; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G001180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G001180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionD-ribose-binding periplasmic protein
Genome locationCmo_Chr18:827988..829062
RNA-Seq ExpressionCmoCh18G001180
SyntenyCmoCh18G001180
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012230.1 hypothetical protein SDJN02_24982, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-8799.42Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVDAASLIIQHP GKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

XP_008438114.1 PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo]3.8e-6677.53Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D ASLIIQHP GK+DRLYWPVNAGEIMK+NPGHYVALLIST++C SET+  H RRRDN  QTNSTN NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS
         TQDVLQGLKAKQEAK K+N+LDFEGK    EK +EG+ NQ MK+ERNR       V ++AKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS

XP_022954945.1 uncharacterized protein LOC111457051 [Cucurbita moschata]7.9e-88100Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

XP_022994673.1 uncharacterized protein LOC111490314 [Cucurbita maxima]2.5e-8698.26Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVD ASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQ NSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

XP_023542081.1 uncharacterized protein LOC111802061 [Cucurbita pepo subsp. pepo]8.7e-8798.84Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLIS+EICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKK+MLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

TrEMBL top hitse value%identityAlignment
A0A0A0LU27 Uncharacterized protein2.4e-6676.97Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D ASLIIQHP GK+DRLYWPVNAGEIMK+NPGHYVALLIST++C SET+  H RRRDN  QTNSTN NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS
         TQDVLQGLKAKQEAK K+N+L+FEGK+   EK +EG+ NQ MK+ERNR       V ++AKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS

A0A1S3AV95 uncharacterized protein LOC1034833161.8e-6677.53Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D ASLIIQHP GK+DRLYWPVNAGEIMK+NPGHYVALLIST++C SET+  H RRRDN  QTNSTN NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS
         TQDVLQGLKAKQEAK K+N+LDFEGK    EK +EG+ NQ MK+ERNR       V ++AKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS

A0A5D3BH89 Uncharacterized protein1.8e-6677.53Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+D ASLIIQHP GK+DRLYWPVNAGEIMK+NPGHYVALLIST++C SET+  H RRRDN  QTNSTN NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS
         TQDVLQGLKAKQEAK K+N+LDFEGK    EK +EG+ NQ MK+ERNR       V ++AKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNR------AVCSSAKSRGWQPSLQSISESGS

A0A6J1GTT7 uncharacterized protein LOC1114570513.8e-88100Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

A0A6J1K5T5 uncharacterized protein LOC1114903141.2e-8698.26Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVD ASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQ NSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
        KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10530.1 unknown protein1.8e-2640.12Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAV+AA L++QHP G IDR Y  V+  E+M   PGHYV+L+I   +   E  ++    + + ++       +VR TR++LL+PT++LVLG  YRL+
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
         +Q+V++ L+ K+ AK KK+ ++     +KF  +   +  Q  +    R   S  KS+ W+PSLQSISE+ S
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

AT1G60010.1 unknown protein3.6e-3042.7Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNS----VRLTRIKLLKPTDSLVLGQI
        MGNCQAVDAA+L++QHP GKIDR Y PV+  EIM+  PGHYV+L+I                ++    T +T+  S    VR TR+KLL+PT++LVLG  
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNS----VRLTRIKLLKPTDSLVLGQI

Query:  YRLVKTQDVLQGLKAKQEAKMKKNMLDFE------GKLQKFEKETEGDSNQIMKSERNRAV---CSSAKSRGWQPSLQSISESGS
        YRL+ +Q+V++ L+AK+ AK KK+  +           +K ++E++ + N   K E+ R+V    +S++S+ W+PSLQSISE+ S
Subjt:  YRLVKTQDVLQGLKAKQEAKMKKNMLDFE------GKLQKFEKETEGDSNQIMKSERNRAV---CSSAKSRGWQPSLQSISESGS

AT5G50090.1 unknown protein6.5e-3247.46Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVD A ++IQHP GK ++L  PV+A  +MK NPGH V+LLIST   SS                +S +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFE-----KETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
         T++V++GL AK+ +K+KK     + KL+  +     K    D  Q+ K E+ R    S  SR WQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQKFE-----KETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

AT5G50090.2 unknown protein1.5e-3148.28Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVD A ++IQHP GK ++L  PV+A  +MK NPGH V+LLIST   SS                +S +   +RLTRIKLL+PTD+LVLG +YRL+
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQ--KFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS
         T++V++GL AK+ +K+KK     + KL+  K    T+ D N+  + ER+R       SR WQPSLQSISE GS
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDFEGKLQ--KFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS

AT5G62900.1 unknown protein4.9e-2740.66Show/hide
Query:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA +AA+ +IQ P GK  R Y  VNA E++KS+PGH+VALL+S+ +                      +  S+R+TRIKLL+P+D+L+LG +YRL+
Subjt:  MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  KTQDVLQGLKAKQEAKMKKNMLDF---EGKLQKFEKETEGDSN---QIMKSERNRAVCSSA----KSRGWQPSLQSISESGS
         +++V++G++AK+  KMKK   +F   E ++      +E  S+   Q    E+ R + ++     K R WQPSLQSISES S
Subjt:  KTQDVLQGLKAKQEAKMKKNMLDF---EGKLQKFEKETEGDSN---QIMKSERNRAVCSSA----KSRGWQPSLQSISESGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCCAAGCCGTAGACGCAGCATCTCTAATCATACAACACCCAGCCGGAAAAATCGACCGATTATACTGGCCAGTGAACGCCGGCGAGATTATGAAGTCAAA
TCCCGGCCACTACGTTGCTCTTCTCATCTCCACCGAAATCTGCTCATCGGAAACCTCTGACCTTCACTGCCGCCGCCGCGATAACCACCGGCAAACAAACAGCACGAATT
CCAACTCGGTCCGTTTAACCCGAATCAAGCTGCTCAAGCCCACCGATTCCCTCGTTCTAGGCCAAATTTACCGCCTCGTCAAAACCCAAGACGTTTTGCAGGGTTTGAAA
GCCAAACAGGAAGCGAAAATGAAGAAAAACATGTTGGATTTTGAGGGAAAACTTCAAAAATTTGAGAAGGAAACTGAAGGAGATAGTAATCAGATAATGAAAAGTGAGAG
AAACAGAGCAGTGTGTTCATCGGCTAAATCGAGAGGATGGCAGCCGTCTCTGCAAAGCATTTCAGAGAGTGGAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATCTTCTTCTTCATCTTCATCCTCGCCGCCGCAGTTCCCAATTCTAGAGAGAGAAGCAGATTACCAGTAGAGAGAGAAACAAAACCGATGGGAAATTGCCAAGCCGTAGA
CGCAGCATCTCTAATCATACAACACCCAGCCGGAAAAATCGACCGATTATACTGGCCAGTGAACGCCGGCGAGATTATGAAGTCAAATCCCGGCCACTACGTTGCTCTTC
TCATCTCCACCGAAATCTGCTCATCGGAAACCTCTGACCTTCACTGCCGCCGCCGCGATAACCACCGGCAAACAAACAGCACGAATTCCAACTCGGTCCGTTTAACCCGA
ATCAAGCTGCTCAAGCCCACCGATTCCCTCGTTCTAGGCCAAATTTACCGCCTCGTCAAAACCCAAGACGTTTTGCAGGGTTTGAAAGCCAAACAGGAAGCGAAAATGAA
GAAAAACATGTTGGATTTTGAGGGAAAACTTCAAAAATTTGAGAAGGAAACTGAAGGAGATAGTAATCAGATAATGAAAAGTGAGAGAAACAGAGCAGTGTGTTCATCGG
CTAAATCGAGAGGATGGCAGCCGTCTCTGCAAAGCATTTCAGAGAGTGGAAGCTAAGGATTTAAGGTTTATGATTCGAAAATGTAATGATGGGAAGAAATTGTGGGAGTT
TTAGAGTGAGATTTGTGCATAAAAAGGTGTAGTTCTTACAGAAACAGAGCAGAGGTCAAAGGGAACACTGTGCTTTGAATTTCATTTGAGAAACTGAAAATTGGGTTTGG
AAGATTGAAATAATTCCTGAGTTGTTTGTGTTCTTGTGTTCTTGTTGAGATAGATGAACATTTCTTGTTTGTTTGTTCGGTTTCTTGAATAGTTTGAATGGAATAGAAAG
AAATTCCATGGAGGAG
Protein sequenceShow/hide protein sequence
MGNCQAVDAASLIIQHPAGKIDRLYWPVNAGEIMKSNPGHYVALLISTEICSSETSDLHCRRRDNHRQTNSTNSNSVRLTRIKLLKPTDSLVLGQIYRLVKTQDVLQGLK
AKQEAKMKKNMLDFEGKLQKFEKETEGDSNQIMKSERNRAVCSSAKSRGWQPSLQSISESGS