; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G004470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G004470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr18:2954523..2959586
RNA-Seq ExpressionCmoCh18G004470
SyntenyCmoCh18G004470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573362.1 hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]4.8e-10389.2Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPN+ VNKHDARRCTNNGIKIVCHVFNPKEPSSSHN+GFPLL+TK AMQSLLCLPLDAAAEGETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
        NKR+AL+ALLANNPS AE IMK VLQTYE  NMQTKY+A LA V ILIHTGGRESLG AI HLN IE WDNKPSDVKRILYRAVIYTLL+ D+EAKTNWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGPKPR
        TFSDQIGKGPKPR
Subjt:  TFSDQIGKGPKPR

KAG7012526.1 hypothetical protein SDJN02_25278 [Cucurbita argyrosperma subsp. argyrosperma]8.9e-5785.93Show/hide
Query:  MQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKR
        MQSLLCLPLDAAAEGETKDISANKR+AL+ALLANNPS AE IMK VLQTYE  NMQTKY+A LA V ILIH GGRESLG AI HLN IE WDNKPSDVKR
Subjt:  MQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKR

Query:  ILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR
        ILYRAVIYTLL+ D+EAKTNWKTFSDQIGKGPKPR
Subjt:  ILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR

XP_022955331.1 uncharacterized protein LOC111457324 [Cucurbita moschata]6.9e-118100Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
        NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGPKPR
        TFSDQIGKGPKPR
Subjt:  TFSDQIGKGPKPR

XP_022994895.1 uncharacterized protein LOC111490483 [Cucurbita maxima]2.1e-8275.71Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPT PLPLSFRRN+SSSVHLVPNE VNKHDARRC+NNGIKIVCH +N  E S S NDGFP LNTK AMQSLLC  LDAAAE ETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
         KRKALQALLANNP+ AE+IMK VLQ Y+ D ++ KYEA LA V ILIHTG R+SL DA+ +LN IE W  KPSD+KRILYRAVIYTLL+   +AK NWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGP
         FSD IG GP
Subjt:  TFSDQIGKGP

XP_023542455.1 uncharacterized protein LOC111802357 [Cucurbita pepo subsp. pepo]6.5e-10087.68Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNE VNKHDARRCTNNGIKIVCHVFNPKEPSSSHN GFPLLNTK AMQSLLCLPLDAAAEGETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
        NKRKALQ LLANNPSGAEKIMK +LQ YE DNMQTKYEA LA V ILIHTGG ESL +AI +LN++E W+NKPSD KRILYRAVIYTLL+   +AKTNWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGPK
        TFSDQIGKGPK
Subjt:  TFSDQIGKGPK

TrEMBL top hitse value%identityAlignment
A0A0A0LXK7 Uncharacterized protein4.4e-2537.18Show/hide
Query:  MNSTALLHRGIA--PTPPLPLSF---------------RRNVSSSVHLVPNEAVNKHDAR----RCTNNGIKIVCHVFNPKEPSSSHNDG--FPLLNTKE
        M+STA+LHRG +  P PPLP +                  N  SSVHL+  ++ + +++R       NN I I C   +   PS S NDG  FP+ N + 
Subjt:  MNSTALLHRGIA--PTPPLPLSF---------------RRNVSSSVHLVPNEAVNKHDAR----RCTNNGIKIVCHVFNPKEPSSSHNDG--FPLLNTKE

Query:  AMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDV
        A++SLLC    +     T  ++  KRKAL ALL  NP  AEKI+K V   Y  + N Q +YEA +A + ILIH G  ESL  A+   ++I   + +PSD 
Subjt:  AMQSLLCLPLDAAAEGETKDISANKRKALQALLANNPSGAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDV

Query:  KRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP
           LY AVI TL+  +     +WK + + I   P
Subjt:  KRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP

A0A1S3BA19 uncharacterized protein LOC1034876761.7e-1636.25Show/hide
Query:  MNSTALLHRGI--APTPPLP--------------LSFRRNVSSSVHLVPNEA----VNKHDAR---RCTNNG-IKIVCHVFNPKEPSSSHNDGFPLLNTK
        M+STA+LHRG   AP P LP              L+FR NV SSVHL+  ++    +N++ +R   +  NNG I I C   +        +  FP  N +
Subjt:  MNSTALLHRGI--APTPPLP--------------LSFRRNVSSSVHLVPNEA----VNKHDAR---RCTNNG-IKIVCHVFNPKEPSSSHNDGFPLLNTK

Query:  EAMQSLLCL-PLDAAAEGETKDISANKRKALQALLANNPS----GAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWD
         A+QSLLC  P D   + +T  I+  K  ALQALL   P+     A +IM  V + Y  D N   +YEA +A + ILIH G  +S   A   L ++E+  
Subjt:  EAMQSLLCL-PLDAAAEGETKDISANKRKALQALLANNPS----GAEKIMKNVLQTYEKD-NMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWD

Query:  NKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP
         +PSD    LY+AVI TLL   S  K +W  +++     P
Subjt:  NKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGP

A0A6J1CHE7 uncharacterized protein LOC1110109061.0e-2943.13Show/hide
Query:  LHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLD----AAAEGETKDISANK
        L RGIAPTPPLPL+  RNVS      P ++  KH  R      I     V  P+   S  + GFPL NT  A+++LLC  +     AA       I+  K
Subjt:  LHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLD----AAAEGETKDISANK

Query:  RKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEW---DNKPSDVKRILYRAVIYTLLDCDSEAKTNW
        ++ALQ L+A N   AE IM  V + Y+ DN QT+Y+A LA V  LIH G  ES   A+ HLN +E     +N PSD K  LY A++ TLLD D EAK +W
Subjt:  RKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEW---DNKPSDVKRILYRAVIYTLLDCDSEAKTNW

Query:  KTFSDQIGKGP
          ++  IG GP
Subjt:  KTFSDQIGKGP

A0A6J1GTH1 uncharacterized protein LOC1114573243.4e-118100Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
        NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGPKPR
        TFSDQIGKGPKPR
Subjt:  TFSDQIGKGPKPR

A0A6J1K2L3 uncharacterized protein LOC1114904831.0e-8275.71Show/hide
Query:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA
        MNSTALLHRGIAPT PLPLSFRRN+SSSVHLVPNE VNKHDARRC+NNGIKIVCH +N  E S S NDGFP LNTK AMQSLLC  LDAAAE ETKDISA
Subjt:  MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISA

Query:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK
         KRKALQALLANNP+ AE+IMK VLQ Y+ D ++ KYEA LA V ILIHTG R+SL DA+ +LN IE W  KPSD+KRILYRAVIYTLL+   +AK NWK
Subjt:  NKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWK

Query:  TFSDQIGKGP
         FSD IG GP
Subjt:  TFSDQIGKGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34540.2 unknown protein2.0e-0630.17Show/hide
Query:  DISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAK
        DI + K +A++ +       A +++++    Y ++  +  +   +A V ILI     E   +A  + + + + + + SDV+  LY+A+IYT+LD D+EAK
Subjt:  DISANKRKALQALLANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAK

Query:  TNWKTFSDQIGKGPKP
          WK F   IG+G  P
Subjt:  TNWKTFSDQIGKGPKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACCGCCACTCCCGTTGTCGTTCCGACGCAACGTGTCTTCTTCCGTTCACCTCGTCCCTAACGAGGCCGT
TAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAAGGAGCCGTCCAGTTCTCATAACGATGGCTTTCCTTTATTAA
ACACCAAAGAGGCTATGCAGTCACTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGTGCAAACAAGAGAAAAGCTTTACAGGCATTGTTG
GCTAATAATCCTTCAGGGGCTGAGAAGATAATGAAGAATGTGCTTCAAACATACGAAAAGGACAATATGCAGACTAAATATGAAGCTATCTTGGCAACAGTCGTAATTCT
CATCCACACGGGAGGAAGAGAAAGCTTGGGTGATGCTATTCACCATCTGAACAAAATAGAAGAGTGGGACAATAAGCCAAGTGATGTAAAGCGTATCCTTTATCGGGCTG
TTATATATACCTTATTGGACTGCGATTCTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATCGGCAAGGGCCCAAAACCGAGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCAATCCAACCAACCACCACCACCCACCGTCATGAACTCCACCGCCCTCCTCCACCGTGGAATCGCCCCAACACCGCCACTCCCGTTGTCGTTCCGACGCAACGTGTC
TTCTTCCGTTCACCTCGTCCCTAACGAGGCCGTTAACAAGCACGACGCTCGGAGGTGTACTAATAATGGCATCAAAATAGTGTGTCACGTATTTAACCCAAAGGAGCCGT
CCAGTTCTCATAACGATGGCTTTCCTTTATTAAACACCAAAGAGGCTATGCAGTCACTGCTGTGCCTCCCTTTGGATGCGGCGGCGGAGGGTGAAACCAAAGACATAAGT
GCAAACAAGAGAAAAGCTTTACAGGCATTGTTGGCTAATAATCCTTCAGGGGCTGAGAAGATAATGAAGAATGTGCTTCAAACATACGAAAAGGACAATATGCAGACTAA
ATATGAAGCTATCTTGGCAACAGTCGTAATTCTCATCCACACGGGAGGAAGAGAAAGCTTGGGTGATGCTATTCACCATCTGAACAAAATAGAAGAGTGGGACAATAAGC
CAAGTGATGTAAAGCGTATCCTTTATCGGGCTGTTATATATACCTTATTGGACTGCGATTCTGAGGCTAAAACTAATTGGAAAACTTTCTCAGACCAAATCGGCAAGGGC
CCAAAACCGAGGTGATAACATTACATCGGGGGAA
Protein sequenceShow/hide protein sequence
MNSTALLHRGIAPTPPLPLSFRRNVSSSVHLVPNEAVNKHDARRCTNNGIKIVCHVFNPKEPSSSHNDGFPLLNTKEAMQSLLCLPLDAAAEGETKDISANKRKALQALL
ANNPSGAEKIMKNVLQTYEKDNMQTKYEAILATVVILIHTGGRESLGDAIHHLNKIEEWDNKPSDVKRILYRAVIYTLLDCDSEAKTNWKTFSDQIGKGPKPR