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CmoCh18G002080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G002080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCitrulline--aspartate ligase
Genome locationCmo_Chr18:1373048..1374417
RNA-Seq ExpressionCmoCh18G002080
SyntenyCmoCh18G002080
Gene Ontology termsGO:0000050 - urea cycle (biological process)
GO:0000053 - argininosuccinate metabolic process (biological process)
GO:0006526 - arginine biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0004055 - argininosuccinate synthase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR014729 - Rossmann-like alpha/beta/alpha sandwich fold
IPR018223 - Argininosuccinate synthase, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573121.1 Argininosuccinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4984.85Show/hide
Query:  MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETA
        MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETA
Subjt:  MGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETA

Query:  NGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        NGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  NGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

XP_022955077.1 argininosuccinate synthase, chloroplastic-like [Cucurbita moschata]1.5e-5185.29Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

XP_022994533.1 argininosuccinate synthase, chloroplastic-like [Cucurbita maxima]1.6e-5083.09Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGNGIASNRAGVLRSNK SVIQAILQSESE
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ETANGRGT+GLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

XP_023519539.1 argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-4172.06Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MA+LMGGSLFS+A G F PSK ESVA+YCRISGP KLH FQE                    LGAKASE+HGN IA NRA VLRSNKKSVIQAILQSE E
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ET NG  TRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

XP_023542652.1 argininosuccinate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-4982.35Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MARL GGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGN IASNRAGVLRSNKK VIQAILQSESE
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

TrEMBL top hitse value%identityAlignment
A0A0A0LWM9 Citrulline--aspartate ligase1.2e-3868.38Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MA+LMGGSLFSSA   F PSKTE+VA+YCRIS   KLH FQE                    LGAK  E+HGNG++SN AGVLRSNKK VIQAILQSE E
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ET NG GT GLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

A0A6J1E7A9 Citrulline--aspartate ligase4.3e-4171.32Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MA+LMGG LFS+A G F PSK ESVA+YCRISGP KLH FQE                    LGAKASE+HGN IA NRA VLRSNKKSVIQAILQSE E
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ET NG  TRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

A0A6J1GSL4 Citrulline--aspartate ligase7.1e-5285.29Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

A0A6J1K5F5 Citrulline--aspartate ligase7.8e-5183.09Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQE                    LGAKASELHGNGIASNRAGVLRSNK SVIQAILQSESE
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ETANGRGT+GLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

A0A6J1KF74 Citrulline--aspartate ligase3.1e-3969.85Show/hide
Query:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE
        MA+LMGGSLFS+A G F PSK ESVA+YCRISG  KLH FQE                    LGAKASE+HGN IA N A VLRSNKKSVIQAIL SE E
Subjt:  MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESE

Query:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +ET NG  TRGLRGQLNKVVLAYSGGLDTSVIVPWL
Subjt:  VETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

SwissProt top hitse value%identityAlignment
A4XKG4 Argininosuccinate synthase1.4e-0495.45Show/hide
Query:  QLNKVVLAYSGGLDTSVIVPWL
        QLNKVVLAYSGGLDTSVI+PWL
Subjt:  QLNKVVLAYSGGLDTSVIVPWL

B2TQ23 Argininosuccinate synthase6.9e-0481.82Show/hide
Query:  QLNKVVLAYSGGLDTSVIVPWL
        +LNKV+LAYSGGLDTS+I+PWL
Subjt:  QLNKVVLAYSGGLDTSVIVPWL

B2UYI0 Argininosuccinate synthase6.9e-0481.82Show/hide
Query:  QLNKVVLAYSGGLDTSVIVPWL
        +LNKV+LAYSGGLDTS+I+PWL
Subjt:  QLNKVVLAYSGGLDTSVIVPWL

B9MRP5 Argininosuccinate synthase4.1e-0490.91Show/hide
Query:  QLNKVVLAYSGGLDTSVIVPWL
        +LNKVVLAYSGGLDTSVI+PWL
Subjt:  QLNKVVLAYSGGLDTSVIVPWL

Q9SZX3 Argininosuccinate synthase, chloroplastic7.6e-1147.44Show/hide
Query:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L KVVLAYSGGLDTSVIVPWL
Subjt:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

Arabidopsis top hitse value%identityAlignment
AT4G24830.1 arginosuccinate synthase family5.4e-1247.44Show/hide
Query:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L KVVLAYSGGLDTSVIVPWL
Subjt:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL

AT4G24830.2 arginosuccinate synthase family5.4e-1247.44Show/hide
Query:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL
        +++ L  K S+L GN + +      RS K   I+A+L  +    T + +   GLRG+L KVVLAYSGGLDTSVIVPWL
Subjt:  RYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTRGLRGQLNKVVLAYSGGLDTSVIVPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGTTAATGGGAGGCTCTCTGTTCTCATCGGCTACTGGTGCTTTTCAGCCATCCAAAACAGAGTCAGTGGCGAATTATTGCAGAATATCTGGCCCGGTGAAGTT
GCATTTATTCCAAGAGGTATTTGAATCAATGATGCTTTCCCTTCTGTTATTCAATGAATTTGATCGATATCGGCCTCTGGGTGCAAAAGCGTCTGAACTTCATGGCAATG
GCATAGCTAGTAACAGGGCTGGTGTTCTGCGGTCGAATAAGAAAAGCGTTATACAGGCAATATTGCAGAGTGAGAGTGAGGTCGAAACTGCCAATGGTAGAGGGACTAGA
GGTCTGCGAGGGCAGTTGAATAAGGTTGTTTTGGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTTCCCTGGCTGAGCCATGGACTTCTAAACTTATCAAATACTCA
TTCAGCAAGTGGCAGTAGTCGCATGATTGAAGAACTGAGAGATAGCTGA
mRNA sequenceShow/hide mRNA sequence
GATTAACCGTAACATTAATAGCGATTTCCTCGTTCATTAAGTCGTCAGTATTACGCGGCAATATAAAGATGGCCGTCGGCCGTTCAATATTTTAAACCCTAGCGTCTTAG
CCATTTTCAGAAAGCTGGTTGTCAGAAAGCTGATTGTCAGAAGGTTGTTCTTCTCTGAGATTTGCGAAGGTCACTATCGTCGCCGCTAACATCATGGCTCGGTTAATGGG
AGGCTCTCTGTTCTCATCGGCTACTGGTGCTTTTCAGCCATCCAAAACAGAGTCAGTGGCGAATTATTGCAGAATATCTGGCCCGGTGAAGTTGCATTTATTCCAAGAGG
TATTTGAATCAATGATGCTTTCCCTTCTGTTATTCAATGAATTTGATCGATATCGGCCTCTGGGTGCAAAAGCGTCTGAACTTCATGGCAATGGCATAGCTAGTAACAGG
GCTGGTGTTCTGCGGTCGAATAAGAAAAGCGTTATACAGGCAATATTGCAGAGTGAGAGTGAGGTCGAAACTGCCAATGGTAGAGGGACTAGAGGTCTGCGAGGGCAGTT
GAATAAGGTTGTTTTGGCTTATAGTGGTGGCTTAGACACATCAGTCATTGTTCCCTGGCTGAGCCATGGACTTCTAAACTTATCAAATACTCATTCAGCAAGTGGCAGTA
GTCGCATGATTGAAGAACTGAGAGATAGCTGA
Protein sequenceShow/hide protein sequence
MARLMGGSLFSSATGAFQPSKTESVANYCRISGPVKLHLFQEVFESMMLSLLLFNEFDRYRPLGAKASELHGNGIASNRAGVLRSNKKSVIQAILQSESEVETANGRGTR
GLRGQLNKVVLAYSGGLDTSVIVPWLSHGLLNLSNTHSASGSSRMIEELRDS