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CmoCh18G003060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationCmo_Chr18:1968784..1969213
RNA-Seq ExpressionCmoCh18G003060
SyntenyCmoCh18G003060
Gene Ontology termsNA
InterPro domainsIPR026961 - PGG domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2157.03Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  LA  A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

XP_022954800.1 ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]3.6e-2157.03Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  LA  A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

XP_022994346.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita maxima]3.6e-2157.03Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  LA  A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

XP_023542596.1 ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]1.0e-2056.25Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  L   A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

XP_038894043.1 ankyrin repeat-containing protein At5g02620-like [Benincasa hispida]1.5e-1954.69Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGN+DKEG PIF +N AFT+FVISDV A+V ST SI  F+SILTSR   + +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M   MAFS+ F IAY K + K  L  AA
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

TrEMBL top hitse value%identityAlignment
A0A5A7UP28 Ankyrin repeat-containing protein1.4e-1853.54Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDK G P F +N AFT+FVI+DV A+VFST SI  F+SILTSR   + +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATA
        M  V+AFS+ F IAY K +    LA A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATA

A0A6J1C944 ankyrin repeat-containing protein ITN1-like7.3e-2053.08Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGND+  GIPIF EN AFT+FV+SDV A++ ST SI  F+SILTSR   + +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAAAG
        M  V+AFS+ F IAY K + +  LA AA G
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAAAG

A0A6J1GRE6 ankyrin repeat-containing protein At5g02620-like3.6e-1953.49Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK T  S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N  FT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAAA
        M  V+AF +AF IAY K + K   A   A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAAA

A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like1.7e-2157.03Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  LA  A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like1.7e-2157.03Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC
        MK TA S MLVATLI TVVF AAFTVPGGNDDKEGIPIF +N AFT+FVISDV A+V ST SI  F+SILTSR     +                +   C
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGA------------IGFYC

Query:  MHGVMAFSSAFIIAYYKIRGKATLATAA
        M  V+AFS+AF IAY K + K  LA  A
Subjt:  MHGVMAFSSAFIIAYYKIRGKATLATAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54070.1 Ankyrin repeat family protein3.6e-1154.43Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE------GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR
        MK TA + ML ATLI TVVF AA T+PGGNDD        G P F +   F IF +SD VA+  S +SI IF+SI TSR
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE------GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR

AT5G04690.1 Ankyrin repeat family protein1.5e-0950Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE-GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR
        MK TA S  LVA LIVTV F A FTVPGG DD   G P       F IF++SD+++   +  S+ IF+ ILT+R
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE-GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR

AT5G04700.1 Ankyrin repeat family protein8.0e-1152.7Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDD-KEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR
        MK TA S  LVA LIVTV F A FTVPGG DD  +G P  L +  F IF++SD+++   S  S+ IF+ ILT+R
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDD-KEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR

AT5G04730.1 Ankyrin-repeat containing protein3.0e-1050.68Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR
        MK TA +   VA LI TV F A FTVPGG D   G P+ L +  F  F+ +D +A   S IS+ IF+SILTSR
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR

AT5G35810.1 Ankyrin repeat family protein1.5e-1255.13Show/hide
Query:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE-----GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR
        MK TA + +LV+TLI TVVF AAFT+PGGND        G P F + + F +F+ISD VA++ S  SI IF+SILTSR
Subjt:  MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKE-----GIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCACTGCAGGCTCATTCATGCTAGTGGCAACGCTAATTGTAACCGTGGTTTTCACAGCAGCGTTCACAGTTCCAGGAGGCAACGATGATAAGGAAGGAATTCC
TATATTTCTAGAGAATTATGCGTTTACAATATTTGTAATATCAGATGTTGTGGCTGTTGTATTTTCCACAATTTCTATATTCATCTTTGTATCAATCTTGACGTCGCGCA
ATGAAGTTAATGCGTGGGCTGCTGGCGCTATTGGTTTCTATTGCATGCATGGTGTAATGGCTTTCAGCTCAGCCTTCATTATTGCGTATTATAAAATAAGGGGGAAGGCA
ACATTGGCCACTGCAGCAGCAGGGTGGAATTTTGGTCAACTTCTTGGTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATCACTGCAGGCTCATTCATGCTAGTGGCAACGCTAATTGTAACCGTGGTTTTCACAGCAGCGTTCACAGTTCCAGGAGGCAACGATGATAAGGAAGGAATTCC
TATATTTCTAGAGAATTATGCGTTTACAATATTTGTAATATCAGATGTTGTGGCTGTTGTATTTTCCACAATTTCTATATTCATCTTTGTATCAATCTTGACGTCGCGCA
ATGAAGTTAATGCGTGGGCTGCTGGCGCTATTGGTTTCTATTGCATGCATGGTGTAATGGCTTTCAGCTCAGCCTTCATTATTGCGTATTATAAAATAAGGGGGAAGGCA
ACATTGGCCACTGCAGCAGCAGGGTGGAATTTTGGTCAACTTCTTGGTCCATAA
Protein sequenceShow/hide protein sequence
MKITAGSFMLVATLIVTVVFTAAFTVPGGNDDKEGIPIFLENYAFTIFVISDVVAVVFSTISIFIFVSILTSRNEVNAWAAGAIGFYCMHGVMAFSSAFIIAYYKIRGKA
TLATAAAGWNFGQLLGP