; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G003530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor bHLH162-like
Genome locationCmo_Chr18:2309957..2310739
RNA-Seq ExpressionCmoCh18G003530
SyntenyCmoCh18G003530
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR015660 - Achaete-scute transcription factor-related
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573268.1 Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia]1.9e-6072.58Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE
        MANN IH PS ++ D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEKKEKLM+LGEES          +VQVE
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE

Query:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        A  VGSSLEFLLTT  DYH +L+Q+LQLLQENGT+IV+IN STV DR+FHKII +MVGEG  SE  EGERICE VKKFVSQYKD Q
Subjt:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

KAG7012436.1 Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]7.5e-5773.84Show/hide
Query:  DLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVEARIVGSSLEFLLTT
        D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEKKEKLM+LGEES          +VQVEA  VGSSLEFLLTT
Subjt:  DLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVEARIVGSSLEFLLTT

Query:  RFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        R DYH +L+Q+LQLL+ENGT+IV+IN STV DR+FHKII +MVGEG  SE  EGERICE VKKFVSQYKD Q
Subjt:  RFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

XP_022955188.1 uncharacterized protein LOC111457229 [Cucurbita moschata]1.0e-6173.12Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE
        MANN IH+PS ++ D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEKKEKLM+LGEES          +VQVE
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE

Query:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        A  VGSSLEFLLTTR DYH +L+Q+LQLLQENGT+IV+IN STV DR+FHKII +MVGEG  SE  EGERICE VKKFVSQYKD Q
Subjt:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

XP_022955189.1 transcription factor bHLH162-like [Cucurbita moschata]2.5e-89100Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL
        MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL

Query:  LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID
        LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID
Subjt:  LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID

XP_023542777.1 uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]3.2e-6072.58Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE
        MANN IH PS ++ D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEKKEKLM+LGEES          +VQVE
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE

Query:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        A  VGSSLEFLLTT  +YH +L+QILQLLQENGT+IV+IN STV DR+FHKII +MVGEG  SE  EGERICE VKKFVSQYKD Q
Subjt:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

TrEMBL top hitse value%identityAlignment
A0A6J1GT92 uncharacterized protein LOC1114572294.9e-6273.12Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE
        MANN IH+PS ++ D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEKKEKLM+LGEES          +VQVE
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE

Query:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        A  VGSSLEFLLTTR DYH +L+Q+LQLLQENGT+IV+IN STV DR+FHKII +MVGEG  SE  EGERICE VKKFVSQYKD Q
Subjt:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

A0A6J1GVE3 transcription factor bHLH162-like1.2e-89100Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL
        MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFL

Query:  LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID
        LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID
Subjt:  LTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID

A0A6J1JZ96 transcription factor bHLH167-like7.3e-5066.3Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNK--SEGETMLSDQIENATNYINQLKENVEKLKEKKEKLM--RLGE--ESTMVQVEARIVG
        MA+N IH  + +++D K I      EMKALFS LHSLVPN+  +EGET L  QIENATNYI QLKENVEKLKEK+EKL+  R GE     +VQVEA  VG
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNK--SEGETMLSDQIENATNYINQLKENVEKLKEKKEKLM--RLGE--ESTMVQVEARIVG

Query:  SSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        SSLE LLTT  DY  +L QILQLLQENGT+I+HIN ST+ +R+FHKI+ QMVGEGM+SE  +GERICE VKKFVSQYKDG+
Subjt:  SSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

A0A6J1K2Y3 transcription factor bHLH167-like5.2e-5671.27Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST----MVQVEARIVG
        MANN IH PS ++ D KLIE+NR  EMKALFSRLHSLVPN+S  E ET L DQ+ENATNYI QLKENVEKLKEK+EKLM   E  T    +VQVEA  VG
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKS--EGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST----MVQVEARIVG

Query:  SSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        SSLE LLTT  DY  +L QILQLLQENGT+IV+IN STV DR+FHKII +MVGEG  SE  +GERICE VKKFVSQYKD Q
Subjt:  SSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

A0A6J1K483 transcription factor bHLH162-like6.8e-5667.74Show/hide
Query:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNK--SEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE
        MA+N I+ PS +++D ++IE+NR +EMKAL S+LHSLVPN+  +EGET L DQ+ENATNYI QLKENVEKLKEK+EKLM LGE+ST         +VQVE
Subjt:  MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNK--SEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEEST---------MVQVE

Query:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ
        A +VGSSLE LLTT  DYH +LRQI+QLLQENGTEIV IN+STV +R FHKII QM GEG   E A+GERICE VKKFVS YKD Q
Subjt:  ARIVGSSLEFLLTTRFDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQ

SwissProt top hitse value%identityAlignment
F4I4E1 Transcription factor bHLH1677.3e-0732.75Show/hide
Query:  NPSVSRSDLKLIEKNRGEEMKALFSRLHSLV-PNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMR-----LGEESTMV-QVEARIVGSSLEFL
        N S  R    L EK+R   MK LFS L S V P +      L DQ   AT+Y+ QLKENV  LKEKK  L++     L E S ++ ++  R   S++E  
Subjt:  NPSVSRSDLKLIEKNRGEEMKALFSRLHSLV-PNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMR-----LGEESTMV-QVEARIVGSSLEFL

Query:  LTTRFDYHSI-LRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGE--GMNSERAEGERICEIVKKFV
        L    +   + L +++ + +E G +++  N   + DR  + II Q +    G++  R E ER+ +I+  ++
Subjt:  LTTRFDYHSI-LRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGE--GMNSERAEGERICEIVKKFV

F4JIJ7 Transcription factor bHLH1626.9e-1333.33Show/hide
Query:  NPSVSRS-DLKLIEKNRGEEMKALFSRLHSLVPNKSEGETM-LSDQIENATNYINQLKENVEKLKEKK---------EKLMRLGEEST-----------M
        N   SRS D K +EKNR  +MK+L+S L SL+P+ S  E + L DQ++ A NYI +L+ NVEK +E+K         EKL  +G  S            +
Subjt:  NPSVSRS-DLKLIEKNRGEEMKALFSRLHSLVPNKSEGETM-LSDQIENATNYINQLKENVEKLKEKK---------EKLMRLGEEST-----------M

Query:  VQVEARIVGSSLEFLLTTRFDYHSILRQILQLL-QENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIV
         ++E +  GS     L T  ++  +  +I+++L +E G EI H   S V D +FH +  ++      +     ER+ +IV
Subjt:  VQVEARIVGSSLEFLLTTRFDYHSILRQILQLL-QENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIV

Arabidopsis top hitse value%identityAlignment
AT1G10585.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.2e-0832.75Show/hide
Query:  NPSVSRSDLKLIEKNRGEEMKALFSRLHSLV-PNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMR-----LGEESTMV-QVEARIVGSSLEFL
        N S  R    L EK+R   MK LFS L S V P +      L DQ   AT+Y+ QLKENV  LKEKK  L++     L E S ++ ++  R   S++E  
Subjt:  NPSVSRSDLKLIEKNRGEEMKALFSRLHSLV-PNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMR-----LGEESTMV-QVEARIVGSSLEFL

Query:  LTTRFDYHSI-LRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGE--GMNSERAEGERICEIVKKFV
        L    +   + L +++ + +E G +++  N   + DR  + II Q +    G++  R E ER+ +I+  ++
Subjt:  LTTRFDYHSI-LRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGE--GMNSERAEGERICEIVKKFV

AT2G41240.2 basic helix-loop-helix protein 1007.8e-0424.55Show/hide
Query:  EKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKL-MRLGEESTMVQVEARI-----VGSSLEFLLTTRFDYHSILRQ
        E+ R +++  +FS L S +P  ++ +  +S  +  A  YI +L+E V+KL +KKE+L  ++  +  +V  +        V S    + +TR     ++ Q
Subjt:  EKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKL-MRLGEESTMVQVEARI-----VGSSLEFLLTTRFDYHSILRQ

Query:  ILQL-------------LQENGTEIVHINRS-TVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKK
        I  L             ++E+G  +V  + S +  +R+F+ + +Q+    +NSE   G+R+  + +K
Subjt:  ILQL-------------LQENGTEIVHINRS-TVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKK

AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein4.9e-1433.33Show/hide
Query:  NPSVSRS-DLKLIEKNRGEEMKALFSRLHSLVPNKSEGETM-LSDQIENATNYINQLKENVEKLKEKK---------EKLMRLGEEST-----------M
        N   SRS D K +EKNR  +MK+L+S L SL+P+ S  E + L DQ++ A NYI +L+ NVEK +E+K         EKL  +G  S            +
Subjt:  NPSVSRS-DLKLIEKNRGEEMKALFSRLHSLVPNKSEGETM-LSDQIENATNYINQLKENVEKLKEKK---------EKLMRLGEEST-----------M

Query:  VQVEARIVGSSLEFLLTTRFDYHSILRQILQLL-QENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIV
         ++E +  GS     L T  ++  +  +I+++L +E G EI H   S V D +FH +  ++      +     ER+ +IV
Subjt:  VQVEARIVGSSLEFLLTTRFDYHSILRQILQLL-QENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIV

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.1e-0426.71Show/hide
Query:  EKNRGEEMKALFSRLHSLVP-NKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTM-------------------VQVEARIVGSSLEF
        E+ R +EM +L++ L SL+P +  +G+   SDQ+  A NYI  L+  +++L  +++ LM L   S +                   V V   +VG  +E 
Subjt:  EKNRGEEMKALFSRLHSLVP-NKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTM-------------------VQVEARIVGSSLEF

Query:  LLTTR-FDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGER
        +L++R          +LQ+L E G  +++   S V DR+ + I  ++    +  + AE E+
Subjt:  LLTTR-FDYHSILRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAACTCCATCCATAATCCATCTGTGTCGAGATCCGACCTAAAACTCATAGAGAAGAATAGAGGAGAGGAAATGAAAGCCCTTTTCTCGAGGCTCCATTCTCT
TGTCCCAAACAAAAGCGAAGGTGAAACGATGTTGTCGGATCAGATAGAAAACGCCACGAATTACATAAATCAACTCAAAGAGAATGTGGAAAAATTGAAAGAGAAGAAAG
AGAAGCTAATGAGATTGGGAGAAGAAAGTACAATGGTGCAAGTTGAAGCTCGTATAGTGGGTTCTTCATTGGAGTTTCTTTTGACTACTAGATTTGATTATCACTCGATT
TTAAGACAAATCCTTCAGCTGCTTCAAGAAAATGGAACTGAGATCGTTCATATCAACCGGTCAACGGTCACGGATCGAATTTTTCACAAGATAATTGTTCAGATGGTTGG
AGAAGGGATGAACTCAGAACGCGCCGAAGGTGAAAGGATCTGTGAAATAGTGAAGAAGTTTGTTTCACAATACAAAGATGGACAAAACATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAACAACTCCATCCATAATCCATCTGTGTCGAGATCCGACCTAAAACTCATAGAGAAGAATAGAGGAGAGGAAATGAAAGCCCTTTTCTCGAGGCTCCATTCTCT
TGTCCCAAACAAAAGCGAAGGTGAAACGATGTTGTCGGATCAGATAGAAAACGCCACGAATTACATAAATCAACTCAAAGAGAATGTGGAAAAATTGAAAGAGAAGAAAG
AGAAGCTAATGAGATTGGGAGAAGAAAGTACAATGGTGCAAGTTGAAGCTCGTATAGTGGGTTCTTCATTGGAGTTTCTTTTGACTACTAGATTTGATTATCACTCGATT
TTAAGACAAATCCTTCAGCTGCTTCAAGAAAATGGAACTGAGATCGTTCATATCAACCGGTCAACGGTCACGGATCGAATTTTTCACAAGATAATTGTTCAGATGGTTGG
AGAAGGGATGAACTCAGAACGCGCCGAAGGTGAAAGGATCTGTGAAATAGTGAAGAAGTTTGTTTCACAATACAAAGATGGACAAAACATTGATTGATTCGAAGGTTTAT
GATGTATGTCC
Protein sequenceShow/hide protein sequence
MANNSIHNPSVSRSDLKLIEKNRGEEMKALFSRLHSLVPNKSEGETMLSDQIENATNYINQLKENVEKLKEKKEKLMRLGEESTMVQVEARIVGSSLEFLLTTRFDYHSI
LRQILQLLQENGTEIVHINRSTVTDRIFHKIIVQMVGEGMNSERAEGERICEIVKKFVSQYKDGQNID