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CmoCh18G000170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G000170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein MICROTUBULE BINDING PROTEIN 2C-like isoform X1
Genome locationCmo_Chr18:70330..70800
RNA-Seq ExpressionCmoCh18G000170
SyntenyCmoCh18G000170
Gene Ontology termsGO:0010497 - plasmodesmata-mediated intercellular transport (biological process)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR040289 - Microtubule binding protein 2C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572914.1 Protein MICROTUBULE BINDING PROTEIN 2C, partial [Cucurbita argyrosperma subsp. sororia]1.4e-33100Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
XP_022955318.1 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1 [Cucurbita moschata]1.4e-33100Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
XP_022955320.1 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X3 [Cucurbita moschata]1.4e-33100Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
XP_023541850.1 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X1 [Cucurbita pepo subsp. pepo]1.0e-3196.15Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADN+SWLSGDHNSSPTPLLSLSSLS+ASISTSATTA GANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
XP_023541851.1 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X2 [Cucurbita pepo subsp. pepo]1.0e-3196.15Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADN+SWLSGDHNSSPTPLLSLSSLS+ASISTSATTA GANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
TrEMBL top hitse value%identityAlignment
A0A6J1EBS3 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X22.7e-2276.92Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQD++AF D KSW SGDHN+SPT  L+ SSL    IS SATTA GANGNVDREL+NNLVE+VPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
A0A6J1GTL6 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X16.9e-34100Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
A0A6J1GUU0 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X36.9e-34100Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
A0A6J1JV99 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X18.5e-3296.15Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDN+AFADNKSWLSGDHNSSPTPLLS SSLSNASISTSATTA GANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
A0A6J1K4N9 protein MICROTUBULE BINDING PROTEIN 2C-like isoform X28.5e-3296.15Show/hide
Query:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
        MFEPQHFVDLQDN+AFADNKSWLSGDHNSSPTPLLS SSLSNASISTSATTA GANGNVDRELYNNLVEMVPLVQSLI
Subjt:  MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLI
SwissProt top hitse value%identityAlignment
Q9LEZ4 Protein MICROTUBULE BINDING PROTEIN 2C4.5e-0638.36Show/hide
Query:  EPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQ
        + QHF+DLQ ++ F D+ SWL+GD +   +P              SA   +  N N+DR L  +LVEMVPL++
Subjt:  EPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQ
Arabidopsis top hitse value%identityAlignment
AT5G08120.1 movement protein binding protein 2C3.2e-0738.36Show/hide
Query:  EPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQ
        + QHF+DLQ ++ F D+ SWL+GD +   +P              SA   +  N N+DR L  +LVEMVPL++
Subjt:  EPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGATAACAATGCTTTCGCCGATAATAAATCATGGCTTTCCGGCGACCACAACTCGTCCCCGACTCCGCTCCTCAGTCT
CTCTTCACTCTCCAATGCATCGATTTCAACTTCGGCAACTACTGCTGATGGCGCTAATGGAAATGTTGATCGCGAACTCTACAACAATCTCGTCGAGATGGTGCCTCTCG
TCCAGTCTCTCATTATGCAGGGGAATGATGGGGTTTGTCTGAATTTTGTTATGGTGGCACTACATGGGGCTGCGGGGTAG
mRNA sequenceShow/hide mRNA sequence
CCAACGACTCTCACCGTCCAATTTCTTTTCATTCTTTACTCTCCTGCTTTTCCTTTCCGGTTTGGTAACTTACGGAGGCCTCTCGTTTCTCTCAAAATCCTTCCTTATTA
CTCTAGATTTCGTCTTCTCAAATCATGTTTGAGCCCCAACATTTCGTCGATTTGCAAGATAACAATGCTTTCGCCGATAATAAATCATGGCTTTCCGGCGACCACAACTC
GTCCCCGACTCCGCTCCTCAGTCTCTCTTCACTCTCCAATGCATCGATTTCAACTTCGGCAACTACTGCTGATGGCGCTAATGGAAATGTTGATCGCGAACTCTACAACA
ATCTCGTCGAGATGGTGCCTCTCGTCCAGTCTCTCATTATGCAGGGGAATGATGGGGTTTGTCTGAATTTTGTTATGGTGGCACTACATGGGGCTGCGGGGTAG
Protein sequenceShow/hide protein sequence
MFEPQHFVDLQDNNAFADNKSWLSGDHNSSPTPLLSLSSLSNASISTSATTADGANGNVDRELYNNLVEMVPLVQSLIMQGNDGVCLNFVMVALHGAAG