CuGenDBv2

Gene ID	CmoCh18G002540
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Reverse transcriptase
Genome location	Cmo_Chr18:1689521..1692265
RNA-Seq Expression	CmoCh18G002540
Synteny	CmoCh18G002540
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006413 - translational initiation (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR023780 - Chromo domain IPR016197 - Chromo-like domain superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000953 - Chromo/chromo shadow domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0032849.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

80.72

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVRK  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

80.72

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQKKKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SUK4 Reverse transcriptase

0.0e+00

80.72

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVRK  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

A0A5A7UXR6 Reverse transcriptase

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

A0A5D3BYE6 Reverse transcriptase

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

A0A5D3C4R1 Reverse transcriptase

0.0e+00

80.61

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQ+KKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

A0A5D3C9P8 Reverse transcriptase

0.0e+00

80.72

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        MAPPELAELRKQLDELL AGFIRPAKAPYGAPVLFQKKKDG+LRLCIDYRALNK+TVRNKYPLPII+DLFD+LHGAKYF+KLDLRSGYYQVRIAEGDEPK
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
        TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF+EYLD+FV+VYLDDIVVYSTT+EEH+ HL+ VF KL++NQLYVK+EKC+FAQ  INFLGHV+ CG+
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
        I M+  KI AI++W +P SVSELRSFLGLANYYRRFVEGFS+RA+PLTELLKKD  W+W  +CQ AF+ LK  +  GP+LG+ DVTKPFEVETDASD+AL
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA
        GGVL+Q GH IAYESRKLN AERRYTVSEKEMLAVVHCLR WRQYLLGS FVVKTDNSATCHFF QPKLT+KQA WQE LAEFDF+FEHK G SNQAADA
Subjt:  GGVLIQEGHSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADA

Query:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA
        LSRK EHAA+C+LAH+  S+I GS+RD ++E L KD +A+ V+ LAKAGKTRQFWVE DLL+TKGNRLYVPR G LRKKL+ ECHDTLWAGHPGWQRTYA
Subjt:  LSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYA

Query:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK
        L+KKGYFWPNMRDD+MQYTKTCLICQQDKVEK KV+GLL+PLPVPTRPWESVS+DFITHLPKVG+++AILVI+DRFSKYATFIP  K CSAE TAQLFFK
Subjt:  LIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFK

Query:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS
        HVVKLWG+PTSI+SDRDGRFIG+FW+ELF+FLGT+LNISSSYHPQTDGQTERFN +LEEYLRHFV+ARQKNW+QLLDVAQFCFN QTSSSTG+S FEIVS
Subjt:  HVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVS

Query:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA
        GRQP LPH++DHP+AGKNPQA NFT+EW++T +IARAYLEKASK MKKWADKKRRPL+FRAGDQ+LIKLRPEQ+RFR RK+QRLVRKYEGPVEVLKK+G 
Subjt:  GRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLRPEQIRFRSRKNQRLVRKYEGPVEVLKKIGA

Query:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI
        TSYRVALP WMKI+ VIHVSNLKPYH D +D +RN  TRP IDL QKE K+VEEILA+RVR+  RP R I E+LVKWKNLP+EETSWER EDL +    I
Subjt:  TSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNLPIEETSWERAEDLNSAATHI

Query:  ARYENSRLTWTST
          ++  +LT TST
Subjt:  ARYENSRLTWTST

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

6.2e-134

33.22

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPLP+I  L  ++ G+  FTKLDL+S Y+ +R+ +GDE K
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
               G FE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +    
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
         +   + I  + +WK P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W W+     A EN+K  +   PVL   D +K   +ETDASD A+
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA
        G VL Q+      + + Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+         +      + A WQ  L +F+F+  ++ 
Subjt:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA

Query:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK
        G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K                 ++  LLI   +++ +P   +L + 
Subjt:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK

Query:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY
        +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK 
Subjt:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY

Query:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA
        A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + 
Subjt:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA

Query:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS
        Q  +N    S+T  + FEIV    PAL  +    ++ K  +    ++E  +     + +L   +  MKK+ D K + + +F+ GD +++K        +S
Subjt:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS

Query:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY
         K   L   + GP  VL+K G  +Y + LP  +K    S  HVS+L+ Y
Subjt:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY

P0CT35 Transposon Tf2-2 polyprotein

6.2e-134

33.22

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPLP+I  L  ++ G+  FTKLDL+S Y+ +R+ +GDE K
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
               G FE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +    
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
         +   + I  + +WK P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W W+     A EN+K  +   PVL   D +K   +ETDASD A+
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA
        G VL Q+      + + Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+         +      + A WQ  L +F+F+  ++ 
Subjt:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA

Query:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK
        G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K                 ++  LLI   +++ +P   +L + 
Subjt:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK

Query:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY
        +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK 
Subjt:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY

Query:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA
        A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + 
Subjt:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA

Query:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS
        Q  +N    S+T  + FEIV    PAL  +    ++ K  +    ++E  +     + +L   +  MKK+ D K + + +F+ GD +++K        +S
Subjt:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS

Query:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY
         K   L   + GP  VL+K G  +Y + LP  +K    S  HVS+L+ Y
Subjt:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY

P0CT36 Transposon Tf2-3 polyprotein

6.2e-134

33.22

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPLP+I  L  ++ G+  FTKLDL+S Y+ +R+ +GDE K
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
               G FE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +    
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
         +   + I  + +WK P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W W+     A EN+K  +   PVL   D +K   +ETDASD A+
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA
        G VL Q+      + + Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+         +      + A WQ  L +F+F+  ++ 
Subjt:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA

Query:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK
        G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K                 ++  LLI   +++ +P   +L + 
Subjt:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK

Query:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY
        +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK 
Subjt:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY

Query:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA
        A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + 
Subjt:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA

Query:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS
        Q  +N    S+T  + FEIV    PAL  +    ++ K  +    ++E  +     + +L   +  MKK+ D K + + +F+ GD +++K        +S
Subjt:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS

Query:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY
         K   L   + GP  VL+K G  +Y + LP  +K    S  HVS+L+ Y
Subjt:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY

P0CT37 Transposon Tf2-4 polyprotein

6.2e-134

33.22

Show/hide

Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPLP+I  L  ++ G+  FTKLDL+S Y+ +R+ +GDE K
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
               G FE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +    
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
         +   + I  + +WK P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W W+     A EN+K  +   PVL   D +K   +ETDASD A+
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA
        G VL Q+      + + Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+         +      + A WQ  L +F+F+  ++ 
Subjt:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA

Query:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK
        G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K                 ++  LLI   +++ +P   +L + 
Subjt:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK

Query:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY
        +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK 
Subjt:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY

Query:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA
        A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + 
Subjt:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA

Query:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS
        Q  +N    S+T  + FEIV    PAL  +    ++ K  +    ++E  +     + +L   +  MKK+ D K + + +F+ GD +++K        +S
Subjt:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS

Query:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY
         K   L   + GP  VL+K G  +Y + LP  +K    S  HVS+L+ Y
Subjt:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY

P0CT41 Transposon Tf2-12 polyprotein

6.2e-134

33.22

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Query:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK
        + P ++  +  ++++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPLP+I  L  ++ G+  FTKLDL+S Y+ +R+ +GDE K
Subjt:  MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPK

Query:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ
               G FE+LVMP+G++ APA F   +N +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+G+ +    
Subjt:  TTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQ

Query:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL
         +   + I  + +WK P +  ELR FLG  NY R+F+   S+   PL  LLKKD  W W+     A EN+K  +   PVL   D +K   +ETDASD A+
Subjt:  ISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFAL

Query:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA
        G VL Q+      + + Y S K++ A+  Y+VS+KEMLA++  L+ WR YL  +   F + TD+         +      + A WQ  L +F+F+  ++ 
Subjt:  GGVLIQEG-----HSIAYESRKLNDAERRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDNSATCHFF--DQPKLTAKQAWWQELLAEFDFKFEHKA

Query:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK
        G +N  ADALSR  +         I     D S+  + +  +  D   + V E     K                 ++  LLI   +++ +P   +L + 
Subjt:  GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKAVVELAKAGK------------TRQFWVEGDLLITKGNRLYVPRTGELRKK

Query:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY
        +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K    K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK 
Subjt:  LIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGEYDAILVIVDRFSKY

Query:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA
        A  +P  K  +AE TA++F + V+  +G P  II+D D  F    W +        +  S  Y PQTDGQTER N  +E+ LR         W+  + + 
Subjt:  ATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVA

Query:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS
        Q  +N    S+T  + FEIV    PAL  +    ++ K  +    ++E  +     + +L   +  MKK+ D K + + +F+ GD +++K        +S
Subjt:  QFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPL-QFRAGDQILIKLRPEQIRFRS

Query:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY
         K   L   + GP  VL+K G  +Y + LP  +K    S  HVS+L+ Y
Subjt:  RKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMK--IHSVIHVSNLKPY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

1.7e-22

42.31

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Query:  HLKLVFDKLRQNQLYVKKEKCAFAQTCINFLG--HVVRCGQISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSW
        HL +V     Q+Q Y  ++KCAF Q  I +LG  H++    +S D  K++A+  W  P + +ELR FLGL  YYRRFV+ + +   PLTELLKK +   W
Subjt:  HLKLVFDKLRQNQLYVKKEKCAFAQTCINFLG--HVVRCGQISMDSDKIKAIQEWKVPTSVSELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSW

Query:  SNDCQMAFENLKTTMTRGPVLGLVDVTKPF
        +    +AF+ LK  +T  PVL L D+  PF
Subjt:  SNDCQMAFENLKTTMTRGPVLGLVDVTKPF

Sequences

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CDS sequence

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ATGGCTCCGCCCGAGCTAGCCGAATTGAGAAAACAATTGGACGAGTTGCTGAAGGCGGGATTCATTCGCCCGGCAAAGGCACCTTATGGAGCCCCCGTACTATTCCAGAA
GAAGAAGGATGGGACGTTGCGTCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACAGTACGCAACAAATATCCTCTGCCAATAATATCCGACTTGTTTGACCAACTTC
ACGGGGCCAAGTACTTCACGAAGTTGGACTTACGATCAGGATATTATCAAGTACGTATTGCCGAAGGGGACGAACCCAAGACGACGTGTGTAACAAGATATGGGGCCTTT
GAATTCCTAGTAATGCCCTTTGGCTTGACAAATGCCCCAGCTACGTTCTGCACGTTGATGAACCAGGTTTTCTACGAATACCTGGATCAATTCGTCATAGTGTACCTCGA
CGACATCGTTGTTTACAGCACAACCCTCGAGGAACACAAAGTGCACTTGAAGCTAGTGTTTGACAAGCTCCGGCAGAACCAGCTGTATGTGAAGAAGGAGAAATGTGCAT
TCGCACAAACATGCATCAATTTCCTTGGACATGTCGTCAGATGTGGACAAATTAGTATGGATAGCGACAAGATAAAAGCTATCCAAGAATGGAAAGTTCCCACTTCCGTA
TCTGAATTGCGGTCCTTCTTAGGACTAGCCAACTATTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCCGCCCCATTGACAGAGCTGTTGAAGAAAGACCACCCTTG
GTCGTGGTCGAATGATTGTCAAATGGCCTTTGAAAATCTGAAAACAACCATGACGAGGGGTCCTGTCCTCGGGTTGGTAGATGTCACAAAGCCATTTGAAGTAGAAACCG
ATGCTTCCGACTTTGCTCTAGGTGGAGTCCTTATTCAAGAAGGTCACTCCATCGCTTACGAAAGTCGAAAACTCAACGATGCCGAACGAAGATACACTGTCTCCGAGAAA
GAAATGCTGGCTGTAGTCCACTGCCTTCGAGTCTGGAGACAGTATCTCTTAGGATCACAGTTCGTAGTGAAGACGGATAACAGTGCCACTTGCCACTTCTTTGATCAACC
AAAATTAACAGCAAAACAAGCCTGGTGGCAGGAGTTGTTGGCCGAATTCGACTTCAAGTTCGAACACAAAGCAGGAAAGAGTAATCAAGCAGCCGACGCGCTGAGTCGGA
AGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAGCATTTACACAAAGACCCATCAGCCAAA
GCTGTCGTCGAACTAGCTAAGGCTGGAAAAACACGACAGTTTTGGGTTGAGGGGGACCTCCTGATAACCAAAGGAAACAGACTGTACGTCCCAAGAACGGGGGAACTGAG
GAAAAAGCTCATTCAGGAATGTCATGACACCTTATGGGCCGGACACCCTGGGTGGCAAAGAACATACGCCCTAATAAAGAAGGGGTACTTCTGGCCAAACATGCGAGACG
ACATCATGCAATACACCAAGACGTGCCTCATCTGCCAACAGGACAAGGTCGAGAAAGCCAAGGTCTCTGGACTCTTGGAACCTCTACCTGTGCCAACAAGACCCTGGGAA
AGTGTATCTCTGGACTTCATAACACACCTCCCAAAGGTCGGGGAATATGACGCCATCTTGGTTATTGTAGACCGGTTCTCAAAATATGCGACATTCATCCCCACTCCCAA
ATTATGCTCGGCAGAACTCACAGCCCAACTGTTTTTCAAACACGTTGTAAAGCTATGGGGCATTCCGACGAGCATCATCAGTGATAGGGATGGCAGATTCATTGGGACAT
TCTGGAGTGAGTTATTCGCGTTCTTGGGAACAACCTTAAACATCTCCTCGAGTTATCACCCTCAAACCGATGGACAGACAGAACGGTTCAATTGCCTGCTCGAAGAATAC
CTACGTCACTTCGTCGACGCTCGCCAAAAGAACTGGATACAATTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACAAGTTCGTCTACAGGGAAGAGTCTCTTCGA
AATTGTAAGTGGACGACAACCGGCCTTACCCCATATTATTGATCATCCTTATGCAGGAAAAAACCCTCAAGCTCACAACTTTACAAGAGAATGGAAGCGGACGACAAATA
TAGCCCGGGCGTATTTAGAGAAGGCTTCCAAGCATATGAAGAAATGGGCGGACAAGAAGCGTCGCCCCCTTCAATTCCGAGCAGGAGATCAGATCCTTATCAAGCTGAGA
CCAGAACAGATCAGATTTCGTAGCCGAAAGAACCAGAGACTAGTTCGTAAATATGAAGGCCCGGTTGAAGTCCTTAAAAAGATCGGGGCTACCTCCTACCGAGTTGCACT
ACCCGCATGGATGAAAATCCACTCCGTCATTCATGTGAGCAACTTGAAGCCCTATCACCCTGATCCAGACGACGACCGACGAAATGCAACCACAAGACCGAACATCGATC
TGAAGCAAAAAGAAACAAAGGAAGTGGAAGAGATCCTAGCCGACAGGGTTAGGAAGATAGGAAGACCTGTACGGACGATTCGTGAATTCCTTGTCAAATGGAAGAATCTC
CCTATAGAGGAAACAAGTTGGGAACGCGCCGAAGATCTGAACTCCGCCGCCACCCACATCGCAAGGTATGAAAATAGTCGGTTGACATGGACGTCAACCAATTAG

mRNA sequence

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Protein sequence

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MAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLPIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAF
EFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVRCGQISMDSDKIKAIQEWKVPTSV
SELRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHPWSWSNDCQMAFENLKTTMTRGPVLGLVDVTKPFEVETDASDFALGGVLIQEGHSIAYESRKLNDAERRYTVSEK
EMLAVVHCLRVWRQYLLGSQFVVKTDNSATCHFFDQPKLTAKQAWWQELLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAK
AVVELAKAGKTRQFWVEGDLLITKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWE
SVSLDFITHLPKVGEYDAILVIVDRFSKYATFIPTPKLCSAELTAQLFFKHVVKLWGIPTSIISDRDGRFIGTFWSELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEY
LRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSLFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKRTTNIARAYLEKASKHMKKWADKKRRPLQFRAGDQILIKLR
PEQIRFRSRKNQRLVRKYEGPVEVLKKIGATSYRVALPAWMKIHSVIHVSNLKPYHPDPDDDRRNATTRPNIDLKQKETKEVEEILADRVRKIGRPVRTIREFLVKWKNL
PIEETSWERAEDLNSAATHIARYENSRLTWTSTN

CmoCh18G002540 (gene) of Cucurbita moschata (Rifu) v1 genome