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CmoCh18G000330 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G000330
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
Genome locationCmo_Chr18:194212..200443
RNA-Seq ExpressionCmoCh18G000330
SyntenyCmoCh18G000330
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR019377 - NADH-ubiquinone oxidoreductase, subunit 10
IPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137450.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Momordica charantia]2.1e-4894.06Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG-KNE
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG K E
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG-KNE

Query:  P
        P
Subjt:  P

XP_022924082.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Cucurbita moschata]1.4e-4998.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]3.8e-50100Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]8.5e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]3.2e-4997.92Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

TrEMBL top hitse value%identityAlignment
A0A6J1C6P3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B1.0e-4894.06Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG-KNE
        MGR+KTVEFDESPPDDFDAE+PYKDPVAMLEMREHIVREKWI+IEKAKILRE+LRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG K E
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG-KNE

Query:  P
        P
Subjt:  P

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B7.0e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like1.8e-50100Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like4.1e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B7.0e-5098.96Show/hide
Query:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKKTVEFDESPPDDFD EHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
Subjt:  MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial1.4e-0740.62Show/hide
Query:  PDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL
        P  FD    Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EGVNHL+KC HL ++YL
Subjt:  PDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYL

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B2.0e-4181.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A7.5e-4180.41Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS65.3e-4280.41Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLD+TRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.1 Complex I subunit NDUFS61.4e-4281.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG

AT3G18410.2 Complex I subunit NDUFS61.4e-4281.44Show/hide
Query:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG
        MGRKK + EF+ES PD FD E+PYKDPVAM+EMREHIVREKWI+IEKAKILREK++WCYR+EGVNH QKCRHLVQQYLDSTRG+GWGKD R  SLHG
Subjt:  MGRKKTV-EFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATCCAGTGGCGATGCTGGAGATGAGGGAACAT
ATTGTGAGAGAGAAATGGATCGAAATCGAAAAGGCGAAGATACTGAGGGAAAAACTAAGATGGTGCTACCGCATCGAAGGAGTCAACCATCTTCAGAAATGCCGC
CACCTTGTTCAGCAATACCTTGATTCCACTCGCGGCATCGGTTGGGGCAAGGATGGACGCCACCCATCTCTTCATGGAAAGAATGAACCTTAG
mRNA sequenceShow/hide mRNA sequence
AGGCACAGAGAAGAGGGAGGGGAAAAACTATGGGGAGGAAGAAGACAGTGGAGTTCGATGAATCACCGCCGGACGATTTCGATGCGGAGCATCCGTACAAGGATC
CAGTGGCGATGCTGGAGATGAGGGAACATATTGTGAGAGAGAAATGGATCGAAATCGAAAAGGCGAAGATACTGAGGGAAAAACTAAGATGGTGCTACCGCATCG
AAGGAGTCAACCATCTTCAGAAATGCCGCCACCTTGTTCAGCAATACCTTGATTCCACTCGCGGCATCGGTTGGGGCAAGGATGGACGCCACCCATCTCTTCATG
GAAAGAATGAACCTTAG
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDDFDAEHPYKDPVAMLEMREHIVREKWIEIEKAKILREKLRWCYRIEGVNHLQKCRHLVQQYLDSTRGIGWGKDGRHPSLHGKNEP