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CmoCh18G003070 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003070
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAnkyrin repeat-containing protein
Genome locationCmo_Chr18:1974628..1977608
RNA-Seq ExpressionCmoCh18G003070
SyntenyCmoCh18G003070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573174.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]2.9e-0558.06Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
        M VAFS AF IAYDKT  KIP+AI    ILP+  F + H KLVVDI     W  S FS RQR
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
KAG6573216.1 Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia]4.4e-0656.14Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
        M VAF  AF IAYDKT  KIP AI  A ILP+  F+LCH +LVVD+     WS+ +F
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
XP_022954631.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita moschata]4.4e-0659.65Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
        M VAF  AF IAYDKT  KIP AI  A ILP+  F LCH KLVVDI     WS+ +F
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
XP_022954800.1 ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]2.9e-0558.06Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
        M VAFS AF IAYDKT  KIP+AI    ILP+  F + H KLVVDI     W  S FS RQR
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
XP_022994346.1 ankyrin repeat-containing protein At5g02620-like [Cucurbita maxima]2.9e-0558.06Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
        M VAFS AF IAYDKT  KIP+AI    ILP+  F + H KLVVDI     W  S FS RQR
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
TrEMBL top hitse value%identityAlignment
A0A5A7UPC2 Ankyrin repeat-containing protein1.2e-0450Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSR
        M VAFS  F IAYDKTN K P+AI    ++PI  F + H +LVVDI     WS  +F  R
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSR
A0A5D3BJ79 Ankyrin repeat-containing protein1.2e-0448.33Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSR
        M VAFS  F IAYDKTN K+P+AI    ++PI  F + H +L+VDI     WS  +F  R
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSR
A0A6J1GRE6 ankyrin repeat-containing protein At5g02620-like2.1e-0659.65Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
        M VAF  AF IAYDKT  KIP AI  A ILP+  F LCH KLVVDI     WS+ +F
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTF
A0A6J1GTF5 ankyrin repeat-containing protein ITN1-like1.4e-0558.06Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
        M VAFS AF IAYDKT  KIP+AI    ILP+  F + H KLVVDI     W  S FS RQR
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
A0A6J1JYW0 ankyrin repeat-containing protein At5g02620-like1.4e-0558.06Show/hide
Query:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
        M VAFS AF IAYDKT  KIP+AI    ILP+  F + H KLVVDI     W  S FS RQR
Subjt:  MHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDI-----WSLSTFSSRQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGAAACACGGCAAACTCATGCATGCTAGTGTCATTGTCGTTGCCGATCAAGTTACTGATTGGGGTACTGATGCTATTCGTTTCTATAGCATGCATGTGGCATT
CAGCACAGCCTTCATTATTGCTTATGATAAAACAAACGAGAAGATTCCAATGGCCATTGTAGTGGCAGAGATCCTCCCAATATGGAGTTTTTGGTTGTGTCACGATAAAC
TTGTAGTGGACATATGGTCATTGTCTACATTTTCTTCGAGGCAGCGATGTGAATCAGGGGACGATAAAGAACGGTTCCATCTGATATTTGTCATTTATGAGGCATTGGTT
TCAACTAGTGAGACGACACAACACAGTGAAACCACTTATTACCTTAACCTCATCAACATCAACAGTGAGAAACAGAGCATCTGGGTAATTAAAAGCCAGTTCTTCAAAGA
ATGGATTCATAGCAACAGAAGGCATGCACCAAGAAGCAGTGAAGTGCACAACAATCTACAAAACCCACAGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGAAACACGGCAAACTCATGCATGCTAGTGTCATTGTCGTTGCCGATCAAGTTACTGATTGGGGTACTGATGCTATTCGTTTCTATAGCATGCATGTGGCATT
CAGCACAGCCTTCATTATTGCTTATGATAAAACAAACGAGAAGATTCCAATGGCCATTGTAGTGGCAGAGATCCTCCCAATATGGAGTTTTTGGTTGTGTCACGATAAAC
TTGTAGTGGACATATGGTCATTGTCTACATTTTCTTCGAGGCAGCGATGTGAATCAGGGGACGATAAAGAACGGTTCCATCTGATATTTGTCATTTATGAGGCATTGGTT
TCAACTAGTGAGACGACACAACACAGTGAAACCACTTATTACCTTAACCTCATCAACATCAACAGTGAGAAACAGAGCATCTGGGTAATTAAAAGCCAGTTCTTCAAAGA
ATGGATTCATAGCAACAGAAGGCATGCACCAAGAAGCAGTGAAGTGCACAACAATCTACAAAACCCACAGAGATAA
Protein sequenceShow/hide protein sequence
MDEKHGKLMHASVIVVADQVTDWGTDAIRFYSMHVAFSTAFIIAYDKTNEKIPMAIVVAEILPIWSFWLCHDKLVVDIWSLSTFSSRQRCESGDDKERFHLIFVIYEALV
STSETTQHSETTYYLNLININSEKQSIWVIKSQFFKEWIHSNRRHAPRSSEVHNNLQNPQR