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CmoCh18G003780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G003780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:2454850..2456246
RNA-Seq ExpressionCmoCh18G003780
SyntenyCmoCh18G003780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012461.1 hypothetical protein SDJN02_25213, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9389.15Show/hide
Query:  EKNDQISLNQEKGSNQMDKISGCNCEDVSTRHNARALALNQRLGLLDAFKPLRSQPLVVRCILLRCHFAARLRRYQNRPITALPFSRASQHFSNTT----
        EKNDQI LNQEKGSNQMDKISGCNCEDVSTRHNARALALNQRLGLLDAFKPLRSQPLVVRCILLRCHFAARLRRYQNRPITALPFSRASQHFSNTT    
Subjt:  EKNDQISLNQEKGSNQMDKISGCNCEDVSTRHNARALALNQRLGLLDAFKPLRSQPLVVRCILLRCHFAARLRRYQNRPITALPFSRASQHFSNTT----

Query:  -----------------SNHERTGGVLLELRLSTERRRWRRAGAFLGAGVAAHSDGVMKMRSRVRKQRGERGEEEEDKEETGMTECESEGRGTLGQRRNS
                         SNHERTGGVLLELRLSTERRRWRRAGAFLGAGVAAHSDGVMKMRSRVRKQRGERGEEEEDKEETGMTECESEGRGTLGQRRNS
Subjt:  -----------------SNHERTGGVLLELRLSTERRRWRRAGAFLGAGVAAHSDGVMKMRSRVRKQRGERGEEEEDKEETGMTECESEGRGTLGQRRNS

Query:  VKKNIKGEDPRS
         KKNIKGEDPRS
Subjt:  VKKNIKGEDPRS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAATGACCAGATTTCTTTGAATCAAGAGAAGGGCTCTAACCAAATGGACAAAATCTCTGGCTGCAATTGCGAGGATGTCAGCACAAGACACAACGCCAGGGC
ACTTGCTCTCAACCAACGCCTTGGCCTTCTTGATGCTTTCAAACCCCTCCGGTCTCAGCCCCTTGTTGTCCGCTGCATCCTTCTCCGCTGCCACTTTGCTGCCAGGCTTC
GTCGATATCAGAATCGACCCATCACAGCCCTGCCATTTTCAAGAGCTTCTCAACATTTTTCAAACACAACCAGCAATCATGAAAGAACAGGCGGAGTGTTGCTGGAGCTG
AGACTGTCGACAGAGAGGAGGCGGTGGCGGCGGGCGGGGGCCTTTTTAGGTGCTGGTGTTGCAGCACACTCTGATGGTGTGATGAAAATGAGAAGCAGAGTGAGAAAACA
GAGGGGAGAGAGAGGGGAAGAAGAAGAAGATAAAGAAGAGACAGGCATGACTGAGTGTGAGAGTGAAGGAAGGGGCACCTTAGGACAAAGAAGGAATAGTGTAAAGAAGA
ATATAAAAGGGGAAGACCCCAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAATGACCAGATTTCTTTGAATCAAGAGAAGGGCTCTAACCAAATGGACAAAATCTCTGGCTGCAATTGCGAGGATGTCAGCACAAGACACAACGCCAGGGC
ACTTGCTCTCAACCAACGCCTTGGCCTTCTTGATGCTTTCAAACCCCTCCGGTCTCAGCCCCTTGTTGTCCGCTGCATCCTTCTCCGCTGCCACTTTGCTGCCAGGCTTC
GTCGATATCAGAATCGACCCATCACAGCCCTGCCATTTTCAAGAGCTTCTCAACATTTTTCAAACACAACCAGCAATCATGAAAGAACAGGCGGAGTGTTGCTGGAGCTG
AGACTGTCGACAGAGAGGAGGCGGTGGCGGCGGGCGGGGGCCTTTTTAGGTGCTGGTGTTGCAGCACACTCTGATGGTGTGATGAAAATGAGAAGCAGAGTGAGAAAACA
GAGGGGAGAGAGAGGGGAAGAAGAAGAAGATAAAGAAGAGACAGGCATGACTGAGTGTGAGAGTGAAGGAAGGGGCACCTTAGGACAAAGAAGGAATAGTGTAAAGAAGA
ATATAAAAGGGGAAGACCCCAGGAGTTGA
Protein sequenceShow/hide protein sequence
MEKNDQISLNQEKGSNQMDKISGCNCEDVSTRHNARALALNQRLGLLDAFKPLRSQPLVVRCILLRCHFAARLRRYQNRPITALPFSRASQHFSNTTSNHERTGGVLLEL
RLSTERRRWRRAGAFLGAGVAAHSDGVMKMRSRVRKQRGERGEEEEDKEETGMTECESEGRGTLGQRRNSVKKNIKGEDPRS