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CmoCh18G004140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G004140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:2715357..2715671
RNA-Seq ExpressionCmoCh18G004140
SyntenyCmoCh18G004140
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]3.7e-2478.38Show/hide
Query:  LSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        LS  RKFN PSS R L +LQRRRD++I NCGEKVSA QCS+T  CRWCRSD IDDTCF+RAEALRLPQQVFSCD
Subjt:  LSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]5.5e-52100Show/hide
Query:  MGRSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQV
        MGRSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQV
Subjt:  MGRSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQV

Query:  FSCD
        FSCD
Subjt:  FSCD

KDP21149.1 hypothetical protein JCGZ_21620 [Jatropha curcas]3.5e-1447.83Show/hide
Query:  FLVSFLFFSFICVSS-NALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        F +  +F + +  SS +  S T+  +L +S R LL+ QR   ++IPNC   V+  QCS+ P CRWC+S+A+DD CFS+ EA RLPQQVF CD
Subjt:  FLVSFLFFSFICVSS-NALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

XP_021669958.1 uncharacterized protein LOC110657166 [Hevea brasiliensis]1.2e-1752.53Show/hide
Query:  LHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSS-DRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        +H+ +S F V  +F +FI  SS++ + T K+ LP S  R LL+ QR   R+IP C E VS   CS  PNCRWC+S+A+DD CF++AEA RLPQQVF CD
Subjt:  LHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSS-DRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

XP_038723734.1 uncharacterized protein LOC120015395 [Tripterygium wilfordii]7.0e-1548.45Show/hide
Query:  IFLVSFLFFSFI--CVSSNALSETRKFNLPSSDRGLLSLQRR---RDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        I L+  L FSF+    SS+ ++     +  +S R +L+ QRR     R+IP+CG+ VS   CS+ P CRWCRSD +DD CFS+ EA RLPQQVF+CD
Subjt:  IFLVSFLFFSFI--CVSSNALSETRKFNLPSSDRGLLSLQRR---RDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

TrEMBL top hitse value%identityAlignment
A0A067JNS3 Uncharacterized protein1.7e-1447.83Show/hide
Query:  FLVSFLFFSFICVSS-NALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        F +  +F + +  SS +  S T+  +L +S R LL+ QR   ++IPNC   V+  QCS+ P CRWC+S+A+DD CFS+ EA RLPQQVF CD
Subjt:  FLVSFLFFSFICVSS-NALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

A0A0A0LX55 Uncharacterized protein1.7e-3579.41Show/hide
Query:  RSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFS
        RS HL +PLSIFL+SFLFF FI  S NALS  RKFN PSS R L SLQRRRD++I NCGEKVSALQCS+TP CRWCRSD IDDTCF+RAEALRLPQQVFS
Subjt:  RSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFS

Query:  CD
        CD
Subjt:  CD

A0A2P2MZA0 Uncharacterized protein1.7e-1457.83Show/hide
Query:  SSNAL-SETRK--FNLPSSDRGLLSLQ--RRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        SS+AL SE  K  ++L S  RGL  L+   +R + IPNCGE  S  QCS+ P CRWC+S+A+DD CFS+AEA RLPQQVF CD
Subjt:  SSNAL-SETRK--FNLPSSDRGLLSLQ--RRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein1.8e-2478.38Show/hide
Query:  LSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        LS  RKFN PSS R L +LQRRRD++I NCGEKVSA QCS+T  CRWCRSD IDDTCF+RAEALRLPQQVFSCD
Subjt:  LSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

A0A6M2EEZ1 Uncharacterized protein1.3e-1451.58Show/hide
Query:  LSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDR-RIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD
        LS   V+ L  S +  SSNA S +      S DR LL+ QR   R +IP+C E VS  QCS  PNC+WC+S+ +DD CFS+AEA RLPQQVF C+
Subjt:  LSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDR-RIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAGCTTCCATCTTCACACGCCACTCTCCATTTTCCTCGTCTCCTTCCTCTTCTTTTCATTCATCTGCGTCTCAAGTAATGCCTTATCCGAGACTCGCAAATT
CAACTTACCCAGCTCCGATCGGGGTTTACTGAGCTTACAGAGAAGGAGAGATCGTCGGATTCCTAATTGCGGCGAAAAGGTTTCGGCTCTACAGTGCTCGGAGACCCCCA
ATTGCCGGTGGTGCCGGAGTGATGCCATCGATGATACCTGCTTCTCCAGAGCTGAGGCGTTGAGATTGCCCCAACAGGTCTTTTCATGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGAGCTTCCATCTTCACACGCCACTCTCCATTTTCCTCGTCTCCTTCCTCTTCTTTTCATTCATCTGCGTCTCAAGTAATGCCTTATCCGAGACTCGCAAATT
CAACTTACCCAGCTCCGATCGGGGTTTACTGAGCTTACAGAGAAGGAGAGATCGTCGGATTCCTAATTGCGGCGAAAAGGTTTCGGCTCTACAGTGCTCGGAGACCCCCA
ATTGCCGGTGGTGCCGGAGTGATGCCATCGATGATACCTGCTTCTCCAGAGCTGAGGCGTTGAGATTGCCCCAACAGGTCTTTTCATGTGATTGA
Protein sequenceShow/hide protein sequence
MGRSFHLHTPLSIFLVSFLFFSFICVSSNALSETRKFNLPSSDRGLLSLQRRRDRRIPNCGEKVSALQCSETPNCRWCRSDAIDDTCFSRAEALRLPQQVFSCD