CuGenDBv2

Gene ID	CmoCh18G002400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	chromophore lyase CRL, chloroplastic
Genome location	Cmo_Chr18:1586990..1592025
RNA-Seq Expression	CmoCh18G002400
Synteny	CmoCh18G002400
Gene Ontology terms	GO:0000302 - response to reactive oxygen species (biological process) GO:0010020 - chloroplast fission (biological process) GO:0017009 - protein-phycocyanobilin linkage (biological process) GO:0046741 - transport of virus in host, tissue to tissue (biological process) GO:0051302 - regulation of cell division (biological process) GO:0098586 - cellular response to virus (biological process) GO:0009707 - chloroplast outer membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016829 - lyase activity (molecular function)
InterPro domains	IPR010404 - Chromophore lyase CpcT/CpeT IPR038672 - Chromophore lyase CpcT/CpeT superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7012338.1 Chromophore lyase CRL, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.1e-150

99.23

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRC YEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

XP_022954683.1 chromophore lyase CRL, chloroplastic-like isoform X1 [Cucurbita moschata]

6.0e-149

98.12

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG     DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG

Query:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

XP_022954685.1 chromophore lyase CRL, chloroplastic-like isoform X2 [Cucurbita moschata]

8.3e-151

100

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

XP_022994448.1 chromophore lyase CRL, chloroplastic [Cucurbita maxima]

7.8e-149

98.47

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQ WGTKGPYEFKPAPASSLKDM SPLNLSQL+MEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

XP_023542740.1 chromophore lyase CRL, chloroplastic-like [Cucurbita pepo subsp. pepo]

1.4e-150

99.62

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B0Z6 chromophore lyase CRL, chloroplastic

1.6e-136

92.72

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MG +SN   D NNSVGWNRAGGLIMKTLVLVGGAL LKRLTKSTTRWDHAR VSQSLSGEKFSKEQAARDP+NYFNIRM TCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVK CSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLK CDRGKRCLYEGSTPPGGFPNSWNGA+YCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLNLSQLSMEKRI
        SEIAILKNNEVHTWERGYDEDGNQ WGTK GPYEFKP PASSLKDMFSPLN SQ SMEKRI
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLNLSQLSMEKRI

A0A6J1C7M9 chromophore lyase CRL, chloroplastic

1.6e-139

92.75

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MG +SNS++D N+SVGWNRAGGLIMKTLVLVGGAL LKRLTKSTTRWDHAR VSQSLSGEKFSKEQA+RDP+NYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVK CSKEMKCDVELSSYAIR+MEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLK CDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYD+DGNQ WGTK GPYEFKP PASSLKDMFSPLN SQLSMEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

A0A6J1GRS8 chromophore lyase CRL, chloroplastic-like isoform X1

2.9e-149

98.12

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG     DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVG-----DIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNG

Query:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  AAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

A0A6J1GT34 chromophore lyase CRL, chloroplastic-like isoform X2

4.0e-151

100

Show/hide

Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

A0A6J1K575 chromophore lyase CRL, chloroplastic

3.8e-149

98.47

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAE+VDGSTVLYFEQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
        SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE
        SEIAILKNNEVHTWERGYDEDGNQ WGTKGPYEFKPAPASSLKDM SPLNLSQL+MEKRIE
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIE

SwissProt top hits

e value

%identity

Alignment

Q7NNH3 Chromophore lyase CpcT/CpeT 1

3.5e-11

30.6

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Query:  LSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYF--EQAFSRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPL-P
        L+G   + +QA  D     ++RMTTC      D S  +Y   EQ  S     P+RQR   +++ +      VE + +   E +     C +   +R + P
Subjt:  LSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYF--EQAFSRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPL-P

Query:  EEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFK
          + GD      T  ++    G +  Y G+TP GG  ++  GAA  T+EI + K   + T +RG+D  GNQ WG K  PY F+
Subjt:  EEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFK

Q9FI46 Chromophore lyase CRL, chloroplastic

3.9e-111

72.24

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Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MG +S  SD  ++S GW+RA GL++KTLVL+GGAL +KRLTKSTTR DHAR VS+SL+GEKF++EQA+RDP+NYFNIRM +CPAAE+VDGS VLY EQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
         RTPQKPFRQR Y VK C KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE++GDI EHLTT+HL CCDRGKRCLYEGST PGGFPNSWNGA+YCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLN-LSQLSMEKRIE
        S++A+LKNNE+H W+RG+DE+ NQ WG K GPYEFKPA +SS+ +  S LN L Q S++K I+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLN-LSQLSMEKRIE

Arabidopsis top hits

e value

%identity

Alignment

AT5G51020.1 crumpled leaf

2.8e-112

72.24

Show/hide

Query:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF
        MG +S  SD  ++S GW+RA GL++KTLVL+GGAL +KRLTKSTTR DHAR VS+SL+GEKF++EQA+RDP+NYFNIRM +CPAAE+VDGS VLY EQAF
Subjt:  MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAF

Query:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT
         RTPQKPFRQR Y VK C KE+KCDVE+SSYAIR+ EEYKNFCDR KDQRPLPEE++GDI EHLTT+HL CCDRGKRCLYEGST PGGFPNSWNGA+YCT
Subjt:  SRTPQKPFRQRFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCT

Query:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLN-LSQLSMEKRIE
        S++A+LKNNE+H W+RG+DE+ NQ WG K GPYEFKPA +SS+ +  S LN L Q S++K I+
Subjt:  SEIAILKNNEVHTWERGYDEDGNQAWGTK-GPYEFKPAPASSLKDMFSPLN-LSQLSMEKRIE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTGCCGATTCGAATTCTAGCGATGATTATAACAACTCAGTTGGATGGAACAGAGCTGGGGGTTTGATTATGAAGACTTTGGTACTGGTCGGAGGCGCCCTTTTCCT
CAAACGTCTTACTAAGTCCACGACGCGATGGGATCATGCCCGCTCCGTTTCTCAGTCTCTTTCCGGCGAGAAGTTTTCGAAGGAGCAAGCGGCTAGGGATCCTGAAAATT
ACTTCAACATCAGAATGACTACGTGCCCTGCAGCAGAATTGGTTGATGGTTCTACGGTGTTGTACTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCATTTCGCCAG
AGATTTTATACGGTGAAACTTTGTTCAAAGGAGATGAAATGTGATGTGGAGCTAAGCTCATACGCCATTCGAGAAATGGAGGAGTACAAGAATTTTTGTGATCGCACAAA
AGACCAACGTCCTCTTCCCGAAGAAATAGTTGGGGACATTGCGGAGCATTTAACTACGCTACATCTCAAGTGTTGTGACCGTGGAAAACGTTGCCTCTACGAAGGTTCAA
CTCCACCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCAGAAATTGCTATCCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTATGACGAA
GATGGAAACCAGGCTTGGGGAACAAAAGGACCTTACGAATTCAAGCCAGCCCCAGCCTCCAGTCTCAAGGACATGTTTTCTCCATTAAATCTCTCTCAGCTGTCCATGGA
GAAAAGAATAGAGGTCAAAAGAGCCGGTCGAATTCTTGAAAGCAAGCAAAATGGCTCTCCAGGCATCCAATCCTTTTACTCCATGAATTGA

mRNA sequence

Show/hide mRNA sequence

GGCGTTGTTGTTGGATTGAAGAAGAGATGATAAACAGAAGAGCCCGCCGTGATGTGGCGAAGTTTCACGAGACGACGCCTACATTTTTGGTTTAATGGAGAGTGGAGTCA
TGGGTTCTCTATTTCACGACGCTGATTAAACGCTCACCTCCTAATTCCTCTCTGCATCCACCACTCTTACTCTTTCAAGCTCCATTTCGTGCTTTGAATGATTTCGAAAA
CCTGTTCAAGATTCCGAATGGTGGGCGTTTGAGAGCTCTGGAAGTTATGGGTGCCGATTCGAATTCTAGCGATGATTATAACAACTCAGTTGGATGGAACAGAGCTGGGG
GTTTGATTATGAAGACTTTGGTACTGGTCGGAGGCGCCCTTTTCCTCAAACGTCTTACTAAGTCCACGACGCGATGGGATCATGCCCGCTCCGTTTCTCAGTCTCTTTCC
GGCGAGAAGTTTTCGAAGGAGCAAGCGGCTAGGGATCCTGAAAATTACTTCAACATCAGAATGACTACGTGCCCTGCAGCAGAATTGGTTGATGGTTCTACGGTGTTGTA
CTTCGAACAAGCTTTCTCCAGAACTCCTCAAAAACCATTTCGCCAGAGATTTTATACGGTGAAACTTTGTTCAAAGGAGATGAAATGTGATGTGGAGCTAAGCTCATACG
CCATTCGAGAAATGGAGGAGTACAAGAATTTTTGTGATCGCACAAAAGACCAACGTCCTCTTCCCGAAGAAATAGTTGGGGACATTGCGGAGCATTTAACTACGCTACAT
CTCAAGTGTTGTGACCGTGGAAAACGTTGCCTCTACGAAGGTTCAACTCCACCTGGTGGTTTTCCAAATTCATGGAATGGAGCAGCCTACTGTACTTCAGAAATTGCTAT
CCTAAAGAATAATGAAGTACATACCTGGGAAAGGGGTTATGACGAAGATGGAAACCAGGCTTGGGGAACAAAAGGACCTTACGAATTCAAGCCAGCCCCAGCCTCCAGTC
TCAAGGACATGTTTTCTCCATTAAATCTCTCTCAGCTGTCCATGGAGAAAAGAATAGAGGTCAAAAGAGCCGGTCGAATTCTTGAAAGCAAGCAAAATGGCTCTCCAGGC
ATCCAATCCTTTTACTCCATGAATTGA

Protein sequence

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MGADSNSSDDYNNSVGWNRAGGLIMKTLVLVGGALFLKRLTKSTTRWDHARSVSQSLSGEKFSKEQAARDPENYFNIRMTTCPAAELVDGSTVLYFEQAFSRTPQKPFRQ
RFYTVKLCSKEMKCDVELSSYAIREMEEYKNFCDRTKDQRPLPEEIVGDIAEHLTTLHLKCCDRGKRCLYEGSTPPGGFPNSWNGAAYCTSEIAILKNNEVHTWERGYDE
DGNQAWGTKGPYEFKPAPASSLKDMFSPLNLSQLSMEKRIEVKRAGRILESKQNGSPGIQSFYSMN

CmoCh18G002400 (gene) of Cucurbita moschata (Rifu) v1 genome