CuGenDBv2

Gene ID	CmoCh18G001860
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	RPM1-interacting protein 4-like
Genome location	Cmo_Chr18:1273541..1274753
RNA-Seq Expression	CmoCh18G001860
Synteny	CmoCh18G001860
Gene Ontology terms	NA
InterPro domains	IPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site IPR040387 - RPM1-interacting protein 4/NOI4

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008439256.1 PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]

2.0e-23

81.82

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

XP_008439265.1 PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]

7.8e-23

81.54

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPK
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

XP_022954832.1 RPM1-interacting protein 4-like [Cucurbita moschata]

4.2e-29

100

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

XP_022994173.1 RPM1-interacting protein 4-like [Cucurbita maxima]

3.6e-28

98.48

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

XP_038894677.1 protein NOI4 isoform X2 [Benincasa hispida]

1.0e-22

81.82

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ AN V  Q +EP +NNES+PQ PPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYE6 RPM1-interacting protein 4 isoform X2

3.8e-23

81.54

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPK
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

A0A1S3AZ04 RPM1-interacting protein 4 isoform X1

9.9e-24

81.82

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ PPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

A0A6J1C6I4 uncharacterized protein LOC111008714 isoform X1

6.4e-23

72.73

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Query:  GRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        G  L     ++QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ A+ VS Q NE  YNNE+FPQ  PPK
Subjt:  GRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

A0A6J1GRZ4 RPM1-interacting protein 4-like

2.1e-29

100

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

A0A6J1K4F5 RPM1-interacting protein 4-like

1.7e-28

98.48

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        QDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

SwissProt top hits

e value

%identity

Alignment

O22633 Protein NOI4

3.1e-14

64.62

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   S S     +    P  P PK
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

Q8GYN5 RPM1-interacting protein 4

6.2e-07

36.79

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Query:  RGEQHWKKDKGRPLPKFGEWDDKGRPLPK----FGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQS
        R  Q+   D   PL K   +D  G+  PK      +   +K   +PKFG+WD NNP+SA+G+T IFNK R+E+    S AN VS  S  P + +   P +
Subjt:  RGEQHWKKDKGRPLPKFGEWDDKGRPLPK----FGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQS

Query:  PPPKVC
             C
Subjt:  PPPKVC

Arabidopsis top hits

e value

%identity

Alignment

AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein

2.4e-14

61.54

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        DKGRPLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK  G      S   +EP YN        P K
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein

2.2e-15

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Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANM-VSSQSNEPAYNNESFPQSPPPKVCLL
        DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   SS+ +  +   +     P  K+ LL
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANM-VSSQSNEPAYNNESFPQSPPPKVCLL

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein

6.8e-17

54.44

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Query:  KFGEWDDKGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANM-VSSQSNEPAYNNESFPQSPPPKVCLL
        +FGE DD   P     +W +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   SS+ +  +   +     P  K+ LL
Subjt:  KFGEWDDKGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANM-VSSQSNEPAYNNESFPQSPPPKVCLL

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein

8.9e-17

57.65

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Query:  KFGEWDDKGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK
        +FGE DD   P     +W +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   S S     +    P  P PK
Subjt:  KFGEWDDKGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPK

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein

1.4e-14

60.56

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Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGSVAN-MVSSQSNEPA-YNNESFPQSPPPK
        ++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G+  N +VS Q N+ +  NN    Q+P  K
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGSVAN-MVSSQSNEPA-YNNESFPQSPPPK

Sequences

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CDS sequence

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ATGCTTAGAAGGGGTGAACAGCATTGGAAGAAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGA
TCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGAGAAGAAGA
CTACTGGAAGTGTTGCCAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGGTCTGTTTATTAGAAGACTTT
GGAATCAATTTGTTCTAG

mRNA sequence

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Protein sequence

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MLRRGEQHWKKDKGRPLPKFGEWDDKGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKVCLLEDF
GINLF

CmoCh18G001860 (gene) of Cucurbita moschata (Rifu) v1 genome