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CmoCh18G001560 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G001560
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmajor pollen allergen Ole e 6-like
Genome locationCmo_Chr18:1084312..1084779
RNA-Seq ExpressionCmoCh18G001560
SyntenyCmoCh18G001560
Gene Ontology termsNA
InterPro domainsIPR015333 - Pollen allergen ole e 6
IPR036466 - Pollen allergen ole e 6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573087.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia]3.5e-39100Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

KAG6575285.1 Major pollen allergen Ole e 6, partial [Cucurbita argyrosperma subsp. sororia]6.8e-1962.35Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL
        MA KMIA+LL+C +VVAALQ+ +A  +A +A      EAKF+AK+R CY  CEKEC++ G+ QSFCEVKCDEDCG+KE ADKLH+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL

XP_008456958.1 PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]4.7e-2062.5Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MA KMIA+ LMC +VVAALQ      +A   D V   EAKFDAK++SC++ CEKEC++NGS QS+CEVKCDEDC +KEVADKLH++L+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

XP_022929811.1 major pollen allergen Ole e 6-like [Cucurbita moschata]6.8e-1962.35Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL
        MA KMIA+LL+C +VVAALQ+ +A  +A +A      EAKF+AK+R CY  CEKEC++ G+ QSFCEVKCDEDCG+KE ADKLH+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL

XP_038891517.1 major pollen allergen Ole e 6-like [Benincasa hispida]3.0e-1963.64Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MA KM+A+ LMC +VVAALQ      A  + D V   EAKFDAK++SCY  CEKEC+ NGS QSFCEVKCDEDC +KEVADKLH+ L+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

TrEMBL top hitse value%identityAlignment
A0A0A0KPA7 Uncharacterized protein3.6e-1860.23Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MANKMIA+ LMC +VVAALQ      A  + + V   EAKFDAK++SC+  CEKEC+  GS QS+CEVKCDEDC +KE ADKLH++L+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

A0A1S3C530 major pollen allergen Ole e 6-like2.3e-2062.5Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MA KMIA+ LMC +VVAALQ      +A   D V   EAKFDAK++SC++ CEKEC++NGS QS+CEVKCDEDC +KEVADKLH++L+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

A0A5D3BCS2 Major pollen allergen Ole e 6-like2.3e-2062.5Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN
        MA KMIA+ LMC +VVAALQ      +A   D V   EAKFDAK++SC++ CEKEC++NGS QS+CEVKCDEDC +KEVADKLH++L+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN

A0A6J1EQ21 major pollen allergen Ole e 6-like3.3e-1962.35Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL
        MA KMIA+LL+C +VVAALQ+ +A  +A +A      EAKF+AK+R CY  CEKEC++ G+ QSFCEVKCDEDCG+KE ADKLH+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL

A0A6J1JXL5 major pollen allergen Ole e 6-like2.1e-1860Show/hide
Query:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL
        MA KMIA+LL+C +V+AALQ+ +A  +  +A      EAKF+AK+R CY  CEKEC++ G+ QSFCEVKCDEDCG+KE ADKLH+
Subjt:  MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHL

SwissProt top hitse value%identityAlignment
O24172 Major pollen allergen Ole e 66.2e-0752.38Show/hide
Query:  DAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKL
        +A+F+ CY  C KEC D G+  +FCE+KCD DC  K+V +KL
Subjt:  DAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAAGATGATCGCAATGCTTTTGATGTGCACTCTCGTCGTCGCCGCTCTGCAACTCCCCGCCGCCGCCACCGCCGCCACCGACGCTGACATCGTCGAGGTGGC
GGAGGCCAAATTTGACGCGAAATTCAGGTCTTGCTACAGACATTGCGAGAAGGAGTGCATCGACAATGGCAGCAGCCAAAGCTTCTGCGAAGTTAAATGCGACGAAGATT
GCGGTGACAAGGAAGTTGCCGATAAGCTTCATCTTGATTTGAATTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATCAAACGCCGGTGAAGCCTCAAAATCTCACCCAAGATTTTAAAGCATCACCAAACGCAAGACCAGAAAAATGGCGAACAAGATGATCGCAATGCTTTTGATGTGC
ACTCTCGTCGTCGCCGCTCTGCAACTCCCCGCCGCCGCCACCGCCGCCACCGACGCTGACATCGTCGAGGTGGCGGAGGCCAAATTTGACGCGAAATTCAGGTCTTGCTA
CAGACATTGCGAGAAGGAGTGCATCGACAATGGCAGCAGCCAAAGCTTCTGCGAAGTTAAATGCGACGAAGATTGCGGTGACAAGGAAGTTGCCGATAAGCTTCATCTTG
ATTTGAATTGAATAATGGGGGACAAAAGCAAGAAGATGAAGAGCTTTCCAGAG
Protein sequenceShow/hide protein sequence
MANKMIAMLLMCTLVVAALQLPAAATAATDADIVEVAEAKFDAKFRSCYRHCEKECIDNGSSQSFCEVKCDEDCGDKEVADKLHLDLN