CuGenDBv2

Gene ID	CmoCh18G000340
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	cleavage stimulating factor 64-like
Genome location	Cmo_Chr18:200638..203432
RNA-Seq Expression	CmoCh18G000340
Synteny	CmoCh18G000340
Gene Ontology terms	GO:0009749 - response to glucose (biological process) GO:0031124 - mRNA 3'-end processing (biological process) GO:0035194 - posttranscriptional gene silencing by RNA (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR025742 - Cleavage stimulation factor subunit 2, hinge domain IPR026896 - Transcription termination and cleavage factor, C-terminal domain IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6572938.1 Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-190

98.63

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Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
        ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
Subjt:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA

Query:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLY--QAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQL
        PTGPNFRQHYPPQTGHNMNYQPA+PIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLY  QAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQL
Subjt:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLY--QAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQL

Query:  SGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        SGPPLIPSGTGQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  SGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

XP_022137042.1 RNA-binding protein 33 isoform X1 [Momordica charantia]

3.8e-156

79.4

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGL ESIAGMSKNQL+DIMSQMKTLIEQNQQQAKQILIQNP LTKALFQAQIMLGMVRPPQ IPS+QPS   HSQPST TT QSNIQPTQT 
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS
        A QISLQEQT                            N+QPQSAPLIPLQT QHPKGFEM QAN ISV QPSQ+PSVPPV PSAAQPPLLHQP +S+AS
Subjt:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS

Query:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV
        +QLQQPLQTAEIPHLPLQAPLPP SRAPTGPNF QHYP Q GHNMNYQPA       +P+FHSG+K PPGIGNSF PQGQS +PSQPPPQS+YQAGGSK+
Subjt:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV

Query:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        GTE MNQVGTSKP DRGPWM GPPENPTLPQQLSGPP  PS  GQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQR+QV QLQK+LRQ
Subjt:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

XP_022954570.1 cleavage stimulating factor 64-like [Cucurbita moschata]

2.3e-193

99.72

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
        ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
Subjt:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA

Query:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG
        PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG
Subjt:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG

Query:  PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

XP_022994126.1 cleavage stimulating factor 64-like [Cucurbita maxima]

8.1e-175

89.71

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Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVA TGL ESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSV+PSAPQH QPSTQTTQQSN QPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
        ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSR 
Subjt:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA

Query:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQ-GQSPLPSQPPPQ---------------SLYQAGGSKVGTEVMNQVGTSKPVDRGPW
        PTGP FRQHYPPQTGHNMNYQPA+P+FHSGSKFPPGIGNSFPQ G+  L + P                   LYQAGGSKVGTEVMNQVGTSKPVDRGPW
Subjt:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQ-GQSPLPSQPPPQ---------------SLYQAGGSKVGTEVMNQVGTSKPVDRGPW

Query:  MHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        MHGPP+NPTLPQQLSGPP+IPSGTGQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  MHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

XP_023541950.1 sialidase-like [Cucurbita pepo subsp. pepo]

2.4e-171

72.88

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Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSV--------------------------
        MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSV                          
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSV--------------------------

Query:  ----------------------------------------------------------------------------------------------QPSAPQ
                                                                                                      QPSAPQ
Subjt:  ----------------------------------------------------------------------------------------------QPSAPQ

Query:  HSQPSTQTTQQSNIQPTQTSASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPL
        HSQPSTQTTQQ NIQ TQTSASQISLQEQTGNIQ QSAPLI LQTLQHPKGFEMPQ NSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPL
Subjt:  HSQPSTQTTQQSNIQPTQTSASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPL

Query:  QTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVD
        QTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA+P+FHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVD
Subjt:  QTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVD

Query:  RGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        RGPWMHGPPEN TLPQQLSGPPLIPSGTGQMGPGNQPRP PPLSQEME MLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  RGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C742 RNA-binding protein 33 isoform X1

1.8e-156

79.4

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGL ESIAGMSKNQL+DIMSQMKTLIEQNQQQAKQILIQNP LTKALFQAQIMLGMVRPPQ IPS+QPS   HSQPST TT QSNIQPTQT 
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS
        A QISLQEQT                            N+QPQSAPLIPLQT QHPKGFEM QAN ISV QPSQ+PSVPPV PSAAQPPLLHQP +S+AS
Subjt:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS

Query:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV
        +QLQQPLQTAEIPHLPLQAPLPP SRAPTGPNF QHYP Q GHNMNYQPA       +P+FHSG+K PPGIGNSF PQGQS +PSQPPPQS+YQAGGSK+
Subjt:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV

Query:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        GTE MNQVGTSKP DRGPWM GPPENPTLPQQLSGPP  PS  GQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQR+QV QLQK+LRQ
Subjt:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

A0A6J1C968 RNA-binding protein 33 isoform X2

9.0e-156

79.15

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGL ESIAGMSKNQL+DIMSQMKTLIEQNQQQAKQILIQNP LTKALFQAQIMLGMVRPPQ IPS+QPS   HSQPST TT QSNIQPTQT 
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS
        A QISLQEQT                            N+QPQSAPLIPLQT QHPKGFEM QAN ISV QPSQ+PSVPPV PSAAQPPLLHQP +S+AS
Subjt:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS

Query:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV
        +QLQQPLQTAEIPHLPLQAPLPP SRAPTGPNF QHYP Q GHNMNYQPA       +P+FH G+K PPGIGNSF PQGQS +PSQPPPQS+YQAGGSK+
Subjt:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQPA-------RPIFHSGSKFPPGIGNSF-PQGQSPLPSQPPPQSLYQAGGSKV

Query:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        GTE MNQVGTSKP DRGPWM GPPENPTLPQQLSGPP  PS  GQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQR+QV QLQK+LRQ
Subjt:  GTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

A0A6J1E818 proline-rich protein 36-like

1.3e-154

78.09

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQV GTGL ESIAGMSKNQL+DIMSQMKTLIEQNQQQAKQILIQNP LTKALFQAQIMLGMVRPPQ IPSV PSA QHSQP T TTQQSNIQPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS
        A+QISLQEQT                            NIQP+SAPLIPLQT QHPKGF+MPQAN  S  QPSQIP+VPP+ PSAAQPPLLHQP +S+AS
Subjt:  ASQISLQEQTG---------------------------NIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSAS

Query:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQP-------ARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVG
        +QLQQPLQTAEIPHLP  APLP HSRAPTGPNF QHYPPQ GHNMNYQP       ++PIFHSG+K PPG+GNSFP GQS LPSQP PQS+YQAGGSK+G
Subjt:  MQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNYQP-------ARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVG

Query:  TEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        TE MNQVG+SKP DRGPWM GPPENPT PQQLSGPP IPS  GQMGPGNQPR APPLSQEME MLLQQVMSLTPEQINLLPPEQR+QV QLQK+LRQ
Subjt:  TEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

A0A6J1GSS5 cleavage stimulating factor 64-like

1.1e-193

99.72

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
        ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
Subjt:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA

Query:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG
        PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG
Subjt:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG

Query:  PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  PPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

A0A6J1JY85 cleavage stimulating factor 64-like

3.9e-175

89.71

Show/hide

Query:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS
        MAGKQVA TGL ESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQ IPSV+PSAPQH QPSTQTTQQSN QPTQTS
Subjt:  MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTS

Query:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA
        ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSR 
Subjt:  ASQISLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRA

Query:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQ-GQSPLPSQPPPQ---------------SLYQAGGSKVGTEVMNQVGTSKPVDRGPW
        PTGP FRQHYPPQTGHNMNYQPA+P+FHSGSKFPPGIGNSFPQ G+  L + P                   LYQAGGSKVGTEVMNQVGTSKPVDRGPW
Subjt:  PTGPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQ-GQSPLPSQPPPQ---------------SLYQAGGSKVGTEVMNQVGTSKPVDRGPW

Query:  MHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
        MHGPP+NPTLPQQLSGPP+IPSGTGQMGPGNQPRPAPPLSQEME MLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
Subjt:  MHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

SwissProt top hits

e value

%identity

Alignment

Q9M9G6 Cleavage stimulating factor 64

1.0e-07

28.49

Show/hide

Query:  AGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTSASQI--
        A   L+  +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S  P+  Q   PS  T   S+IQ  Q S   +  
Subjt:  AGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTSASQI--

Query:  SLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQP-SQIPSVPPVP-PSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRAPT
         L +++  +        P+Q                S  QP SQIP +   P PS+  PP   Q  + +A  Q QQ +  +       Q  +P ++  P 
Subjt:  SLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQP-SQIPSVPPVP-PSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRAPT

Query:  GPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG--
                                                   S +P Q  P S+ Q GG  V       +   K ++ GP  H     P+   ++    
Subjt:  GPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG--

Query:  PPLIPSG--TGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
           +P G  +  M P     P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  PPLIPSG--TGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G71800.1 cleavage stimulating factor 64

7.4e-09

28.49

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Query:  AGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTSASQI--
        A   L+  +A MS++QL +I+S +K +  QN++ A+Q+L+  P L KA+F AQ+MLG+V  PQV+ S  P+  Q   PS  T   S+IQ  Q S   +  
Subjt:  AGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTSASQI--

Query:  SLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQP-SQIPSVPPVP-PSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRAPT
         L +++  +        P+Q                S  QP SQIP +   P PS+  PP   Q  + +A  Q QQ +  +       Q  +P ++  P 
Subjt:  SLQEQTGNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQP-SQIPSVPPVP-PSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRAPT

Query:  GPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG--
                                                   S +P Q  P S+ Q GG  V       +   K ++ GP  H     P+   ++    
Subjt:  GPNFRQHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSG--

Query:  PPLIPSG--TGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
           +P G  +  M P     P   +S +++  LLQQVM+LTPEQ+ LL PEQ+ +V +LQ+ L+Q
Subjt:  PPLIPSG--TGQMGPGNQPRPAPPLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

AT1G73840.1 hydroxyproline-rich glycoprotein family protein

1.5e-57

44.86

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Query:  MAGKQVAGT-GLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQT-TQQSNIQPTQ
        MAGKQ+ G  GL  ++AGM+K+QL+DIMSQMKTLI+QN QQA++ILI+NP LTKALFQAQIMLGMV+PPQV P V+P A Q  Q S Q+   + N+Q   
Subjt:  MAGKQVAGT-GLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQT-TQQSNIQPTQ

Query:  TS-ASQISLQEQTGNIQPQS----------------APLIPLQTLQ------HP--KGFEMPQANSISVSQPSQIPSVPPVP---PSAAQPPLLHQPPMS
        +S     S+ E    +QPQ+                 P +   + Q      HP  +G   P   S+S  Q SQ+ + PP     P++ QPP  H    +
Subjt:  TS-ASQISLQEQTGNIQPQS----------------APLIPLQTLQ------HP--KGFEMPQANSISVSQPSQIPSVPPVP---PSAAQPPLLHQPPMS

Query:  SASMQLQQPLQTAEIPHLPLQAPLPPH---SRAPTGPNFR-QHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVG
        S++   QQP+ +   PH+  Q   P H    +A TGPN   QH+   T H      ++P++HSG++ P   G  FPQGQ  LPSQP     YQ GG   G
Subjt:  SASMQLQQPLQTAEIPHLPLQAPLPPH---SRAPTGPNFR-QHYPPQTGHNMNYQPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVG

Query:  TEVMNQVGTSKPVDRGP-WMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAP-PLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ
            NQ+      DRGP WM G  E+  +       P+ P    Q+GPG  P P P P+S EME  LLQQVMSLTPEQINLLPPEQR+QV QLQ++LRQ
Subjt:  TEVMNQVGTSKPVDRGP-WMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAP-PLSQEMEMMLLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

Sequences

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CDS sequence

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ATGGCCGGAAAGCAAGTTGCCGGCACTGGTCTATCGGAGAGCATCGCAGGAATGTCGAAGAACCAACTACATGATATAATGTCTCAAATGAAGACTCTGATCGAACAGAA
TCAACAGCAGGCGAAGCAAATCCTAATCCAAAACCCCGCCTTGACCAAAGCTCTTTTTCAGGCGCAGATTATGCTTGGGATGGTGCGGCCTCCTCAGGTAATTCCAAGCG
TCCAGCCTTCAGCCCCACAGCATTCTCAGCCATCAACACAAACAACTCAACAGTCAAATATTCAGCCAACTCAAACATCAGCAAGTCAAATAAGTTTGCAAGAACAGACA
GGGAACATCCAGCCTCAGTCAGCACCTCTGATTCCCCTGCAAACACTGCAGCATCCCAAGGGGTTTGAGATGCCCCAAGCGAATTCCATATCTGTCTCACAGCCATCTCA
AATTCCGAGTGTACCTCCGGTACCTCCATCTGCTGCTCAGCCACCTTTACTTCATCAACCCCCGATGTCAAGTGCTTCCATGCAGCTGCAGCAGCCATTACAAACAGCTG
AAATTCCCCATCTGCCTCTACAGGCCCCATTGCCCCCACATTCCAGAGCTCCTACGGGTCCAAATTTTCGTCAGCACTACCCCCCTCAAACGGGGCACAATATGAATTAC
CAACCTGCTCGACCCATTTTTCATTCAGGATCCAAATTCCCTCCTGGTATAGGAAATTCATTTCCCCAGGGACAGTCGCCACTTCCTAGTCAACCACCCCCTCAGTCATT
GTATCAGGCTGGAGGTTCTAAAGTAGGTACAGAAGTCATGAATCAAGTTGGAACTTCAAAGCCTGTGGACAGAGGGCCTTGGATGCATGGCCCTCCAGAGAATCCTACAC
TTCCACAGCAACTCTCAGGACCACCACTAATACCATCAGGCACTGGCCAGATGGGCCCTGGCAATCAGCCTCGTCCTGCACCACCGTTGAGTCAGGAGATGGAGATGATG
CTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTCCTGCCTCCAGAGCAAAGGAGTCAAGTGCATCAGCTACAGAAGATGCTTCGCCAATGA

mRNA sequence

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TTGAGAAGGAACAATCTTTGGTCTCAGTTGGCGTTGGGACGTCGAACATGGCCGGAAAGCAAGTTGCCGGCACTGGTCTATCGGAGAGCATCGCAGGAATGTCGAAGAAC
CAACTACATGATATAATGTCTCAAATGAAGACTCTGATCGAACAGAATCAACAGCAGGCGAAGCAAATCCTAATCCAAAACCCCGCCTTGACCAAAGCTCTTTTTCAGGC
GCAGATTATGCTTGGGATGGTGCGGCCTCCTCAGGTAATTCCAAGCGTCCAGCCTTCAGCCCCACAGCATTCTCAGCCATCAACACAAACAACTCAACAGTCAAATATTC
AGCCAACTCAAACATCAGCAAGTCAAATAAGTTTGCAAGAACAGACAGGGAACATCCAGCCTCAGTCAGCACCTCTGATTCCCCTGCAAACACTGCAGCATCCCAAGGGG
TTTGAGATGCCCCAAGCGAATTCCATATCTGTCTCACAGCCATCTCAAATTCCGAGTGTACCTCCGGTACCTCCATCTGCTGCTCAGCCACCTTTACTTCATCAACCCCC
GATGTCAAGTGCTTCCATGCAGCTGCAGCAGCCATTACAAACAGCTGAAATTCCCCATCTGCCTCTACAGGCCCCATTGCCCCCACATTCCAGAGCTCCTACGGGTCCAA
ATTTTCGTCAGCACTACCCCCCTCAAACGGGGCACAATATGAATTACCAACCTGCTCGACCCATTTTTCATTCAGGATCCAAATTCCCTCCTGGTATAGGAAATTCATTT
CCCCAGGGACAGTCGCCACTTCCTAGTCAACCACCCCCTCAGTCATTGTATCAGGCTGGAGGTTCTAAAGTAGGTACAGAAGTCATGAATCAAGTTGGAACTTCAAAGCC
TGTGGACAGAGGGCCTTGGATGCATGGCCCTCCAGAGAATCCTACACTTCCACAGCAACTCTCAGGACCACCACTAATACCATCAGGCACTGGCCAGATGGGCCCTGGCA
ATCAGCCTCGTCCTGCACCACCGTTGAGTCAGGAGATGGAGATGATGCTACTTCAACAAGTCATGAGTCTCACACCAGAACAAATTAATCTCCTGCCTCCAGAGCAAAGG
AGTCAAGTGCATCAGCTACAGAAGATGCTTCGCCAATGAACAGTGTTCTGGAAGGGAGGCAATCTCATCTTGATTTATCCCTCTTCCTTTCCCCTCAACTCTTGCATCGT
TGGACATCCTCAAAATGGCTTTTAGGCTTCTAGGGCAAGTTTTTTACTATTGTCTAACTTTTAAGTATTGACATTCAGATTGATATATTACAGTTATAAATTTTGGCTTG
CTGCCTATCCGTAAGAGTATTTGTTTGCTGTCGAATTCGCC

Protein sequence

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MAGKQVAGTGLSESIAGMSKNQLHDIMSQMKTLIEQNQQQAKQILIQNPALTKALFQAQIMLGMVRPPQVIPSVQPSAPQHSQPSTQTTQQSNIQPTQTSASQISLQEQT
GNIQPQSAPLIPLQTLQHPKGFEMPQANSISVSQPSQIPSVPPVPPSAAQPPLLHQPPMSSASMQLQQPLQTAEIPHLPLQAPLPPHSRAPTGPNFRQHYPPQTGHNMNY
QPARPIFHSGSKFPPGIGNSFPQGQSPLPSQPPPQSLYQAGGSKVGTEVMNQVGTSKPVDRGPWMHGPPENPTLPQQLSGPPLIPSGTGQMGPGNQPRPAPPLSQEMEMM
LLQQVMSLTPEQINLLPPEQRSQVHQLQKMLRQ

CmoCh18G000340 (gene) of Cucurbita moschata (Rifu) v1 genome