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CmoCh18G004630 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G004630
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionBEST Arabidopsis thaliana protein match is: Galact s in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Genome locationCmo_Chr18:3082102..3082389
RNA-Seq ExpressionCmoCh18G004630
SyntenyCmoCh18G004630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054015.1 hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa]1.2e-2673.2Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRR+PK LDTINEE+ RE+LAS+S+ KID+F+VSSP      SP S A + +VNSKYFLD+  VPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH

KAF7842889.1 uncharacterized protein G2W53_005187 [Senna tora]1.1e-1151.52Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALA---STSALKIDRFTVSSPLSPMAASPPSPATSVSV---NSKYFLDKVPLRPFSIFEH
        A SR+ARFI E  PPQ+V+VMR RT K LDTI EE+ RE  +   S+S+ K    + SSPLSP+++SP + A+S S+   NSKYFL +V  R  SI  H
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALA---STSALKIDRFTVSSPLSPMAASPPSPATSVSV---NSKYFLDKVPLRPFSIFEH

KAG6583880.1 hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2382.67Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVS
        MAATSRLARFISEACPPQFVSVMRRR+PK LDTINEE+HREAL+S+S+LKID+F+VSS  S MAASPPSPATS +
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVS

KAG7019500.1 hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-2780.95Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK
        MAATSRLARFISEACPPQFVSVMRRR+PK LDTINEE+HREAL+S+S+LKID+F+VSS  S MAASPPSPATS +V+SKYFL++
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK

KGN65872.1 hypothetical protein Csa_023250 [Cucumis sativus]1.5e-2468.04Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRR+P+ LDTINEE+ REAL S+S+ KID+F+V SP SP        +++ ++NSKYFLD+  VPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH

TrEMBL top hitse value%identityAlignment
A0A0A0LYE6 Uncharacterized protein7.4e-2568.04Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRR+P+ LDTINEE+ REAL S+S+ KID+F+V SP SP        +++ ++NSKYFLD+  VPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH

A0A314XQS6 Uncharacterized protein4.6e-1151.49Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEH------REALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFE
        M A SRLARFI+E  PPQFVSVMR RT K LDTINEEE        ++L S+S+ K    + SSP  P  AS  S A +    SKYFL +V  R FS+  
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEH------REALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFE

Query:  H
        H
Subjt:  H

A0A5A7UJX7 Uncharacterized protein6.0e-2773.2Show/hide
Query:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH
        MAATSRLARFISEACPPQFVSVMRRR+PK LDTINEE+ RE+LAS+S+ KID+F+VSSP      SP S A + +VNSKYFLD+  VPL PFSIFEH
Subjt:  MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDK--VPLRPFSIFEH

A0A5E4FYK5 PREDICTED: galactosyltransferase family3.0e-1050.52Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSAL----KIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFEH
        A SRLARFI+E  PPQFVSVMR RT K LDTINEEE   A  S  +L           S+P  P  AS  S A +    S+YFL +V  R FS+F H
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSAL----KIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFEH

A0A803R962 Uncharacterized protein2.3e-1048Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEH-------REALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFEH
        A +R+ARFI+E  PPQFV+VMR RT K LDTI EEE        + A +S+SA      + ++  S  A S  S ++S S++SKYFL  VP+  FSIFEH
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEH-------REALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFEH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30260.1 BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1)3.5e-1150Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPL-SPMAASPPSPATSVSVNSKYFLDKVPL
        ATSRLARFI+E  PPQFV+VMRRRT K LDTI EEE      S      +   +SSP  SP ++S  S + S S  S   L+K P+
Subjt:  ATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPL-SPMAASPPSPATSVSVNSKYFLDKVPL

AT4G21060.1 Galactosyltransferase family protein3.1e-0765.85Show/hide
Query:  ATSRLARFISEACPPQFVSVMRRR--TPKALDTINEEEHRE
        ATSRLARF+SE  PPQFV+VMRR     + LDTI EEE++E
Subjt:  ATSRLARFISEACPPQFVSVMRRR--TPKALDTINEEEHRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACATCTCGATTGGCTCGGTTCATCAGCGAGGCGTGCCCTCCACAGTTCGTCTCTGTGATGAGGCGTAGAACGCCCAAAGCTTTGGACACCATTAACGAAGA
AGAGCACAGAGAAGCCCTAGCTTCGACTTCCGCCTTGAAGATCGACAGATTCACTGTTTCTTCGCCGCTGTCTCCCATGGCTGCGTCGCCGCCTTCTCCGGCAACCTCCG
TCTCCGTCAATTCCAAATACTTTCTAGATAAGGTCCCCTTGAGGCCTTTCTCCATTTTCGAGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACATCTCGATTGGCTCGGTTCATCAGCGAGGCGTGCCCTCCACAGTTCGTCTCTGTGATGAGGCGTAGAACGCCCAAAGCTTTGGACACCATTAACGAAGA
AGAGCACAGAGAAGCCCTAGCTTCGACTTCCGCCTTGAAGATCGACAGATTCACTGTTTCTTCGCCGCTGTCTCCCATGGCTGCGTCGCCGCCTTCTCCGGCAACCTCCG
TCTCCGTCAATTCCAAATACTTTCTAGATAAGGTCCCCTTGAGGCCTTTCTCCATTTTCGAGCACTGA
Protein sequenceShow/hide protein sequence
MAATSRLARFISEACPPQFVSVMRRRTPKALDTINEEEHREALASTSALKIDRFTVSSPLSPMAASPPSPATSVSVNSKYFLDKVPLRPFSIFEH