSLI+EM+K+Q+D+MEDSVEIVIEKLLHV+KD +PKVS++AE CLT VLSQYDPFRCLSVI PLLVTEDEKTLV C
Subjt:  YFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVITPLLVTEDEKTLVTC

Query:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS
        INCLTKLVGRLSQEELM QL +FLPA+FEAFG QSADVRK                                  TVVFCLVDIYIMLGK FLP+LEGLNS
Subjt:  INCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLEGLNS

Query:  TQLRLVTIYANRISQARTGTAIDA
        TQ+RLVTIYANRISQAR G  IDA
Subjt:  TQLRLVTIYANRISQARTGTAIDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACGACCCAAAACTTGGTTGATTGTTTTGCTTTGCTTCCTTTTGCTGTGGGTCGATTTTCGTCTCATATACTTCAATCAAATTTTGACAGTGATACTGGAAGTGTT
TGATAATTCTGATTCCTCAGTACGTGAGCTTGCTCTTTCATTGATAACTGAAATGATTAAGAATCAGAGGGACTCTATGGAAGATTCTGTTGAGATCGTTATTGAGAAAC
TGCTTCATGTTACCAAGGACATTATTCCCAAAGTATCAAGTGATGCAGAGCATTGCCTGACTGTTGTGTTATCTCAGTATGATCCATTCAGATGCTTAAGTGTTATTACT
CCTCTGTTGGTTACCGAGGATGAGAAAACTCTTGTTACATGCATCAATTGCTTGACAAAGCTTGTCGGTCGGCTGTCACAAGAAGAGTTGATGACACAGTTGCCCACTTT
TTTGCCTGCTCTCTTTGAAGCATTTGGACACCAGAGTGCTGATGTGAGAAAGGTAATGGCCGACTGTTTTTCGAATGATACTCCCCTTGCCCTGCCTGCCTATAAAGCAT
CCACCCATATCTCACGTAGCCTATTCACTGCCAATTTGCTGCAGACTGTTGTCTTCTGTCTTGTTGACATCTACATAATGCTGGGGAAACAATTTTTGCCACACTTGGAG
GGACTCAACAGCACTCAACTACGTTTGGTTACAATTTACGCCAATCGAATTTCGCAAGCTAGGACGGGAACCGCCATTGACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACGACCCAAAACTTGGTTGATTGTTTTGCTTTGCTTCCTTTTGCTGTGGGTCGATTTTCGTCTCATATACTTCAATCAAATTTTGACAGTGATACTGGAAGTGTT
TGATAATTCTGATTCCTCAGTACGTGAGCTTGCTCTTTCATTGATAACTGAAATGATTAAGAATCAGAGGGACTCTATGGAAGATTCTGTTGAGATCGTTATTGAGAAAC
TGCTTCATGTTACCAAGGACATTATTCCCAAAGTATCAAGTGATGCAGAGCATTGCCTGACTGTTGTGTTATCTCAGTATGATCCATTCAGATGCTTAAGTGTTATTACT
CCTCTGTTGGTTACCGAGGATGAGAAAACTCTTGTTACATGCATCAATTGCTTGACAAAGCTTGTCGGTCGGCTGTCACAAGAAGAGTTGATGACACAGTTGCCCACTTT
TTTGCCTGCTCTCTTTGAAGCATTTGGACACCAGAGTGCTGATGTGAGAAAGGTAATGGCCGACTGTTTTTCGAATGATACTCCCCTTGCCCTGCCTGCCTATAAAGCAT
CCACCCATATCTCACGTAGCCTATTCACTGCCAATTTGCTGCAGACTGTTGTCTTCTGTCTTGTTGACATCTACATAATGCTGGGGAAACAATTTTTGCCACACTTGGAG
GGACTCAACAGCACTCAACTACGTTTGGTTACAATTTACGCCAATCGAATTTCGCAAGCTAGGACGGGAACCGCCATTGACGCTTAG
Protein sequenceShow/hide protein sequence
MQRPKTWLIVLLCFLLLWVDFRLIYFNQILTVILEVFDNSDSSVRELALSLITEMIKNQRDSMEDSVEIVIEKLLHVTKDIIPKVSSDAEHCLTVVLSQYDPFRCLSVIT
PLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQLPTFLPALFEAFGHQSADVRKVMADCFSNDTPLALPAYKASTHISRSLFTANLLQTVVFCLVDIYIMLGKQFLPHLE
GLNSTQLRLVTIYANRISQARTGTAIDA