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CmoCh17G013350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh17G013350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionEmbryo sac development arrest protein
Genome locationCmo_Chr17:10456859..10457269
RNA-Seq ExpressionCmoCh17G013350
SyntenyCmoCh17G013350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039884.1 uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa]1.8e-3962.2Show/hide
Query:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----
        NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A     
Subjt:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----

Query:  ----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
                   +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Subjt:  ----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

KAG6576089.1 Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.7e-6496.83Show/hide
Query:  MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELH
        MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELH
Subjt:  MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELH

Query:  PKNYQSYVEVANLLKHGGAHFQGIVN
        PKNYQSYVEVANLLKHGGAHFQ  ++
Subjt:  PKNYQSYVEVANLLKHGGAHFQGIVN

KAG7014604.1 hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-6899.23Show/hide
Query:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
        MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS
Subjt:  MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQS

Query:  YVEVANLLKHGGAHFQGIVNPTQLARLLNL
        YVEVANLLKHGGAHFQGIVNPTQLAR LNL
Subjt:  YVEVANLLKHGGAHFQGIVNPTQLARLLNL

XP_011656778.1 uncharacterized protein LOC105435768 [Cucumis sativus]2.2e-4063.64Show/hide
Query:  NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD--------------
        NTTKTMRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S  LLAGYLAHEF TKGTLFGQ WD+PD              
Subjt:  NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD--------------

Query:  ---VSMAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
            S ++SPP   +  EKRQAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Subjt:  ---VSMAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

XP_038906548.1 uncharacterized protein LOC120092519 [Benincasa hispida]8.0e-5177.24Show/hide
Query:  MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-DDEAHQLSFTAKVSKPTPP----QSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSM----AASPPDL
        MNTTKTMRLPPRRLMTS  P  RP KRKER+G  DDEAHQLS TAKV KP PP     SNHLLAGYLAHEF TKGTLFGQAWD PD +M    A+SP + 
Subjt:  MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-DDEAHQLSFTAKVSKPTPP----QSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSM----AASPPDL

Query:  NEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
        +EK Q ELHPKNYQSYVEVANLLKH G HFQGIVNPTQLARLLNL
Subjt:  NEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

TrEMBL top hitse value%identityAlignment
A0A0A0KDC0 Uncharacterized protein1.1e-4063.64Show/hide
Query:  NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD--------------
        NTTKTMRLPPRRLMTS  P+   NKRKER+G      DDEAHQL  TAKV KPTP P S  LLAGYLAHEF TKGTLFGQ WD+PD              
Subjt:  NTTKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTP-PQSNHLLAGYLAHEFFTKGTLFGQAWDHPD--------------

Query:  ---VSMAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
            S ++SPP   +  EKRQAE    HP KNYQSYVEVANLLKH G H +GIVNPTQLAR LNL
Subjt:  ---VSMAASPP---DLNEKRQAEL---HP-KNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

A0A0D2N9W4 Uncharacterized protein9.6e-2654.36Show/hide
Query:  TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAH-QLSFTAKVSKPTPPQ---SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ
        TKTMRLPPRR+     P S P NKRKER GFD +    L  ++K   PT P    SNHLLAGYLAHEF T GTLFGQ WD   P  S A S   + EK +
Subjt:  TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAH-QLSFTAKVSKPTPPQ---SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEKRQ

Query:  ---------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
                 AE  PK +Q YVEVA+LLK  GAH  GIVNPTQL+R L +
Subjt:  ---------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

A0A1S3CBD7 uncharacterized protein LOC1034989151.2e-3961.82Show/hide
Query:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----
        NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A     
Subjt:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----

Query:  -----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
                    +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Subjt:  -----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

A0A5A7T8V2 Uncharacterized protein8.9e-4062.2Show/hide
Query:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----
        NTTKTMRLPPRRLMTS  P  ++  NKRKER+G DD+        AHQLSFTAKV  PTPP S  LLAGYLAHEF TKGTLFGQ WD +PD + A     
Subjt:  NTTKTMRLPPRRLMTSDGP--SSRPNKRKERKGFDDE--------AHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD-HPDVSMA-----

Query:  ----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
                   +  +  EKRQA+    H KNYQSYVEVANLLKH G+H QGIVNPTQLARLLNL
Subjt:  ----------ASPPDLNEKRQAEL---HPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

A0A5B6UNG4 Embryo sac development arrest protein7.3e-2654.3Show/hide
Query:  TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAHQLSFTAKVSKPTPPQ------SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEK
        TKTMRLPPRR+     P S P NKRKER GFD     L+     SKPT P       SNHLLAGYLAHEF T GTLFGQ WD   P  S A S   + EK
Subjt:  TKTMRLPPRRLMTSDGPSSRP-NKRKERKGFDDEAHQLSFTAKVSKPTPPQ------SNHLLAGYLAHEFFTKGTLFGQAWD--HPDVSMAASPPDLNEK

Query:  RQ---------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
         +         AE  PK +Q YVEVA+LLK  GAH  GIVNPTQL+R L +
Subjt:  RQ---------AELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04000.1 unknown protein1.1e-1839.87Show/hide
Query:  TKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTPPQSNH------------------LLAGYLAHEFFTKGTLFGQAWDHP
        TKTMRLPPRR++T+D       KRKER  F     D+      F +   K  PP  N                   +LAGYL+HE+ T+GTLFG+ W+  
Subjt:  TKTMRLPPRRLMTSDGPSSRPNKRKERKGF-----DDEAHQLSFTAKVSKPTPPQSNH------------------LLAGYLAHEFFTKGTLFGQAWDHP

Query:  DVSMAAS--PPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
             +S   P    +   E  PK  + Y EVANLL+  GA   GIVNP QLAR L L
Subjt:  DVSMAAS--PPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

AT3G23440.1 embryo sac development arrest 61.5e-1040.7Show/hide
Query:  NHLLAGYLAHEFFTKGTLFGQ----AWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
        N LLAGY+AHE+ T GT+ G+     W      ++ SP    E ++A       QSY EVA++ K  G H  G+VNPTQLA+ + +
Subjt:  NHLLAGYLAHEFFTKGTLFGQ----AWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL

AT5G44060.1 unknown protein3.6e-1739.33Show/hide
Query:  TKTMRLPPRRLMTSD-----------GPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD------HPDVSMAA
        TKTMRLPPRR+ +              P   P K   +K       + + TA V+   P  SN LLAGYLAHEF   GTLFG+ W+       P  + + 
Subjt:  TKTMRLPPRRLMTSD-----------GPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWD------HPDVSMAA

Query:  SPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL
         P         E      + YVEVAN+L+  G H  GIVNP+QLAR L L
Subjt:  SPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQGIVNPTQLARLLNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGACTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGC
CCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTG
GCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTG
GCTAATTTGTTGAAACATGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTTGCTAAACCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGACTAATGACCTCAGATGGGCCCAGTTCCAGGCCCAATAAGAGGAAAGAGAGAAAGGGCTTTGATGATGAGGC
CCACCAACTGTCATTCACAGCTAAAGTATCGAAGCCGACACCGCCTCAATCCAACCACCTCCTAGCCGGCTACTTGGCTCACGAGTTCTTCACCAAAGGCACCCTCTTTG
GCCAAGCTTGGGATCATCCGGATGTGTCTATGGCGGCTTCACCACCTGACCTCAACGAGAAACGCCAAGCCGAGCTGCATCCCAAGAATTACCAGTCCTACGTGGAGGTG
GCTAATTTGTTGAAACATGGTGGGGCCCACTTTCAAGGTATTGTCAATCCCACCCAGCTAGCTCGGTTGCTAAACCTATGA
Protein sequenceShow/hide protein sequence
MNTTKTMRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSKPTPPQSNHLLAGYLAHEFFTKGTLFGQAWDHPDVSMAASPPDLNEKRQAELHPKNYQSYVEV
ANLLKHGGAHFQGIVNPTQLARLLNL