; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G003110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationCmo_Chr18:1986879..1988808
RNA-Seq ExpressionCmoCh18G003110
SyntenyCmoCh18G003110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573220.1 hypothetical protein SDJN03_27107, partial [Cucurbita argyrosperma subsp. sororia]3.9e-9098.3Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRN+QHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
        MILSWITLAIGFSMLVAGTVDNSKRKNSC+ISSHGLFLIGGIVCFIHGL TVAYYVSATAAYREEERKSKEKPSVP
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP

KAG7012393.1 hypothetical protein SDJN02_25145, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-8997.73Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MA NYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYEC RKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
        MILSWITLAIGFSMLVAGTVDNSKRKNS +ISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP

XP_022954638.1 uncharacterized protein LOC111456841 [Cucurbita moschata]1.0e-93100Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
        MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV

XP_022994470.1 uncharacterized protein LOC111490180 [Cucurbita maxima]2.1e-9198.86Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLW YECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
        MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERK+KEKPSVP
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP

XP_023542772.1 uncharacterized protein LOC111802580 [Cucurbita pepo subsp. pepo]2.7e-9198.86Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MA+NYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
        MILSWITLAIGFSMLVAGTVDNSKRKNSC+ISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP

TrEMBL top hitse value%identityAlignment
A0A0A0LRQ0 Uncharacterized protein4.7e-6575.56Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGG--CIWIRNMQHFQQSNANRRLGL
        M RNYGFLVCILV+V+DAVAGLL I AEKAQN+V L+S S+ + ECSRKPRDDAFS+GLAA+ILLGLAH IAKVLGG  CI IRN Q+ Q+ +AN+ LG 
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGG--CIWIRNMQHFQQSNANRRLGL

Query:  LFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
        LFMILSWITLAIGFS+L+A T+DNSK KNSC+ISSHGLFL GGIVCF HGLCTVAYYVSATAAYREE+R SK  P    V
Subjt:  LFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV

A0A1S3B4I4 uncharacterized protein LOC1034857084.0e-6474.44Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGG--CIWIRNMQHFQQSNANRRLGL
        M RNYGFLVCILVMV+D VAGLL I AEKAQN+V L+S S+ V ECSRKPRDDAFS+GLAA ILLGLAH IA VLGG  CI+I N Q+ Q+ +AN+ LGL
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGG--CIWIRNMQHFQQSNANRRLGL

Query:  LFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
         FMILSWITL IGFS+L+A T+DNSK KNSC+ISSHGLFL GGIVCF+HGLCTVAYYVSATAAYREE+R SK  P    V
Subjt:  LFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV

A0A6J1CGZ6 uncharacterized protein LOC1110107665.0e-7583.15Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MA+NYGFLVCILVMVMDAVAG+L IRAEKAQN+V LQS S+WVYECSRKPRDDAFSQGLA TILLGLAHAIAKVLG CI IR+ QHFQ+S+AN+RLGL F
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
        MILSWITLAIGFSML+AGTVDNS  KNSC+ISS GLFL GGIVCF HGLCTVAYYVSATAA REE+RK  E  S PHV
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV

A0A6J1GRM8 uncharacterized protein LOC1114568414.8e-94100Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
        MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV

A0A6J1K198 uncharacterized protein LOC1114901801.0e-9198.86Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLW YECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP
        MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERK+KEKPSVP
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)1.6e-1229.48Show/hide
Query:  LVCILVMV-MDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCI--WIRNMQHFQQSNANRRLGLLFMILS
        +VCI++ V +D VAG + ++A+ AQ  VK         EC + P   AF  G+ A   L  AH  A V+G  I    + +    ++       +  + L 
Subjt:  LVCILVMV-MDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCI--WIRNMQHFQQSNANRRLGLLFMILS

Query:  WITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVS---ATAAYREEERKSKEKPS
        W+    G  +L  G   N++ +  C+ +++ +F IGG VCF+H + +  YY+S   A A +    + +K KPS
Subjt:  WITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVS---ATAAYREEERKSKEKPS

AT1G11500.1 Protein of unknown function (DUF1218)1.2e-3139.77Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQV----KLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRL
        M    GFLV ++++  D  A +L I AE AQ++       Q        C R P D AF++G+AA +LL + H +A VLGGC +IR+ Q F+++ AN+ L
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQV----KLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRL

Query:  GLLFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEK
         + F++LSWI   + +S L+ GT+ NS+    C +     FLIGGI C  HG+ T AYYVSA AA +E++  ++++
Subjt:  GLLFMILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEK

AT2G32280.1 Protein of unknown function (DUF1218)1.6e-3645.12Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        M +  G LVC++++ +D  A +L I+AE AQNQVK     LW++EC R+P  DAF  GL A  +L +AH +  ++GGC+ I +   FQ+S++ R++ +  
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYRE
        ++L+WI  A+GF  +V GT+ NSK ++SC  + H    IGGI+CF+H L  VAYYVSATAA  E
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYRE

AT4G21310.1 Protein of unknown function (DUF1218)6.5e-4352.12Show/hide
Query:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF
        MARN GF +CIL++ MD  AG+L I AE AQN+VK     +W++EC R P   AF  GLAA ILL LAH  A  LGGC+ + + Q  ++S+AN++L +  
Subjt:  MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLF

Query:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREE
        +I +WI LAI FSML+ GT+ NS+ + +C IS H +  IGGI+CF+HGL  VAYY+SATA+ RE+
Subjt:  MILSWITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCGAAATTATGGCTTTCTGGTCTGCATTTTGGTCATGGTAATGGACGCTGTTGCTGGATTGCTTGCCATTCGAGCTGAAAAGGCTCAGAATCAGGTGAAA
TTACAATCGGAGAGCTTATGGGTGTATGAATGCAGCAGAAAGCCGAGAGATGATGCTTTTTCTCAGGGGTTGGCTGCTACTATTCTGCTTGGCCTCGCTCATGCC
ATTGCTAAAGTGCTTGGTGGGTGCATTTGGATTAGGAATATGCAACATTTCCAGCAATCAAATGCTAACAGGCGATTGGGATTGCTCTTCATGATTCTCTCATGG
ATTACTTTGGCTATTGGGTTCTCAATGTTGGTGGCGGGGACGGTGGACAATTCCAAGAGGAAAAACTCTTGTAAGATATCAAGTCATGGGCTGTTTTTGATCGGT
GGGATTGTGTGTTTCATTCATGGGCTCTGTACTGTCGCTTACTATGTTTCTGCCACAGCAGCTTACAGAGAGGAAGAGAGGAAATCCAAAGAAAAGCCTTCTGTT
CCACATGTTTAA
mRNA sequenceShow/hide mRNA sequence
TCTTTGCTTATTTAAACCGAGAAATTCATTTCTTTGCTGATTTCTTGCCAGAGCTGTGATGATAGGACTAAGGAATCTGGAAGCGTTAGAAAATTTCTTGGGATC
CTGTTCATTCCTTGACTCCCATGGAAGGCATCTGCACCAAAAAGAAGAGGGATAACTACAGAAAGGAAAGAAGCTTTCCTGTAAATTTTGTCTCCATAGATGATT
CCTTCCATACGTGTAATAGTGCAATCATGGGTTTCCTTTATTCCATCTTCCTTTCTCAAATTCTGACCTCCTTAACCTTTATTCCCGATCACAAATCTTGAGAAG
AGCTCTGAATTTCGCTGTAGATATGGCGCGAAATTATGGCTTTCTGGTCTGCATTTTGGTCATGGTAATGGACGCTGTTGCTGGATTGCTTGCCATTCGAGCTGA
AAAGGCTCAGAATCAGGTGAAATTACAATCGGAGAGCTTATGGGTGTATGAATGCAGCAGAAAGCCGAGAGATGATGCTTTTTCTCAGGGGTTGGCTGCTACTAT
TCTGCTTGGCCTCGCTCATGCCATTGCTAAAGTGCTTGGTGGGTGCATTTGGATTAGGAATATGCAACATTTCCAGCAATCAAATGCTAACAGGCGATTGGGATT
GCTCTTCATGATTCTCTCATGGATTACTTTGGCTATTGGGTTCTCAATGTTGGTGGCGGGGACGGTGGACAATTCCAAGAGGAAAAACTCTTGTAAGATATCAAG
TCATGGGCTGTTTTTGATCGGTGGGATTGTGTGTTTCATTCATGGGCTCTGTACTGTCGCTTACTATGTTTCTGCCACAGCAGCTTACAGAGAGGAAGAGAGGAA
ATCCAAAGAAAAGCCTTCTGTTCCACATGTTTAACCCAATTGACACCCATTGCCTCCTGTAATGACATTATAATAACTTCAAATTTATTGGTTCTTTATGAAATT
TTGAGTCCACAGCTTAGTTCATGTTGGAAACATCTGTTGTTTTCCTGTTCCAACATTTGCC
Protein sequenceShow/hide protein sequence
MARNYGFLVCILVMVMDAVAGLLAIRAEKAQNQVKLQSESLWVYECSRKPRDDAFSQGLAATILLGLAHAIAKVLGGCIWIRNMQHFQQSNANRRLGLLFMILSW
ITLAIGFSMLVAGTVDNSKRKNSCKISSHGLFLIGGIVCFIHGLCTVAYYVSATAAYREEERKSKEKPSVPHV