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CmoCh18G001630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G001630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFumarate reductase subunit D
Genome locationCmo_Chr18:1149969..1151528
RNA-Seq ExpressionCmoCh18G001630
SyntenyCmoCh18G001630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAF2143403.1 unnamed protein product, partial [Brassica napus]3.1e-0853.85Show/hide
Query:  AIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        A+  +ETT     PSFR+I GPY LE    DWCG +PNW +LPM+G  GG+G
Subjt:  AIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

GER36395.1 fumarate reductase subunit D [Striga asiatica]1.5e-0555.1Show/hide
Query:  GDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        G+ETT A   PS R + GP  LER+  +  GR PNWWRLPM GS  G G
Subjt:  GDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

KAF3499208.1 hypothetical protein F2Q69_00039568 [Brassica cretica]4.1e-0847.54Show/hide
Query:  MSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        MSWVF   LA+  +ETT     PSF++I GPY LE    D C ++P+W + PM+G  GG+G
Subjt:  MSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

PON72322.1 hypothetical protein PanWU01x14_067130 [Parasponia andersonii]1.4e-0848.33Show/hide
Query:  SWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        SW  + S  +  DETTR  +WP   +IRGPYL + A  D CG  P+W R P+ G LGG+G
Subjt:  SWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

THU51468.1 hypothetical protein C4D60_Mb06t31360 [Musa balbisiana]4.9e-0953.97Show/hide
Query:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAP-NWWRLPMMGSLGGEG
        +MSWVF+ S A   DETTR    PSFRS+ GP  L++A  + CGR P  W +LPM+GSL G G
Subjt:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAP-NWWRLPMMGSLGGEG

TrEMBL top hitse value%identityAlignment
A0A2N9IIE0 Uncharacterized protein1.3e-0748.39Show/hide
Query:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        M+SWVF  S A +G ETT    WPS   + GPY L +     CGR P+ WRLPM+G   G G
Subjt:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

A0A2P5DG80 Uncharacterized protein6.8e-0948.33Show/hide
Query:  SWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        SW  + S  +  DETTR  +WP   +IRGPYL + A  D CG  P+W R P+ G LGG+G
Subjt:  SWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

A0A4S8IS04 Uncharacterized protein2.3e-0953.97Show/hide
Query:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAP-NWWRLPMMGSLGGEG
        +MSWVF+ S A   DETTR    PSFRS+ GP  L++A  + CGR P  W +LPM+GSL G G
Subjt:  MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAP-NWWRLPMMGSLGGEG

A0A5A7PU91 Fumarate reductase subunit D7.1e-0655.1Show/hide
Query:  GDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        G+ETT A   PS R + GP  LER+  +  GR PNWWRLPM GS  G G
Subjt:  GDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

A0A803NWS8 Uncharacterized protein1.2e-0548.28Show/hide
Query:  FIT-SLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG
        F+T S  I  DETTR   WP  +SI GPYL +    +WCG      RLP+ G+LGG+G
Subjt:  FIT-SLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCATGGGTCTTCATCACTTCTTTAGCTATTTTTGGTGATGAAACCACAAGGGCTTGTGTCTGGCCAAGCTTTAGGAGCATTAGAGGGCCATATTTGTTAGAAAG
AGCTGCCATGGATTGGTGTGGCAGGGCACCTAATTGGTGGAGGTTGCCTATGATGGGTAGCCTTGGTGGTGAAGGAGACATCGAGCCCATTTAA
mRNA sequenceShow/hide mRNA sequence
ACAAACAAACCTAAAAAGAATTAGTACGATTGTTTTGAGGGTTAAATGGACAGAAAAGAAACCAGTATGATTGCTTTGAGCTGGTCGGAAGAGAAATGATAGTCACCCAT
GTCATCCTGTTGGAGCTGCAACATGATATCCACAAAATCCTTCTTAAATTCATCCGTTAGAACACCGGCTCTTATTTTTTCCTTGTGTTCTTCAACCACTTTACTAAAAA
ATGTATCCAATGTTTTGAAGCAATCTTTCAACTCCTTATTGAACCCTCTAATAATATCAATCCACCAAAGAGAAGGAAAAAGATCAGCTACACAAAACGCCACAATTAGC
ACCATAAGCTTTCTGGCTGTCTCTCCAAATTGACTATTCCCATTTTCATCCTCAAATTTCTCTCCCAAAACGCATCTAGACACTATATTGTTCGATGTTTGAAGGAACAA
CTGACTTAGATTCACAGCCTCACCGCCCACACTAGCCTTACGAATCCTGTCCATGAGCCCACCAACTTCCTCATCCCTTACGTACTGAAAGGAGTCCACTCTTTTGACAC
TAAAAAGCTCAAGAGCGCACACTTTCCTGGCTTGTCTCCAGTACTCACTACAATGAACAAAGGCAATGTCTTGACATTGGTACAGCAATTTCTTTGAGGCAGTAGTTTGT
AGTCTGTTGGAGAATATGATGTCATGGGTCTTCATCACTTCTTTAGCTATTTTTGGTGATGAAACCACAAGGGCTTGTGTCTGGCCAAGCTTTAGGAGCATTAGAGGGCC
ATATTTGTTAGAAAGAGCTGCCATGGATTGGTGTGGCAGGGCACCTAATTGGTGGAGGTTGCCTATGATGGGTAGCCTTGGTGGTGAAGGAGACATCGAGCCCATTTAA
Protein sequenceShow/hide protein sequence
MMSWVFITSLAIFGDETTRACVWPSFRSIRGPYLLERAAMDWCGRAPNWWRLPMMGSLGGEGDIEPI