; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G000140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G000140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibonucloprotein
Genome locationCmo_Chr18:55383..57528
RNA-Seq ExpressionCmoCh18G000140
SyntenyCmoCh18G000140
Gene Ontology termsGO:0000469 - cleavage involved in rRNA processing (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0031118 - rRNA pseudouridine synthesis (biological process)
GO:0031120 - snRNA pseudouridine synthesis (biological process)
GO:0031429 - box H/ACA snoRNP complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0034513 - box H/ACA snoRNA binding (molecular function)
InterPro domainsIPR002415 - H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 - Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454886.1 PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Cucumis melo]4.2e-7594.34Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

XP_022955313.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita moschata]3.6e-79100Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

XP_022994544.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita maxima]8.9e-7898.74Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M SDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVV+EVSELTSSIF
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

XP_023541121.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Cucurbita pepo subsp. pepo]1.1e-7898.74Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVV+EVSELTSS+F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

XP_038894923.1 H/ACA ribonucleoprotein complex subunit 2-like protein [Benincasa hispida]4.2e-7593.71Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKSH KDK+KEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+++QVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

TrEMBL top hitse value%identityAlignment
A0A0A0LVP3 Ribonucloprotein6.5e-7493.71Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS LKDKEKE KKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE++IRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

A0A1S3C0C8 Ribonucloprotein2.0e-7594.34Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

A0A5D3BKS6 Ribonucloprotein2.0e-7594.34Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKS  KDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITHVPILCEE+DIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVL+QTKPNKGELGSTEQEKLKA+FDQVV+EVSELTS++F
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

A0A6J1GTK9 Ribonucloprotein1.8e-79100Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

A0A6J1K350 Ribonucloprotein4.3e-7898.74Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M SDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF
        YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVV+EVSELTSSIF
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF

SwissProt top hitse value%identityAlignment
P32495 H/ACA ribonucleoprotein complex subunit NHP21.4e-3348.72Show/hide
Query:  MGSDSEAEKSHLKDK--EKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIR
        MG D++  K   + K  +  + ++ A+ P AKPLA KKL K+ LK V+KA++ K +KRGVKEVVK++R+G+KG  VIAG+ISP DVI+H+P+LCE+  + 
Subjt:  MGSDSEAEKSHLKDK--EKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIR

Query:  YVYVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSEL
        Y+++PSK+DL  AG+TKRPT  V I    NK + G  ++E+ K  F++VV EV  L
Subjt:  YVYVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSEL

Q6PBV6 H/ACA ribonucleoprotein complex subunit 2-like protein4.5e-2444.44Show/hide
Query:  EKEKKKLLA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGST
        EK  ++L+A + PIA PLA +KL K+  K V+KAA+ K ++RGVKEV K I +G+ G  V AG+  PIDV  H+PI+CE+  + Y YVPSK DL ++  +
Subjt:  EKEKKKLLA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGST

Query:  KRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI
        KRPTC ++I  KP+         ++ K  +D+ V EV+ L   I
Subjt:  KRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI

Q8I7X7 H/ACA ribonucleoprotein complex subunit 2-like protein4.5e-2439.1Show/hide
Query:  DSEAEKSHLKDKEKEKKKLLA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYV
        + E    + +D+E+  + L   + PIA PLA +KL KR  K V+KA++ K +++G+++V K I++G++G  +IAG+ +PI+V  H+P++CE+A I Y YV
Subjt:  DSEAEKSHLKDKEKEKKKLLA-LAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYV

Query:  PSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI
        P+K+DL  A  +KRPTCCVL+  KPN         E  ++ +D+ +++V+ L   I
Subjt:  PSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI

Q9LEY9 H/ACA ribonucleoprotein complex subunit 2-like protein1.9e-5470.89Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKS  K+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI
        YVPSKEDLA AG+TKRPTCCVL+  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI

Q9P7H0 H/ACA ribonucleoprotein complex subunit nhp21.0e-2844.16Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        M  D +  K     +++    L AL PIAKPLA KKL K+ +K V+KA++ K + RGVKEVVK++R+G+KG  ++AG+ISP+DVI+H+P+LCE+ ++ Y+
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSEL
        Y  SKE L  A +TKRPT CV+I     K ++   E+   K  +++++ EV  L
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSEL

Arabidopsis top hitse value%identityAlignment
AT4G12600.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.4e-1432.81Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     +   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK

Query:  PNKGELGSTEQEKLKAEFDQVVSEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVSEVSEL

AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein7.4e-1432.03Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK
        P A PLA  +L    + LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     +   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK

Query:  PNKGELGSTEQEKLKAEFDQVVSEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVSEVSEL

AT5G08180.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.3e-5570.89Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKS  K+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI
        YVPSKEDLA AG+TKRPTCCVL+  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI

AT5G08180.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.3e-5570.89Show/hide
Query:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV
        MGSD+EAEKS  K+K   KK  + LAPIAKPLAGKKL KRT KL++KAA  KCLKRGVKEVVKSIRRGQKG CVIAGNISPIDVITH+PILCEEA + YV
Subjt:  MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYV

Query:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI
        YVPSKEDLA AG+TKRPTCCVL+  KP KG+L + E  KLK +++QV  ++ EL +S+
Subjt:  YVPSKEDLANAGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSI

AT5G20160.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4.4e-1432.81Show/hide
Query:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK
        P A PLA  +L    L LV++A  YK LK+G  E  K++ RG   F V+A +  P++++ H+P+L E+ ++ YV+VPSK+ L  A    RP     +   
Subjt:  PIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLANAGSTKRPTCCVLIQTK

Query:  PNKGELGSTEQEKLKAEFDQVVSEVSEL
               S E  +LK++   +   + +L
Subjt:  PNKGELGSTEQEKLKAEFDQVVSEVSEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGTGACAGCGAAGCAGAGAAGTCGCATCTGAAGGACAAAGAAAAGGAGAAGAAGAAGCTGTTGGCTCTTGCACCAATTGCTAAACCCCTTGCCGGCAAGAAGCT
CTGCAAGCGCACCCTAAAGCTTGTTCGTAAAGCTGCTGAATACAAGTGCTTGAAACGGGGGGTGAAGGAGGTGGTCAAAAGCATAAGGCGCGGACAAAAAGGGTTTTGTG
TAATAGCTGGAAACATATCCCCCATTGATGTGATCACTCATGTTCCAATCTTATGTGAAGAGGCAGACATTCGCTACGTATATGTTCCTTCCAAGGAAGATCTTGCCAAT
GCCGGGTCGACCAAGAGGCCAACATGTTGTGTTCTGATACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAGGCTGAGTTTGACCAAGT
TGTATCTGAAGTATCGGAACTTACAAGTAGTATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ACCCTAGTAATAAAGATGGGGCAGAAGCCATTATCCCGAGCAGACGCCCATATACGTCCTCCTCCCAAATCCTTCTTAGCTCCGGCAGTTCTATTTCATCCAACCCAATG
GGGAGTGACAGCGAAGCAGAGAAGTCGCATCTGAAGGACAAAGAAAAGGAGAAGAAGAAGCTGTTGGCTCTTGCACCAATTGCTAAACCCCTTGCCGGCAAGAAGCTCTG
CAAGCGCACCCTAAAGCTTGTTCGTAAAGCTGCTGAATACAAGTGCTTGAAACGGGGGGTGAAGGAGGTGGTCAAAAGCATAAGGCGCGGACAAAAAGGGTTTTGTGTAA
TAGCTGGAAACATATCCCCCATTGATGTGATCACTCATGTTCCAATCTTATGTGAAGAGGCAGACATTCGCTACGTATATGTTCCTTCCAAGGAAGATCTTGCCAATGCC
GGGTCGACCAAGAGGCCAACATGTTGTGTTCTGATACAAACTAAGCCAAACAAAGGGGAGCTTGGATCAACTGAACAAGAGAAACTCAAGGCTGAGTTTGACCAAGTTGT
ATCTGAAGTATCGGAACTTACAAGTAGTATTTTCTGAAGGGTAAAAGCCATTGTTCTTTAACTTACCCTCAATGTACCTGTAGCTTTCTTCTGCGAATTGGTTAGTAGTG
TGCTCTGTTTCACTTAAAATTTGATTGGCCTATGCCATTTCTACTGCAACCTTTTATCTCCGTTGATATTTTCCATCTAGTCCAGTAGTCACGTTTTAACATTCTTAGTT
TCTCAGATTGCGCAGAATCCAGTCGGTGGATTGATATTCTTTTAAGAAACTGAGTGATTCAATAGAATTGGCCAGAGAACATAGCCTTATTAAGTAGTGGAATCAATTAT
TTGTTGCAAGAACTTAGATAAATGCTGCATCATTTGATATTCAGCCATGTGTATCTAATGGACGGTTCAAACCACCTCTTTGAAGCGATGGTTTAAAGGACCTTGCAGTT
GGATTAAATTTCTCTAAAATTAGACGTCGGGTCCAATTCAAGTTTTCAATTCTTAATCTGTTCATTAATTTCTATTGCCGTGGCATTTGTGGACTAGTTTGTACGAAGA
Protein sequenceShow/hide protein sequence
MGSDSEAEKSHLKDKEKEKKKLLALAPIAKPLAGKKLCKRTLKLVRKAAEYKCLKRGVKEVVKSIRRGQKGFCVIAGNISPIDVITHVPILCEEADIRYVYVPSKEDLAN
AGSTKRPTCCVLIQTKPNKGELGSTEQEKLKAEFDQVVSEVSELTSSIF