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CmoCh18G001530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G001530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:1066647..1066937
RNA-Seq ExpressionCmoCh18G001530
SyntenyCmoCh18G001530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573084.1 hypothetical protein SDJN03_26971, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3495.06Show/hide
Query:  VAHSIPQFMKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELRAVAVGLV
        +AHSIPQFMKNKPEIEDGDRYLEI KAVA+AWQSHTGSSKPATEFAAHRRNCR+NPSRFKNEAVRKRRPAMELRAVAVGLV
Subjt:  VAHSIPQFMKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELRAVAVGLV

KAG6584197.1 hypothetical protein SDJN03_20129, partial [Cucurbita argyrosperma subsp. sororia]6.9e-1779.66Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR
        MKNKP +ED D +LEILKAVAQAWQSHTG+SKPA+EF AHRRNCR NPSRFK EA+R R
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR

XP_022137185.1 uncharacterized protein LOC111008716 [Momordica charantia]2.6e-1675.81Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPA
        MK KPE+ED  R+LEILKAVAQAW SHTGSSKPA EF AHRRNCR  PSRFK EA+R R  A
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPA

XP_022923731.1 uncharacterized protein LOC111431350 [Cucurbita moschata]6.9e-1779.66Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR
        MKNKP +ED D +LEILKAVAQAWQSHTG+SKPA+EF AHRRNCR NPSRFK EA+R R
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR

XP_023519325.1 uncharacterized protein LOC111782756 [Cucurbita pepo subsp. pepo]6.9e-1779.66Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR
        MKNKP +ED D +LEILKAVAQAWQSHTG+SKPA+EF AHRRNCR NPSRFK EA+R R
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR

TrEMBL top hitse value%identityAlignment
A0A0A0LTM3 Uncharacterized protein6.6e-1369.35Show/hide
Query:  MKNKP---EIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR
        MK KP   ++ D DR+LEILKAVAQAW SHTG+SKPA+EF AHRRN R  PSRFK EA+R R
Subjt:  MKNKP---EIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR

A0A5A7UNW1 Uncharacterized protein1.1e-1262.32Show/hide
Query:  MKNKP---EIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELR
        MK KP   ++ D DR+LEILKAVAQAW +HTG+SKPA+EF AHRRN R  PSRFK EA+R R  ++  R
Subjt:  MKNKP---EIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELR

A0A6J1C5Z6 uncharacterized protein LOC1110087161.3e-1675.81Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPA
        MK KPE+ED  R+LEILKAVAQAW SHTGSSKPA EF AHRRNCR  PSRFK EA+R R  A
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPA

A0A6J1E7J5 uncharacterized protein LOC1114313503.4e-1779.66Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR
        MKNKP +ED D +LEILKAVAQAWQSHTG+SKPA+EF AHRRNCR NPSRFK EA+R R
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKR

A0A6J1KNC1 uncharacterized protein LOC1114957272.2e-1671.21Show/hide
Query:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELR
        MKNK  +ED D +LEILKAVAQAWQSHTG+SKPA+EF AHRRNCR NPSRFK EA+R R     +R
Subjt:  MKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24700.1 unknown protein2.5e-0443.1Show/hide
Query:  KNKPEIEDGDRYLEILKAVAQAWQSHTGSSK-PATEFAAHRRNC--RNNPSRFKNEAV
        +N+ E E+  + LE++KA AQAW SH+ +SK    EF A R++   +   SRFK EA+
Subjt:  KNKPEIEDGDRYLEILKAVAQAWQSHTGSSK-PATEFAAHRRNC--RNNPSRFKNEAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTGATTATGGTCCACAGTCCAAGTACGCAAGATGGAACGTGGCCCATTCCATTCCTCAATTCATGAAGAACAAACCAGAGATTGAAGACGGCGATCGT
TACCTCGAAATCCTCAAGGCGGTGGCGCAGGCCTGGCAGAGCCACACCGGCAGTTCAAAACCGGCAACTGAATTCGCCGCCCATCGCCGGAATTGCAGAAACAAT
CCATCTCGGTTCAAGAACGAGGCGGTGCGGAAGCGGCGACCTGCGATGGAACTTCGCGCAGTCGCTGTGGGACTCGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTGATTATGGTCCACAGTCCAAGTACGCAAGATGGAACGTGGCCCATTCCATTCCTCAATTCATGAAGAACAAACCAGAGATTGAAGACGGCGATCGT
TACCTCGAAATCCTCAAGGCGGTGGCGCAGGCCTGGCAGAGCCACACCGGCAGTTCAAAACCGGCAACTGAATTCGCCGCCCATCGCCGGAATTGCAGAAACAAT
CCATCTCGGTTCAAGAACGAGGCGGTGCGGAAGCGGCGACCTGCGATGGAACTTCGCGCAGTCGCTGTGGGACTCGTATGA
Protein sequenceShow/hide protein sequence
MVADYGPQSKYARWNVAHSIPQFMKNKPEIEDGDRYLEILKAVAQAWQSHTGSSKPATEFAAHRRNCRNNPSRFKNEAVRKRRPAMELRAVAVGLV