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CmoCh18G004530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G004530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein TIFY 5A-like
Genome locationCmo_Chr18:3011219..3013532
RNA-Seq ExpressionCmoCh18G004530
SyntenyCmoCh18G004530
Gene Ontology termsGO:0048583 - regulation of response to stimulus (biological process)
InterPro domainsIPR010399 - Tify domain
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573368.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2094.83Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATRRSTSR++RSELCKREDGSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

KAG7012534.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-2094.83Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATRRSTSR++RSELCKREDGSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

XP_022955169.1 protein TIFY 5A-like [Cucurbita moschata]3.8e-22100Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

XP_022994922.1 protein TIFY 5A-like [Cucurbita maxima]5.1e-1993.1Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATRRSTSR+HRSE CKRE GSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

XP_023543011.1 protein TIFY 5B-like [Cucurbita pepo subsp. pepo]3.9e-1993.1Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATRRSTSR++RSE CKREDGSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

TrEMBL top hitse value%identityAlignment
A0A0A0LXJ5 Tify domain-containing protein3.9e-0959.74Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATR----RSTSRQHRSE-------LCKRE--------DGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QA+AIIMLA+R    RST+ +H+ E        C RE         GS SGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATR----RSTSRQHRSE-------LCKRE--------DGSDSGLSMKRSLQR

A0A6J1EGL8 protein TIFY 5A-like1.2e-1066.18Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLAT----------RRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLAT          RR   R    E C  E GS SGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLAT----------RRSTSRQHRSELCKREDGSDSGLSMKRSLQR

A0A6J1GVB9 protein TIFY 5A-like1.8e-22100Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

A0A6J1JX98 protein TIFY 5A-like2.5e-1993.1Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATRRSTSR+HRSE CKRE GSDSGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQR

A0A6J1KLB7 protein TIFY 5A-like1.2e-1066.18Show/hide
Query:  MTIFYNGRVCVADFTEHQARAIIMLATR----------RSTSRQHRSELCKREDGSDSGLSMKRSLQR
        MTIFYNGRVCVADFTE QARAIIMLATR          R   R    E C  E GS SGLSMKRSLQR
Subjt:  MTIFYNGRVCVADFTEHQARAIIMLATR----------RSTSRQHRSELCKREDGSDSGLSMKRSLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATTTTTTACAATGGAAGAGTTTGTGTGGCTGATTTTACAGAGCATCAGGCCAGAGCTATAATAATGCTAGCAACCCGACGATCCACGAGTCGTCAACATCGATC
GGAACTGTGTAAACGCGAAGATGGCTCCGATTCCGGGCTCTCCATGAAGAGATCTCTGCAGAGGGCAAAAAAAGTCGGCTGTTTATCGTCCGCTGCGATGCGACAGCGAT
CAACTAGTGGGTTTGGATATTTCGCTCTGTGGATGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATTTTTTACAATGGAAGAGTTTGTGTGGCTGATTTTACAGAGCATCAGGCCAGAGCTATAATAATGCTAGCAACCCGACGATCCACGAGTCGTCAACATCGATC
GGAACTGTGTAAACGCGAAGATGGCTCCGATTCCGGGCTCTCCATGAAGAGATCTCTGCAGAGGGCAAAAAAAGTCGGCTGTTTATCGTCCGCTGCGATGCGACAGCGAT
CAACTAGTGGGTTTGGATATTTCGCTCTGTGGATGCTGTGA
Protein sequenceShow/hide protein sequence
MTIFYNGRVCVADFTEHQARAIIMLATRRSTSRQHRSELCKREDGSDSGLSMKRSLQRAKKVGCLSSAAMRQRSTSGFGYFALWML