; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G002390 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G002390
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncentromere protein S isoform X2
Genome locationCmo_Chr18:1583974..1585869
RNA-Seq ExpressionCmoCh18G002390
SyntenyCmoCh18G002390
Gene Ontology termsGO:0000712 - resolution of meiotic recombination intermediates (biological process)
GO:0006312 - mitotic recombination (biological process)
GO:0007129 - synapsis (biological process)
GO:0031297 - replication fork processing (biological process)
GO:0036297 - interstrand cross-link repair (biological process)
GO:0043240 - Fanconi anaemia nuclear complex (cellular component)
GO:0071821 - FANCM-MHF complex (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR009072 - Histone-fold
IPR029003 - CENP-S/Mhf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573152.1 Protein MHF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5998.43Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILS HRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

KAG7012337.1 Protein MHF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.3e-5998.43Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAI IAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

XP_004154006.1 protein MHF1 homolog isoform X2 [Cucumis sativus]2.6e-4882.17Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDS +ELLR RFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKYTKQLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKE--DKSAIHITDA
        TKEPQSERKRKKAPKK+  D+ A+HI DA
Subjt:  TKEPQSERKRKKAPKKE--DKSAIHITDA

XP_022955266.1 protein MHF1 homolog [Cucurbita moschata]1.4e-60100Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

XP_022994496.1 protein MHF1 homolog [Cucurbita maxima]8.8e-6099.21Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

TrEMBL top hitse value%identityAlignment
A0A0A0LR97 Uncharacterized protein1.3e-4882.17Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDS +ELLR RFRLS+ISIAEAEA +SGMEIS PVMTCVA+LAFKYTKQLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKE--DKSAIHITDA
        TKEPQSERKRKKAPKK+  D+ A+HI DA
Subjt:  TKEPQSERKRKKAPKKE--DKSAIHITDA

A0A5D3BHQ8 Centromere protein S isoform X24.6e-4679.07Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        MET MEEDDS +ELLR RFRLS ISIAEAEA +SGMEIS PVMTCVA+LAFK+TKQLAKDLELFA H GRKSVNTEDVIL+AHRNEHLAA L+S C++LK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKE--DKSAIHITDA
         KEPQSERKRKKAPKK+  D+ A+HI +A
Subjt:  TKEPQSERKRKKAPKKE--DKSAIHITDA

A0A6J1C623 protein MHF1 homolog4.6e-4680.77Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKY-TKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHEL
        METG EEDD+  ELL  RFRLS ISIAEAEAKR+GMEIS PVMTCVAELAFKY T+QLAKDLELFA H GRKSVNTEDVILSAHRNEHLAASL+SFC++L
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKY-TKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHEL

Query:  KTKEPQSERKRKKAPKKE--DKSAIHITDA
        KTKEPQ+ERKRKKA KKE  D+  +HI DA
Subjt:  KTKEPQSERKRKKAPKKE--DKSAIHITDA

A0A6J1GTB4 protein MHF1 homolog6.5e-61100Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

A0A6J1JZB0 protein MHF1 homolog4.2e-6099.21Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        METGMEEDDSTAELLR RFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKKAPKKEDKSAIHITDA
        TKEPQSERKRKKAPKKEDKSAIHITDA
Subjt:  TKEPQSERKRKKAPKKEDKSAIHITDA

SwissProt top hitse value%identityAlignment
E1BSW7 Centromere protein S2.2e-0526.61Show/hide
Query:  GMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKE
        G E+ +   + LR     +   + +  A+  G+  S   +  ++E+ F+  +  A+DLE+FA H  R ++ +EDV L A R+  L   ++    EL +  
Subjt:  GMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKE

Query:  PQSERKRKK
         + + K+KK
Subjt:  PQSERKRKK

Q2TBR7 Centromere protein S7.6e-0628.24Show/hide
Query:  MEEDDSTAELLRGRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFC
        MEE++ + E  R  +  RL A        + E  A    M+ S   +  ++E+ F   +  AKDLE+FA H  R ++NTEDV L A R+  L   ++   
Subjt:  MEEDDSTAELLRGRF--RLSAI------SIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFC

Query:  HELKTKEPQSERKRKKAPKKEDKSAIHITDA
         ++     + + K+KK  + E+++++   +A
Subjt:  HELKTKEPQSERKRKKAPKKEDKSAIHITDA

Q6NRI8 Centromere protein S4.0e-0729.46Show/hide
Query:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK
        M  G EE  S  + L+        S+ +  A    ++ S   +  ++E+ F+  +  AKDLE+FA H  R ++N +DV L A R+  L A +S    E+ 
Subjt:  METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELK

Query:  TKEPQSERKRKK
            + + K+KK
Subjt:  TKEPQSERKRKK

Q8N2Z9 Centromere protein S3.4e-0631.93Show/hide
Query:  ETGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKT
        ET  ++  S  + L+     +   + E  A    M+ S   +  ++EL F+  +  AKDLE+FA H  R ++NTEDV L A R+  L   ++    E+  
Subjt:  ETGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKT

Query:  KEPQSERKRKKAPKKEDKS
         +   ERK +K  K ED S
Subjt:  KEPQSERKRKKAPKKEDKS

Q9FI55 Protein MHF1 homolog1.1e-3670.69Show/hide
Query:  EDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQS
        E+ S  +L+R RFRLSAISIAEAEAK++GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK VN +DV+LSAHRN++LAASL S C+ELK KEPQS
Subjt:  EDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQS

Query:  ERKRKK-APKKEDKSA
        ERKRKK + KKEDK++
Subjt:  ERKRKK-APKKEDKSA

Arabidopsis top hitse value%identityAlignment
AT5G50930.1 Histone superfamily protein7.7e-3870.69Show/hide
Query:  EDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQS
        E+ S  +L+R RFRLSAISIAEAEAK++GMEI  PV+ CVA+LAFKY + +AKDLELFAHH GRK VN +DV+LSAHRN++LAASL S C+ELK KEPQS
Subjt:  EDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQS

Query:  ERKRKK-APKKEDKSA
        ERKRKK + KKEDK++
Subjt:  ERKRKK-APKKEDKSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGGCCGATTCCGACTGTCCGCCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGA
AATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAAACAGTTGGCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGA
ATACGGAAGACGTCATACTCTCAGCTCATAGAAACGAGCATCTGGCTGCCTCATTGTCGTCCTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGG
AAAAAGGCACCGAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAA
mRNA sequenceShow/hide mRNA sequence
GAACAGGTGCAGCGAAATGGAGTGAACTCTGTGTCCAGAAGGCTCTGCAATGGAGACTGGGATGGAAGAAGACGACTCCACGGCCGAACTCTTGAGGGGCCGATTCCGAC
TGTCCGCCATTTCTATCGCTGAAGCTGAAGCGAAGAGAAGCGGGATGGAAATCTCTGTACCGGTGATGACTTGTGTCGCTGAGTTAGCGTTCAAATATACAAAACAGTTG
GCAAAGGACCTTGAGTTATTTGCTCATCATGGTGGTCGGAAATCTGTGAATACGGAAGACGTCATACTCTCAGCTCATAGAAACGAGCATCTGGCTGCCTCATTGTCGTC
CTTCTGCCATGAACTAAAGACAAAAGAACCTCAAAGTGAGAGAAAGCGGAAAAAGGCACCGAAAAAGGAAGATAAAAGTGCAATACATATTACTGACGCATAA
Protein sequenceShow/hide protein sequence
METGMEEDDSTAELLRGRFRLSAISIAEAEAKRSGMEISVPVMTCVAELAFKYTKQLAKDLELFAHHGGRKSVNTEDVILSAHRNEHLAASLSSFCHELKTKEPQSERKR
KKAPKKEDKSAIHITDA