; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G003360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationCmo_Chr18:2198346..2200611
RNA-Seq ExpressionCmoCh18G003360
SyntenyCmoCh18G003360
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573252.1 hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sororia]2.6e-8999.44Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCF+
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

XP_022954617.1 uncharacterized protein LOC111456828 [Cucurbita moschata]1.5e-89100Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

XP_022994479.1 uncharacterized protein LOC111490189 [Cucurbita maxima]5.4e-8797.22Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVV SGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLC GKALRPSGSRAWAITLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRG+FGAGAAFIVFTCVASELFY+SFSKAHNQTSSFAKDTGIRMAS+
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

XP_023542784.1 uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo]3.4e-8999.44Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFA+QVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

XP_038905949.1 uncharacterized protein LOC120091872 [Benincasa hispida]4.7e-8390Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLV++VVF+ DLVAFALAVAAEQRRTTATVVQSG SKFCAYDSD+ATGLGVGSLL+LFASQVIVMVASRCLCCG+ LRP GSRAWAITLFITCW+CF 
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSS+MNE+ISCKMLRRGVFGAGAAFIVFTC ASELFY+SFSKAH QTSSFAKDTGIRMAS+
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

TrEMBL top hitse value%identityAlignment
A0A1S3B5C0 uncharacterized protein LOC1034861881.5e-8288.89Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLV++VVF+ DLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LFASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCW+CF 
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +T+SFAKDTGIRMAS+
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

A0A5A7UTY8 DnaJ subfamily C member 221.5e-8288.89Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLV++VVF+ DLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LFASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCW+CF 
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH +T+SFAKDTGIRMAS+
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

A0A6J1CEZ1 uncharacterized protein LOC1110106321.9e-8289.44Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        M MLV+VVVFV DLVAFALAVAAEQRRTTA VVQSGN++FCAYDSDIATGLGVGSLL LFASQVI+MVASRCLCCGK+LRPSGSRAWA+TLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAE CLLAASVRNAYHTKY+SSI+NE+ISCKMLR+GVFGAGAAFIVFTCVASELFY+SFSKAH+QTSSFAKDTGIRMA++
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

A0A6J1GRF5 uncharacterized protein LOC1114568287.3e-90100Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

A0A6J1K1A5 uncharacterized protein LOC1114901892.6e-8797.22Show/hide
Query:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL
        MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVV SGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLC GKALRPSGSRAWAITLFITCWVCFL
Subjt:  MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFL

Query:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRG+FGAGAAFIVFTCVASELFY+SFSKAHNQTSSFAKDTGIRMAS+
Subjt:  IAEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13380.1 Protein of unknown function (DUF1218)8.6e-3546.58Show/hide
Query:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQS--GNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI
        LV ++V  L LVAF  ++AAE+RR+    +Q    N+ FC YDSD+ATG GVG+ L L +S+ ++M  ++C+C G+ L P   RAW+I  FI+ W+ FL+
Subjt:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQS--GNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI

Query:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA
        AE C++A + +NAYHTKY+SS   +  SC  LR+G+F AGA FIV T V +  +Y+ F+K+
Subjt:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA

AT1G52910.1 Protein of unknown function (DUF1218)3.7e-4657.58Show/hide
Query:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKF--CAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI
        LV+++VF+LDL+A  LA+AAEQRR+   VV  G  +F  C Y SDIAT  G G+ ++LF SQVI+MVASRC CCGKAL+P GSRA  I LF+ CWV FLI
Subjt:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKF--CAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI

Query:  AEICLLAASVRNAYHTKY--VSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN
        AE+CLLA S+RNAYHT Y  + +I N   SC+++R+GVF AGA+F +FT + S+ +YIS+S+A +
Subjt:  AEICLLAASVRNAYHTKY--VSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN

AT1G61065.1 Protein of unknown function (DUF1218)1.1e-5362.57Show/hide
Query:  MLVVVVVFVLDLVAFALAVAAEQRRTTATVV-QSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI
        +L++++VFV DL+AF LAVAAEQRRTT  +  +S +  +C YD DIATGLGVGS LVL ASQ+++MVASRCLCCG+AL PSGSR+WAI LFIT WV F I
Subjt:  MLVVVVVFVLDLVAFALAVAAEQRRTTATVV-QSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI

Query:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI
        A++CLLA SVRNAYHTKY     N   SC+ LR+GVFGAGAAFIV T + SEL+Y++ S+A +   S  +D GIRM+S+
Subjt:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI

AT3G15480.1 Protein of unknown function (DUF1218)1.3e-4353.66Show/hide
Query:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI
        LVV++VF+LDL+A  LA+AAEQRR+   V    + +  +C Y +DIAT  G G+ ++LF SQV++M ASRC CCGK+L P GSRA AI LF+ CWV FLI
Subjt:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI

Query:  AEICLLAASVRNAYHTKYVSS-IMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN
        AE+CLLAAS+RNAYHT+Y     + +  SC+++R+GVF AGAAF +FT + S+ +Y+ +S+A +
Subjt:  AEICLLAASVRNAYHTKYVSS-IMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHN

AT4G27435.1 Protein of unknown function (DUF1218)1.9e-4255.28Show/hide
Query:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI
        +V  +VFV +L+AF LAVAAEQRR+TA VVQ    +  +C YDSD ATG GVG+ L   ASQ+++M+ SRC CCGK L+P GSRA A+ LFI  W+ FLI
Subjt:  LVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLI

Query:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA
        AEICLLA SV NAYHTKY +  M+    C+ LR+GVF AGA+F+ F  + S+ +Y  +  A
Subjt:  AEICLLAASVRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGCTGGTTGTGGTTGTGGTGTTTGTCCTTGATTTGGTTGCTTTTGCCCTTGCTGTTGCTGCAGAGCAAAGAAGAACCACTGCCACGGTGGTTCAATCAGGCAA
TTCTAAATTCTGTGCCTATGACTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGGTCCTGTTTGCCAGCCAAGTGATCGTTATGGTGGCAAGTCGATGCTTAT
GCTGTGGGAAAGCTTTGCGACCGAGCGGTTCGAGGGCTTGGGCAATTACCCTTTTCATCACTTGCTGGGTATGTTTTCTCATTGCTGAGATCTGTCTGTTGGCTGCTTCG
GTTCGAAATGCGTACCATACCAAGTATGTGAGTTCTATAATGAACGAGCGAATTTCGTGCAAGATGCTGAGGAGAGGAGTGTTCGGGGCTGGGGCTGCTTTTATCGTCTT
CACATGTGTAGCATCAGAGCTGTTCTATATTAGCTTTTCCAAGGCTCATAACCAGACGTCCTCCTTTGCTAAGGACACTGGCATTAGAATGGCAAGCATATAG
mRNA sequenceShow/hide mRNA sequence
AATAAAAAATAAGCGGCTCGAAGAAATGACATTCACTTTCCTTTCTTCTACCCGCGCTTGAAGAGAAGGCGAACAGAAAACAGAGTTATTGCAGAGCTCACGGCCCTTTG
ATTTTCCCATTCGTTCTCCTTATAAACCCATCTTTAAGTGAAATCCATTACAGGAATTTGTTCTGTTTGTAAGGTTTTTTTAGATTGTCGGATCGTTGAGACATGGGTAT
GCTGGTTGTGGTTGTGGTGTTTGTCCTTGATTTGGTTGCTTTTGCCCTTGCTGTTGCTGCAGAGCAAAGAAGAACCACTGCCACGGTGGTTCAATCAGGCAATTCTAAAT
TCTGTGCCTATGACTCTGATATTGCAACTGGCTTAGGTGTGGGTTCACTTCTGGTCCTGTTTGCCAGCCAAGTGATCGTTATGGTGGCAAGTCGATGCTTATGCTGTGGG
AAAGCTTTGCGACCGAGCGGTTCGAGGGCTTGGGCAATTACCCTTTTCATCACTTGCTGGGTATGTTTTCTCATTGCTGAGATCTGTCTGTTGGCTGCTTCGGTTCGAAA
TGCGTACCATACCAAGTATGTGAGTTCTATAATGAACGAGCGAATTTCGTGCAAGATGCTGAGGAGAGGAGTGTTCGGGGCTGGGGCTGCTTTTATCGTCTTCACATGTG
TAGCATCAGAGCTGTTCTATATTAGCTTTTCCAAGGCTCATAACCAGACGTCCTCCTTTGCTAAGGACACTGGCATTAGAATGGCAAGCATATAGAAGGCTAGGAGCTTC
TTTATCAATTTGGGATTTATAGGATTTTGGTATGTGTGACTTGTTGATATGAAAAATGAACAACTGAGAGAGATAGGTTACTTGTTGAACTCAGATGTACAAATATGATC
ATTTTATAGTTGAGTGAAGATTTCATGTGGTGGTTTGTGTTATATGCTGTGTCACTATGTTTCTTTAGTATTTGAGCTAGCC
Protein sequenceShow/hide protein sequence
MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAAS
VRNAYHTKYVSSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI