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CmoCh18G003050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationCmo_Chr18:1966047..1967722
RNA-Seq ExpressionCmoCh18G003050
SyntenyCmoCh18G003050
Gene Ontology termsGO:0140013 - meiotic nuclear division (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWK AKSIFD  SSTITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3678.22Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQ VE +WNFVVKE TK+E Y FIK+P+RLLHDAAR GN EFLIIL    PD+LWK DD+ KSIFHIAVENRQ+SVFSLIYEIGGLKDFLANFHD++
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  K
        K
Subjt:  K

KAG6573216.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0464Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWKTAKSIFD  SS ITMKITD + TALHIA    H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

XP_022954631.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita moschata]1.1e-3777.45Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQIVE +WNFV+ + T  E +EFIKHPTRLLHDAAR GNVEFLIIL    P++LWKC+DE KSIFH+AVENRQ+SVF+LIYE+GGLKDFLANFHDKQ
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  KN
        KN
Subjt:  KN

XP_022954631.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita moschata]4.3e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWKTAKSIFD  SS ITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

XP_022954631.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita moschata]1.6e-3678.22Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQ VE +WNFVVKE TK+E Y FIK+P+RLLHDAAR GN EFLIIL    PD+LWK DD+ KSIFHIAVENRQ+SVFSLIYEIGGLKDFLANFHD++
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  K
        K
Subjt:  K

XP_022954800.1 ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]5.6e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWK AKSIFD  SSTITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

XP_022954800.1 ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]1.6e-3677.23Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQIVE +WNFV+ + T  E +EFIKHPTRLLHDAAR GNVEFLIIL    P++LWKC+DE KSIFH+AVENRQ+SVF+LIYEIGGLKD LANFHDKQ
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  K
        K
Subjt:  K

XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]5.6e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWK AKSIFD  SSTITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]1.6e-3678.22Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQ VE +WNFVVKE TK+E Y FIK+P+RLLHDAAR GN EFLIIL    PD+LWK DD+ KSIFHIAVENRQ+SVFSLIYEIGGLKDFLANFHD++
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A5A7UP28 Ankyrin repeat-containing protein9.2e-0665.38Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFVVK
        A+K DWKTAKSIFD  SS ITMKITDGE T LHIAA   H  +  V N V K
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFVVK

A0A6J1C944 ankyrin repeat-containing protein ITN1-like7.8e-0564Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWKTAKSIF   SS +TMKITD E TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

A0A6J1C944 ankyrin repeat-containing protein ITN1-like4.4e-3268.63Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQ VE +WNFVVK  +K + Y FIK P+RLLH+AA AGN EFLIIL    P+++WK DD+ KSIFH+AVENRQ+SVFSLIYEIGGL+DFLAN++D +
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  KN
        KN
Subjt:  KN

A0A6J1GRE6 ankyrin repeat-containing protein At5g02620-like5.4e-3877.45Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQIVE +WNFV+ + T  E +EFIKHPTRLLHDAAR GNVEFLIIL    P++LWKC+DE KSIFH+AVENRQ+SVF+LIYE+GGLKDFLANFHDKQ
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  KN
        KN
Subjt:  KN

A0A6J1GRE6 ankyrin repeat-containing protein At5g02620-like2.1e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWKTAKSIFD  SS ITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

A0A6J1GRE6 ankyrin repeat-containing protein At5g02620-like7.8e-3778.22Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQ VE +WNFVVKE TK+E Y FIK+P+RLLHDAAR GN EFLIIL    PD+LWK DD+ KSIFHIAVENRQ+SVFSLIYEIGGLKDFLANFHD++
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  K
        K
Subjt:  K

A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like2.7e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWK AKSIFD  SSTITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like1.0e-3677.45Show/hide
Query:  LAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQK
        LAHQ VE +WNFVVKE TK+E Y FIK+P+RLLHDAAR GN EFLIIL    PD+LWK DD+ KSIFHIAVENRQ+SVFSLIYEIGGLKDFLANFHD++K
Subjt:  LAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQK

Query:  NL
         L
Subjt:  NL

A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like2.7e-0566Show/hide
Query:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV
        ALK DWK AKSIFD  SSTITMKITD + TALHIAA   H  +  V N V
Subjt:  ALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFV

A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like1.2e-3473.53Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAHQIVE +W FVV+E TKQE  +FIK P+RLLHDAA+ GN EFLIIL    PD+LWK D+++KSIFHIAVENRQ+SVFSLIYEI GLKDF+AN+HDK+
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  KN
        KN
Subjt:  KN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18670.1 Ankyrin repeat family protein1.8e-0627.83Show/hide
Query:  LHIAATLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFL--IILYVPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLAN
        L +    A +I++ +   + K    Q++   +    + L  A   G VE++  ++ + PD++W  +    +IF  AV  RQ+ +FSLIY IG  K+ LA 
Subjt:  LHIAATLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFL--IILYVPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLAN

Query:  ----FHDKQKNLTCY
            FH+   +   Y
Subjt:  ----FHDKQKNLTCY

AT3G54070.1 Ankyrin repeat family protein4.1e-1447.22Show/hide
Query:  LLHDAARAGNVEFLIILYVP--DMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKNLT
        LL DAA  GNVE L+IL     D+LW  D+ ++++FH+A   R +++FSLIYE+GG+KD +A++ +KQ   T
Subjt:  LLHDAARAGNVEFLIILYVP--DMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKNLT

AT5G04680.1 Ankyrin repeat family protein3.8e-0438.81Show/hide
Query:  AARAGNVEFLI--ILYVPDMLWKCDDESKS-IFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKN
        A R GNV+FL+  I    ++LW     S S +F +AVE RQ+ VF+L+Y +   K  L    D   N
Subjt:  AARAGNVEFLI--ILYVPDMLWKCDDESKS-IFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKN

AT5G04690.1 Ankyrin repeat family protein3.8e-0433.8Show/hide
Query:  AARAGNVEFLI--ILYVPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKNLTCYI
        A R GNV+FL+  I    ++LW     + ++F+ AV+ RQ+ VFSL+Y +G  K       D   N   ++
Subjt:  AARAGNVEFLI--ILYVPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKNLTCYI

AT5G35810.1 Ankyrin repeat family protein6.5e-2043.14Show/hide
Query:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ
        TLAH +VE +W+FV+K    +E  +F+     LL DAA++GN+E L+IL    PD++W  D +++S+FHIA  NR + +F+ IYE+G +KD +A + +K+
Subjt:  TLAHQIVELVWNFVVKEHTKQEQYEFIKHPTRLLHDAARAGNVEFLIILY--VPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQ

Query:  KN
         N
Subjt:  KN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATGAGCAGAGCTTATCGATAGTGAGGTCGATGACGATGATGAAAGCCATCGATACTTCGATGCCAATGACTTCCATGTCGATGAAACCCAAAACGGCG
GTATACAATCTAATGTCATTTCAACTTTCAGGACGGAAATGGACTGCTTTAAAGAGTGATTGGAAGACAGCCAAATCCATATTTGACTCATATTCATCAACTATT
ACTATGAAGATTACTGATGGAGAGGCCACTGCTCTTCATATTGCTGCGACATTAGCCCATCAAATTGTGGAACTTGTATGGAACTTTGTTGTCAAAGAACATACA
AAACAAGAGCAATATGAGTTTATAAAACACCCCACAAGGTTATTGCATGATGCTGCAAGAGCTGGAAATGTTGAGTTCTTGATAATACTATATGTTCCTGATATG
CTATGGAAATGTGATGATGAAAGCAAAAGCATATTTCATATAGCAGTTGAAAATCGACAAAAAAGTGTATTCAGTTTAATATATGAGATCGGAGGCCTCAAGGAT
TTTCTTGCCAACTTCCACGATAAACAAAAAAATTTAACATGCTACATTTTGCTGGATTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATGAGCAGAGCTTATCGATAGTGAGGTCGATGACGATGATGAAAGCCATCGATACTTCGATGCCAATGACTTCCATGTCGATGAAACCCAAAACGGCG
GTATACAATCTAATGTCATTTCAACTTTCAGGACGGAAATGGACTGCTTTAAAGAGTGATTGGAAGACAGCCAAATCCATATTTGACTCATATTCATCAACTATT
ACTATGAAGATTACTGATGGAGAGGCCACTGCTCTTCATATTGCTGCGACATTAGCCCATCAAATTGTGGAACTTGTATGGAACTTTGTTGTCAAAGAACATACA
AAACAAGAGCAATATGAGTTTATAAAACACCCCACAAGGTTATTGCATGATGCTGCAAGAGCTGGAAATGTTGAGTTCTTGATAATACTATATGTTCCTGATATG
CTATGGAAATGTGATGATGAAAGCAAAAGCATATTTCATATAGCAGTTGAAAATCGACAAAAAAGTGTATTCAGTTTAATATATGAGATCGGAGGCCTCAAGGAT
TTTCTTGCCAACTTCCACGATAAACAAAAAAATTTAACATGCTACATTTTGCTGGATTACTAG
Protein sequenceShow/hide protein sequence
MRDEQSLSIVRSMTMMKAIDTSMPMTSMSMKPKTAVYNLMSFQLSGRKWTALKSDWKTAKSIFDSYSSTITMKITDGEATALHIAATLAHQIVELVWNFVVKEHT
KQEQYEFIKHPTRLLHDAARAGNVEFLIILYVPDMLWKCDDESKSIFHIAVENRQKSVFSLIYEIGGLKDFLANFHDKQKNLTCYILLDY