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CmoCh18G002290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G002290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDUF4408 domain-containing protein
Genome locationCmo_Chr18:1504732..1505217
RNA-Seq ExpressionCmoCh18G002290
SyntenyCmoCh18G002290
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]2.5e-8096.89Show/hide
Query:  MALTNVKTRSSMISNILCFLVALFFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDGTLIVGGDENRGLKICHDDD
        MALTN+KTRSSMI+NILCFLVALFFILL  LPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSD FADNLCFYDGTLIVGGDENRGLKICHDDD
Subjt:  MALTNVKTRSSMISNILCFLVALFFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDGTLIVGGDENRGLKICHDDD

Query:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-8096.89Show/hide
Query:  MALTNVKTRSSMISNILCFLVALFFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDGTLIVGGDENRGLKICHDDD
        MALTN+KTRSSMI+NILCFLVALFFILL  LPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSD FADNLCFYDGTLIVGGDENRGLKICHDDD
Subjt:  MALTNVKTRSSMISNILCFLVALFFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDGTLIVGGDENRGLKICHDDD

Query:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
        EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG
Subjt:  EWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG

KGN64433.2 hypothetical protein Csa_013667 [Cucumis sativus]2.5e-2753.25Show/hide
Query:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG
        M LT ++T SS  SN             + CFL A    LLWILP       SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG
Subjt:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG

Query:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA
            TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA
Subjt:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEA

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]4.4e-3249.42Show/hide
Query:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-
        K+  S ++NI      L FL ALF  LLWI+PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G 
Subjt:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-

Query:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
           T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]8.9e-3351.45Show/hide
Query:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG
        M LT ++T SS  SN             + CFL A    LLWILP       SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG
Subjt:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG

Query:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
            TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein4.3e-3351.45Show/hide
Query:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG
        M LT ++T SS  SN             + CFL A    LLWILP       SNY INFPTP  VFI+GNLIVV+LIGESKVF+S + D F  ++CFYDG
Subjt:  MALTNVKTRSSMISN-------------ILCFLVALFFILLWILPL------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG

Query:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
            TL+  GD  R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ T K +Y KK
Subjt:  ----TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A1S3BFF3 uncharacterized protein LOC1034890332.1e-3249.42Show/hide
Query:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-
        K+  S ++NI      L FL ALF  LLWI+PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G 
Subjt:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-

Query:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
           T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A5A7UM42 Protoheme IX farnesyltransferase2.1e-3249.42Show/hide
Query:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-
        K+  S ++NI      L FL ALF  LLWI+PL                   NY INFPTP  VFI+GNLIVV+LIGESK+F+S + D F  ++CFY G 
Subjt:  KTRSSMISNI------LCFLVALFFILLWILPL------------------SNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDG-

Query:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK
           T +  GD+ R  +   ++DEWE+   N E+LSKRADDFIARVNMQR+IEA ++ +CC++ TTK +YRKK
Subjt:  ---TLIVGGDENRGLKICHDDDEWEMGLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKK

A0A6J1CA01 uncharacterized protein LOC1110088103.8e-2146.43Show/hide
Query:  NVKTRSSMISNILCFLVAL-----FFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFA--DNLCFYDGTL------IVGGDENR
        N+   + + S +L FL AL     FFI  WILP    S N PT  SVF++GNLIV VL+GESK+F+ K+ D     D+ C +DG+        +  D + 
Subjt:  NVKTRSSMISNILCFLVAL-----FFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFA--DNLCFYDGTL------IVGGDENR

Query:  GLKICHDDDEWEM-GLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR
        G +I    DEWEM  L + E+LS+RADDFIARVNMQR+IEA+IL + CE  T   KYR++ + CL  R
Subjt:  GLKICHDDDEWEM-GLENCEDLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNR

V4TA27 DUF4408 domain-containing protein1.6e-0833.93Show/hide
Query:  SSMISNILCFLVALFFILL------WILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSD----CFAD--------------NLCFYDGTLIV
        +++  ++ CF    F  LL        + L    +   +P  +F +GNLI+++LIGESK FAS+SS     C+ D              + C  +     
Subjt:  SSMISNILCFLVALFFILL------WILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSD----CFAD--------------NLCFYDGTLIV

Query:  GGD--ENRGLKICHDDDEWEMGLEN------------CEDLSKRADDFIARVNMQREIEASILCFCCE
        G D  EN  ++   D++E E+G EN             E+LSKRADDFIARVN QR +EA +L  C E
Subjt:  GGD--ENRGLKICHDDDEWEMGLEN------------CEDLSKRADDFIARVNMQREIEASILCFCCE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G50610.1 unknown protein7.1e-0430.33Show/hide
Query:  FILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS-------DCFADNLCFYDGTLIVGG-----DENRGLKICHDDDEWEMGLENCEDL
        F L  I  + NY +N   P  +FI+ N+IV++LIGES++   +SS          +  L   +   +  G     +EN       +    ++     + L
Subjt:  FILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS-------DCFADNLCFYDGTLIVGG-----DENRGLKICHDDDEWEMGLENCEDL

Query:  SKRADDFIARVNMQREIEASIL
        ++RADD IARVN QR +E  +L
Subjt:  SKRADDFIARVNMQREIEASIL

AT5G50710.1 unknown protein7.1e-0430.33Show/hide
Query:  FILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS-------DCFADNLCFYDGTLIVGG-----DENRGLKICHDDDEWEMGLENCEDL
        F L  I  + NY +N   P  +FI+ N+IV++LIGES++   +SS          +  L   +   +  G     +EN       +    ++     + L
Subjt:  FILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSS-------DCFADNLCFYDGTLIVGG-----DENRGLKICHDDDEWEMGLENCEDL

Query:  SKRADDFIARVNMQREIEASIL
        ++RADD IARVN QR +E  +L
Subjt:  SKRADDFIARVNMQREIEASIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTTACAAACGTCAAAACAAGATCTTCAATGATTTCAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCATCCTCTTATGGATCCTTCCATTATCCAATTACTC
AATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATCGGAGAATCCAAAGTTTTTGCTTCAAAAAGTTCGGATTGTTTTGCTG
ATAATCTCTGTTTTTATGATGGAACTTTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGATGATGAATGGGAGATGGGTTTGGAGAATTGTGAG
GATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTTTTGTTGTGAATTGAAGACGACGAAGAACAAATA
TAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTTACAAACGTCAAAACAAGATCTTCAATGATTTCAAACATCCTCTGTTTTCTTGTTGCTCTGTTTTTCATCCTCTTATGGATCCTTCCATTATCCAATTACTC
AATAAATTTCCCAACACCCATTTCCGTTTTCATCATCGGCAATCTGATCGTTGTCGTTCTCATCGGAGAATCCAAAGTTTTTGCTTCAAAAAGTTCGGATTGTTTTGCTG
ATAATCTCTGTTTTTATGATGGAACTTTGATTGTCGGAGGAGATGAAAACAGGGGTTTGAAGATTTGTCATGATGATGATGAATGGGAGATGGGTTTGGAGAATTGTGAG
GATTTGAGTAAAAGAGCCGATGATTTCATTGCTAGAGTGAATATGCAGAGAGAAATTGAAGCTTCGATACTCTGTTTTTGTTGTGAATTGAAGACGACGAAGAACAAATA
TAGAAAGAAAGCTTTGAAATGTTTGACGAATCGTGTCAATGGCTGA
Protein sequenceShow/hide protein sequence
MALTNVKTRSSMISNILCFLVALFFILLWILPLSNYSINFPTPISVFIIGNLIVVVLIGESKVFASKSSDCFADNLCFYDGTLIVGGDENRGLKICHDDDEWEMGLENCE
DLSKRADDFIARVNMQREIEASILCFCCELKTTKNKYRKKALKCLTNRVNG