; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G002940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G002940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:1917029..1918170
RNA-Seq ExpressionCmoCh18G002940
SyntenyCmoCh18G002940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012383.1 hypothetical protein SDJN02_25135, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-58100Show/hide
Query:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
        SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI
Subjt:  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCI

Query:  GSMVLICFTLAIGKPTAGELGFH
        GSMVLICFTLAIGKPTAGELGFH
Subjt:  GSMVLICFTLAIGKPTAGELGFH

XP_022955079.1 uncharacterized protein LOC111457151 isoform X1 [Cucurbita moschata]3.9e-63100Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKPTAGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

XP_022955080.1 uncharacterized protein LOC111457151 isoform X2 [Cucurbita moschata]1.4e-6098.47Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKL  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKPTAGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

XP_022994139.1 uncharacterized protein LOC111489966 isoform X1 [Cucurbita maxima]6.7e-5590.84Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKLLQSNLSRK SQRGGDMMIATSSAPMAEK A  T AEVAL VGSAKDHLG+QQFHHQITITT +TAA DE ALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKP AGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

XP_023542793.1 uncharacterized protein LOC111802598 isoform X1 [Cucurbita pepo subsp. pepo]5.5e-5793.13Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MEN KLLQSNLSRK SQRGGDMMIATSSAPMAEKSA   AAEVALVVGSAKDHLGVQQFHHQITITT  TAA DEHALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKPTAGEL FH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

TrEMBL top hitse value%identityAlignment
A0A6J1GU64 uncharacterized protein LOC111457151 isoform X26.8e-6198.47Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKL  SNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKPTAGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

A0A6J1GUX4 uncharacterized protein LOC111457151 isoform X11.9e-63100Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKPTAGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

A0A6J1K0E9 uncharacterized protein LOC111489966 isoform X28.8e-5389.31Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKL  SNLSRK SQRGGDMMIATSSAPMAEK A  T AEVAL VGSAKDHLG+QQFHHQITITT +TAA DE ALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKP AGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

A0A6J1K229 uncharacterized protein LOC111489966 isoform X13.2e-5590.84Show/hide
Query:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL
        MENPKLLQSNLSRK SQRGGDMMIATSSAPMAEK A  T AEVAL VGSAKDHLG+QQFHHQITITT +TAA DE ALFRRNSFRRSSSSWFLDPKKVLL
Subjt:  MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLL

Query:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH
        FFATVSCIGSMVLICFTLAIGKP AGELGFH
Subjt:  FFATVSCIGSMVLICFTLAIGKPTAGELGFH

A0A6J1KI90 uncharacterized protein LOC111495477 isoform X12.2e-3564.08Show/hide
Query:  NPKL-LQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAA-------------EVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSS
        NP++ LQ NLSRK SQRGGD MIA+++APM   S++ T A              VA+ VGS +DHLGV Q HHQITITT+NTAA  E    RRNSFRR S
Subjt:  NPKL-LQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAA-------------EVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSS

Query:  SSWFLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGELGF
        SSWFLDPKKVLL FATVSCIGSM+LI FTLAIGKP   E GF
Subjt:  SSWFLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGELGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21215.1 unknown protein6.8e-1337.23Show/hide
Query:  QSNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSW
        +SN  RK+     G D  I+   +P+   S  E A+ V     A    +A   +      HQIT+TT+ TAA +              R++SF+RS +SW
Subjt:  QSNLSRKV--SQRGGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFRRNSFRRSSSSW

Query:  FLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL
         LDPKK++LFFAT+S +GS++LI FTL+I K   G++
Subjt:  FLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL

AT4G21215.2 unknown protein1.4e-1337.16Show/hide
Query:  LQSNLSRKVSQR------------GGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFR
        LQ N+SRK S R            G D  I+   +P+   S  E A+ V     A    +A   +      HQIT+TT+ TAA +              R
Subjt:  LQSNLSRKVSQR------------GGDMMIATSSAPMAEKSAAETAAEV-----ALVVGSAKDHLGVQQFHHQITITTSNTAAAD---------EHALFR

Query:  RNSFRRSSSSWFLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL
        ++SF+RS +SW LDPKK++LFFAT+S +GS++LI FTL+I K   G++
Subjt:  RNSFRRSSSSWFLDPKKVLLFFATVSCIGSMVLICFTLAIGKPTAGEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCCCAAATTGTTGCAGAGTAATCTATCTCGAAAAGTGTCTCAGCGTGGCGGCGATATGATGATTGCTACCAGTTCCGCTCCTATGGCGGAAAAATCAGCGGC
GGAAACGGCGGCGGAGGTGGCATTGGTAGTTGGGTCTGCAAAAGACCATCTGGGTGTTCAACAATTTCATCATCAAATCACTATAACCACCAGCAACACGGCGGCGGCGG
ATGAACATGCTCTGTTTCGAAGAAACAGTTTCAGGAGGTCTTCTTCGTCCTGGTTTTTGGATCCCAAGAAAGTTCTTCTCTTCTTTGCCACTGTGTCATGTATTGGAAGT
ATGGTGCTGATATGCTTCACTCTGGCCATCGGAAAACCCACCGCCGGCGAACTGGGGTTCCATTAA
mRNA sequenceShow/hide mRNA sequence
CTATAAATATGAACAAATCAGTTCTCAAATCAGGTAGTTTCTGATAATTTTTCAACCAAATTCTGCAGTTCCAGCTGCGGAATTCTTCACGAAGAACAGAGCCTCTTTTT
CTCGCCCAATTCATTTTCTTTCCCGAGAAAGTGATGGAAAATCCCAAATTGTTGCAGAGTAATCTATCTCGAAAAGTGTCTCAGCGTGGCGGCGATATGATGATTGCTAC
CAGTTCCGCTCCTATGGCGGAAAAATCAGCGGCGGAAACGGCGGCGGAGGTGGCATTGGTAGTTGGGTCTGCAAAAGACCATCTGGGTGTTCAACAATTTCATCATCAAA
TCACTATAACCACCAGCAACACGGCGGCGGCGGATGAACATGCTCTGTTTCGAAGAAACAGTTTCAGGAGGTCTTCTTCGTCCTGGTTTTTGGATCCCAAGAAAGTTCTT
CTCTTCTTTGCCACTGTGTCATGTATTGGAAGTATGGTGCTGATATGCTTCACTCTGGCCATCGGAAAACCCACCGCCGGCGAACTGGGGTTCCATTAACGGCGAGGAAA
CCAAGAACTGCCATGGCAACACGATGAAAAATGTTTGGACAAAGCGATAGAAATAACGAGAAAGACAAAAGGGCAGCTTCAAAGTAAGAAAGTGACTAACAAAGGGAATC
TTTCCTTTCTCGAGCACCTCGTATCCTTGAACCGATAACTATCTTTCAGCCCAATCGAGCTTTTTCGTCCCTCCA
Protein sequenceShow/hide protein sequence
MENPKLLQSNLSRKVSQRGGDMMIATSSAPMAEKSAAETAAEVALVVGSAKDHLGVQQFHHQITITTSNTAAADEHALFRRNSFRRSSSSWFLDPKKVLLFFATVSCIGS
MVLICFTLAIGKPTAGELGFH