; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh17G013260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G013260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTPR_REGION domain-containing protein
Genome locationCmo_Chr17:10407578..10408957
RNA-Seq ExpressionCmoCh17G013260
SyntenyCmoCh17G013260
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016759 - cellulose synthase activity (molecular function)
InterPro domainsIPR003107 - HAT (Half-A-TPR) repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039891.1 TPR_11 domain-containing protein [Cucumis melo var. makuwa]1.2e-12271.27Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RSIL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TPEVRAMEQAW+R+ + GDG+GF GDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ--------WKGDVRGAEEYYSRAILMDCSQDGE
        +KEM+LAR  G GGG G GGGGGR  S  GGGGGGE++GMEEYYKKMVVENPGNALVL NYAEFLY+         KGD+  AEEYYSRAILMD SQDGE
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ--------WKGDVRGAEEYYSRAILMDCSQDGE

Query:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        ILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

KAG6576080.1 hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sororia]3.3e-13398.79Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
        MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL

Query:  SHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
        SHRPNRS+LETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTP VRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
Subjt:  SHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG

Query:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ
        GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVL NYAEFLYQ
Subjt:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ

KAG7014598.1 hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-18897.14Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
        MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHS FAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKL

Query:  SHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
        SHRPNRS+LETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTP VRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG
Subjt:  SHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGG

Query:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ-----WKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY
        GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVL NYAEFLYQ      KGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY
Subjt:  GGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ-----WKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY

Query:  FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT
        FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT
Subjt:  FQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLHGSCNSLT

XP_008459965.1 PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]2.9e-12673.16Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RS+L+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TPEVRAMEQAW+R+ + GDGIGFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL
        +KEM+LAR  G GGG G GGGGGR  +  GGGGGGE++GMEEYYKKMVVENPGNALVL NYAEFLY+ KGD+R AEEYYSRAILMD SQDGEILSKYAKL
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL

Query:  VWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        VWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  VWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

XP_038874350.1 uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]7.0e-12876.35Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSF--------SDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSF
        MLL+SSSTPLL SLLPPD   HHHD V KHS SPS  PFAF CNNK LSF        S    A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSF
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSF--------SDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSF

Query:  NFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMH
        NFKPSN  SH   RS+L+TIPSFSFY SRART EEDD+DDDQH DPEEDE  L +FG+ NRM  DAAIVTPEV+AME AWT     DGIGFVGD QKEM+
Subjt:  NFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMH

Query:  LARGPG-GGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHR
        L    G GG G GGGGGRR S  GGGGGGEQHGMEEYYKKMV+ENPGNALVL NYAEFLYQ +GD+RGAEEYYSRAILMD +QDGEILSKYAKLVWELH 
Subjt:  LARGPG-GGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHR

Query:  DQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLH
        DQQKA +YFQRALQASPHDS+VQAAYANFLWETEE ED  SLGK MAT  +
Subjt:  DQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMATDLH

TrEMBL top hitse value%identityAlignment
A0A0A0KA70 TPR_REGION domain-containing protein1.3e-10671.56Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLS-------------FSDHHR-AAPTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPD  HHHHD  GKHSP    S F F CNNKPLS             FSDHHR AAP+GFRRT+SEGNL T+SHASDVIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLS-------------FSDHHR-AAPTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL
        FSFDS NFK S K  H   RSIL+TIPSFSFYGSRARTEEE +E++D+  D +E+E  L NF +    DAAIVTPEVRAMEQAW+R+ + GDG+GFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRR--SGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL
        +KEM+LAR  G GGG G GGGGGR +   GGGGGGE++GMEEYYKKMVVENP NALVL NYAEFLYQ KGD+  AEEYYSRAILMD S DGE LSKYAKL
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRR--SGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL

Query:  VWELHRDQQKASSYFQRALQASPHDSH
        VWELH DQQKA SYFQRALQASP D +
Subjt:  VWELHRDQQKASSYFQRALQASPHDSH

A0A1S3CCM7 uncharacterized protein LOC1034989231.4e-12673.16Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RS+L+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TPEVRAMEQAW+R+ + GDGIGFVGDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL
        +KEM+LAR  G GGG G GGGGGR  +  GGGGGGE++GMEEYYKKMVVENPGNALVL NYAEFLY+ KGD+R AEEYYSRAILMD SQDGEILSKYAKL
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKL

Query:  VWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        VWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  VWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

A0A5A7TE10 TPR_11 domain-containing protein5.6e-12371.27Show/hide
Query:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP
        MLL+SSSTPLL SLLPPDH HHH+D VGKHSP    S F F CNNKPL             SFSDHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDP
Subjt:  MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPL-------------SFSDHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDP

Query:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL
        FS DS NFK SNK S    RSIL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG+    +AA++TPEVRAMEQAW+R+ + GDG+GF GDL
Subjt:  FSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNS-GDGIGFVGDL

Query:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ--------WKGDVRGAEEYYSRAILMDCSQDGE
        +KEM+LAR  G GGG G GGGGGR  S  GGGGGGE++GMEEYYKKMVVENPGNALVL NYAEFLY+         KGD+  AEEYYSRAILMD SQDGE
Subjt:  QKEMHLAR--GPGGGGGGGGGGGRRRS--GGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQ--------WKGDVRGAEEYYSRAILMDCSQDGE

Query:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT
        ILSKYAKLVWELH DQQKA SYFQRALQASPHDSHVQAAYANFLWETEE ED +S+GKE AT
Subjt:  ILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKEMAT

A0A6J1GSL1 uncharacterized protein LOC1114565934.8e-66100Show/hide
Query:  MEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWET
        MEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWET
Subjt:  MEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWET

Query:  EEYEDGRSLGKEMATDLHGSCNSLT
        EEYEDGRSLGKEMATDLHGSCNSLT
Subjt:  EEYEDGRSLGKEMATDLHGSCNSLT

B9GRD4 TPR_REGION domain-containing protein4.8e-6648.39Show/hide
Query:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHSPFAF-----RCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA
        MLLRSSSTP+L SLL            +HHHD     KHSP         P H    F      CN+ P+  S S+    +  GFRR  SEGNL      
Subjt:  MLLRSSSTPLLRSLLPP-------DHLHHHHD--AVGKHSP--------SPSHSPFAF-----RCNNKPL--SFSDHHRAAPTGFRRTHSEGNLITLSHA

Query:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPEVRAME
          ++D   +      +N   + K+S R    +LETIPSFS+   R R E+ED+ED+DQ    +E+E       VA EN  FG+ N+M+  ++T EVR M+
Subjt:  SDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSILETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN--FGVHNRMDAAIVTPEVRAME

Query:  QAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDV
        + W+       + F G    + +EMHLARGPG      G GGGGG GGR   G G     GGG+ HG EEYYKKMV ENPGN L LRNYA+FLYQ K D+
Subjt:  QAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GGGGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDV

Query:  RGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
        +GAEEYYSRAIL D  +DGEILS+Y KLVWELH+DQ +ASSYF+R +QASP D HV AAYA+FLWETE+ +D
Subjt:  RGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-2350.45Show/hide
Query:  GGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYA
        G +     +YYK M+ E P + L+L+NYA+FL ++KGD+ GAEEYY +  +++ S DG  L+ Y +LV +LH+D+ KA SYF+RA+QASP DS V AAYA
Subjt:  GGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYA

Query:  NFLWETEEYED
        +FLWE    +D
Subjt:  NFLWETEEYED

AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.2e-2646.9Show/hide
Query:  GGGGGGGGGGGRRRSGGG--------GGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHR
        GGGGG GG GG   +GGG        GG  +   + YY++M+  NPGN+L+  NYA+FL + KGD++ AEEY  RAIL + + DG +LS YA L+   H+
Subjt:  GGGGGGGGGGGRRRSGGG--------GGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHR

Query:  DQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKE
        D+Q+A SY+++A++ SP D +VQA+YA FLW+ +E E+  +LG+E
Subjt:  DQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLGKE

AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-2544.81Show/hide
Query:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQD
        R   G G    G L  E     G G GGG G  GG    GGGG  ++  + +YY++M+  NP N+L+L NY +FLY+ + D  GAEEYY RAIL +   D
Subjt:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQD

Query:  GEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
        GE LS Y +L+WE  RD+++A  YF +A+ ASP+D  V  +YA F+WE E+ +D
Subjt:  GEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED

AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.1e-2549.61Show/hide
Query:  GGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY
        GG  GG GG G   +GGGGGG    ++ YY++M+   PG+ L+L NYA FL + KGD R AEEY  RA+L +  +DGE+LS Y  L+W+ H D  +A SY
Subjt:  GGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSY

Query:  FQRALQASPHDSHVQAAYANFLWETEE
        + +A+Q+SP D +V A+YA FLW+ EE
Subjt:  FQRALQASPHDSHVQAAYANFLWETEE

AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.2e-2645.86Show/hide
Query:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDC
        R +S DGI +  D   E+      GGGGG   GGG+ RSGG   GG G     + +Y+KM+  NPGN + L NYA+FL + + D   AEEY  RAIL+  
Subjt:  RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDC

Query:  SQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED
          DG +L+ YA+LVW++H+D  +A +YF +A+ A+P D +VQA+YA FLW+ EE E+
Subjt:  SQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTC
CCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTT
CTCATGCTTCAGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGCTCCATTCTCGAG
ACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAGGATGAAGTTGCCTTGGAGAA
TTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGAGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTG
ATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGCGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGC
ATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGGAACTATGCGGAGTTCTTGTACCAGTGGAAAGGAGACGTGCGAGGAGCGGA
AGAGTATTACAGCAGAGCCATTTTAATGGATTGTTCCCAAGATGGAGAGATTTTGTCAAAATATGCGAAGTTAGTGTGGGAGTTGCATCGTGACCAACAAAAAGCTTCAT
CCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCTAATTTCCTGTGGGAAACAGAAGAATATGAGGATGGACGCAGCTTAGGA
AAAGAAATGGCAACAGACTTACACGGCAGCTGCAACAGCTTGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTC
CCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTT
CTCATGCTTCAGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGCTCCATTCTCGAG
ACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAGGATGAAGTTGCCTTGGAGAA
TTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGAGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTG
ATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGCGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGC
ATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGGAACTATGCGGAGTTCTTGTACCAGTGGAAAGGAGACGTGCGAGGAGCGGA
AGAGTATTACAGCAGAGCCATTTTAATGGATTGTTCCCAAGATGGAGAGATTTTGTCAAAATATGCGAAGTTAGTGTGGGAGTTGCATCGTGACCAACAAAAAGCTTCAT
CCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCTAATTTCCTGTGGGAAACAGAAGAATATGAGGATGGACGCAGCTTAGGA
AAAGAAATGGCAACAGACTTACACGGCAGCTGCAACAGCTTGACATGA
Protein sequenceShow/hide protein sequence
MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSILE
TIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPEVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHG
MEEYYKKMVVENPGNALVLRNYAEFLYQWKGDVRGAEEYYSRAILMDCSQDGEILSKYAKLVWELHRDQQKASSYFQRALQASPHDSHVQAAYANFLWETEEYEDGRSLG
KEMATDLHGSCNSLT