; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh18G004660 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh18G004660
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription termination factor MTEF1, chloroplastic-like
Genome locationCmo_Chr18:3093230..3094135
RNA-Seq ExpressionCmoCh18G004660
SyntenyCmoCh18G004660
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0032502 - developmental process (biological process)
GO:0071472 - cellular response to salt stress (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0042646 - plastid nucleoid (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573378.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.1e-16098.68Show/hide
Query:  MPATPFHSSLCF--SSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ
        MPATPFHSSLC   SSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ
Subjt:  MPATPFHSSLCF--SSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQ

Query:  SKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI
        SKGIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI
Subjt:  SKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLI

Query:  PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR
        PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR
Subjt:  PKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR

Query:  EGA
        EGA
Subjt:  EGA

KAG7012547.1 Transcription termination factor MTEF1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-16099Show/hide
Query:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
        MPATPFHSSLCF  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
Subjt:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK

Query:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
        GIHQKDFAKIFGMCPK+LTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
Subjt:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK

Query:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
Subjt:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

Query:  A
        A
Subjt:  A

XP_022954670.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata]4.5e-163100Show/hide
Query:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
        MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
Subjt:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK

Query:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
        GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
Subjt:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK

Query:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
Subjt:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

Query:  A
        A
Subjt:  A

XP_022994850.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita maxima]6.5e-15497.02Show/hide
Query:  MPATPFHSSLCFSSSSS-SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        MPATPFHSSLCFSSS   SSSSSPSNSHQPNPFLS KPTT LFHKH  PLLHSTLSSQ KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
Subjt:  MPATPFHSSLCFSSSSS-SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
Subjt:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  GA
        GA
Subjt:  GA

XP_023541269.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-15697.39Show/hide
Query:  MPATPFHSSLCFSS----SSSSSSSSPSNSHQPNP-FLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS
        MPATPFHSSLCFSS    SSSSSSSSPSNSHQPNP FLS KPTT LFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS
Subjt:  MPATPFHSSLCFSS----SSSSSSSSPSNSHQPNP-FLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVIS

Query:  FLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK
        FLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK
Subjt:  FLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEK

Query:  TLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE
        TLIPKL YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE
Subjt:  TLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRE

Query:  LLREGA
        LLREGA
Subjt:  LLREGA

TrEMBL top hitse value%identityAlignment
A0A0A0LVD4 Uncharacterized protein1.7e-13184.62Show/hide
Query:  ATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKG
        AT FHSS CF SS +  SSSPSNSHQPN  LSPKP TLL HKHP    LHST+SSQTKEKILCLE+MGVD+GKALS NPSLHS TL+SIHSVISFLQSKG
Subjt:  ATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKG

Query:  IHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKL
        IHQKDFAKIFGMCPK+LTSDVKTDL+PVF FLSEDLK+PDQNFR+AINKCPRLLASSA+DQLKP LFYLQRLGLKDLEALAYHD VLLVSSVEKTLIPKL
Subjt:  IHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKL

Query:  RYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        +YL SLGF++S IVGMVLRCPALLTFSIENNFKPKFEYFS EMH+KLEEL+ FPQYF+FSLEKRIKPRYVET +SGK V LSLMLK+TD EFRELL EG
Subjt:  RYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

A0A5D3DB89 Transcription termination factor MTEF11.4e-13084.62Show/hide
Query:  ATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKG
        AT FHSS CF SS +  SSSPSNSHQPN  LSPKP TLL HKHP    LHSTLSSQTKEKILCLE+MGVD+GKALS NPSLH  TL+SIHSVISFLQSKG
Subjt:  ATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKG

Query:  IHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKL
        IHQKDFAKIFGMCPK+LTSDVKTDLIPVF FLSEDLK+PDQNFR+AINKCPRLLASSA+DQLKP LFYLQRLGLKDLEALAYHD VLLVSSVEKTLIPKL
Subjt:  IHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKL

Query:  RYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        +YL SLGF++S  VGMVLRCPALLTFSIENNFKPKFEYFS EMHRKLEEL+ FPQYF+FSLEKRIKPR+VET +SGK V LSLMLK+TD EFRELL EG
Subjt:  RYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

A0A6J1CE81 transcription termination factor MTEF1, chloroplastic1.5e-13285.05Show/hide
Query:  ATPFHSSLCFSSS--SSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        AT FHSS CFSS   SSS S+S SNSHQPN  L+ KP T LFHKHP    LHSTLSSQ KEKILCLE+MGVDAGKALSLNPSLHS TL+SIHSVISFLQS
Subjt:  ATPFHSSLCFSSS--SSSSSSSPSNSHQPNPFLSPKPTTLLFHKHP-PPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPK+LTSDVKTDLIPVF FLSEDLK+PDQ+FRR INKCPRLLASSAKDQLKP LFYLQRLGL+DLEALAYHD VLLVSSVE+TLIP
Subjt:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YL SLGFS+S  VGMVLRCPALLTFSIENNFKPKFEYFSGEMH KLEEL+ FPQYF+FSLEKRIKPRY+ET QSGK V LSLMLK+TDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  G
        G
Subjt:  G

A0A6J1GT19 transcription termination factor MTEF1, chloroplastic-like2.2e-163100Show/hide
Query:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
        MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK
Subjt:  MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSK

Query:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
        GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK
Subjt:  GIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPK

Query:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
        LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG
Subjt:  LRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREG

Query:  A
        A
Subjt:  A

A0A6J1K2G9 transcription termination factor MTEF1, chloroplastic-like3.1e-15497.02Show/hide
Query:  MPATPFHSSLCFSSSSS-SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
        MPATPFHSSLCFSSS   SSSSSPSNSHQPNPFLS KPTT LFHKH  PLLHSTLSSQ KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS
Subjt:  MPATPFHSSLCFSSSSS-SSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQS

Query:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
        KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP
Subjt:  KGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIP

Query:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        KL+YLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
Subjt:  KLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Query:  GA
        GA
Subjt:  GA

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic1.4e-2129.44Show/hide
Query:  KEKILCLEVMGV---DAGKALSLNPSLHSATLQS-IHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRL
        ++KI  L+  G+   + G+ L+  P L   +++     ++ +    GI ++   +I  + P +   D++  + P   FL E + +P++     + K P L
Subjt:  KEKILCLEVMGV---DAGKALSLNPSLHSATLQS-IHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRL

Query:  LASSAKDQLKP-TLFYLQRLGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEEL
        L +S   +++P  +F L R G+  KD+  +   DP LL  S+   L P +RY  SLG     +  M+   P LL ++++ N +PK+ Y    M R L++L
Subjt:  LASSAKDQLKP-TLFYLQRLGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEEL

Query:  EGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
          FP++FS+SLE+RI PR+    ++  +  L  ML  TD+EF   +R+
Subjt:  EGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

F4JVI3 Transcription termination factor MTERF5, chloroplastic1.9e-2330.71Show/hide
Query:  EKILCLEVMGVDAGKALSLNPSLHSATL-QSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        E +L L +   D    L   P +   +L  ++   ++FL++ GI +  +AKI    P +LT   +  L     FLS+   + ++   R + +CP +++ S
Subjt:  EKILCLEVMGVDAGKALSLNPSLHSATL-QSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYF
         +D+L+PT+ Y + L + D+  L +  P     S+E  L P   +    GF    I  M+ R  AL TFS++ N  PK++YF   M     EL  FPQ+F
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYF

Query:  SFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
         +SL++RIKPRY   ++SG  + L+ +L  +  EF +++++
Subjt:  SFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Q6AUK6 Transcription termination factor MTERF4, chloroplastic4.3e-1526.1Show/hide
Query:  PPLLHSTLSSQTKEKILCLEVMGV---DAGKALSLNPSLHSATLQSIHSV-ISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQ
        P +LH+++       +  L+ M V   D  + L   P L    L+   S  I++L   G+ ++    +    P+VL   V   + P    L E + +   
Subjt:  PPLLHSTLSSQTKEKILCLEVMGV---DAGKALSLNPSLHSATLQSIHSV-ISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQ

Query:  NFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAY-----------------------HDPVLLVSSVE----------------KTLIPKLRY
           R I K P +L    +D++KP +  L   G++  EALA+                        +  +LVSS +                  ++  + +
Subjt:  NFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAY-----------------------HDPVLLVSSVE----------------KTLIPKLRY

Query:  LGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR
        L S GF  S +  MV+ CP LL  +++   K  FEYF  EM R LEEL  FP +F++ LE  ++PR+    + G   SL+ +L  +D +F E ++
Subjt:  LGSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLR

Q84X53 Transcription termination factor MTEF1, chloroplastic7.4e-5244.63Show/hide
Query:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        +EK++ L+ + VD  KAL +NPSL SA + S+ SV + L S G+ +    +I  M P +LTSD +++++PV  FLS ++ + +Q+  ++I++CPRLL SS
Subjt:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY
           QL+P L +L+ LG    + +   + VLLVS+VE+TLIPK+ YL   LGF++  +  MV+R PALLT+S++NN  PK E+F  EM   ++EL+ FPQY
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY

Query:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        FSFSLE++IKPR+   ++ G  + LS MLK +D +F   L E
Subjt:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

Q9FM80 Transcription termination factor MTERF9, chloroplastic2.0e-1724.68Show/hide
Query:  LFHKHPPPLLHSTLSSQTK-EKILCLEVMGVDAGKALSLNPSLHSATLQ-SIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLK
        ++ +H P L  +  S+Q + + +L + V   D  + L   P +   T++ ++ + ISFL   GI      +I    P + +  V+  L P   +L E++ 
Subjt:  LFHKHPPPLLHSTLSSQTK-EKILCLEVMGVDAGKALSLNPSLHSATLQ-SIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLK

Query:  VPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQR-LGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKP
        + + +  + +   P++L             +L + LG     +  +    P LL  S++   +P++ +L S+G   S I+ ++     +L+ S+E+N KP
Subjt:  VPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQR-LGL--KDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLRCPALLTFSIENNFKP

Query:  KFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRY
        K+ Y   E++ ++  L  +P Y S SL++RI+PR+
Subjt:  KFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRY

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein5.3e-5344.63Show/hide
Query:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS
        +EK++ L+ + VD  KAL +NPSL SA + S+ SV + L S G+ +    +I  M P +LTSD +++++PV  FLS ++ + +Q+  ++I++CPRLL SS
Subjt:  KEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASS

Query:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY
           QL+P L +L+ LG    + +   + VLLVS+VE+TLIPK+ YL   LGF++  +  MV+R PALLT+S++NN  PK E+F  EM   ++EL+ FPQY
Subjt:  AKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL-GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQY

Query:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE
        FSFSLE++IKPR+   ++ G  + LS MLK +D +F   L E
Subjt:  FSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLRE

AT2G34620.1 Mitochondrial transcription termination factor family protein7.8e-9764.51Show/hide
Query:  SLCFSSSSSSSSSSPSNSHQ-PNPFLSPKPTTLLFHKHPPPLL---HSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQ
        S   SSS   S   PS   Q  + FLS KPTT+  + H  PL      T++ Q KEKILCLE+MG+D+GKALSLNP L SA L SI SV+ FLQSKGI+ 
Subjt:  SLCFSSSSSSSSSSPSNSHQ-PNPFLSPKPTTLLFHKHPPPLL---HSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQ

Query:  KDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL
         D  +I GMCPK+LTSDV+T+L PVF FLS DL VP+  FRR I KCPRLL SS +DQLKP LFYLQRLGLKDLEALAY DP+LLVSSVE TLIPKLR+L
Subjt:  KDFAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYL

Query:  GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
         S+GFS+   +GM+LRCPAL TFSIENNFKPK +YF  E+  KLE L+ FPQYF+FSLEKRIKPR++E+ + G ++ LSLMLKSTD+EF +LL
Subjt:  GSLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT2G36000.1 Mitochondrial transcription termination factor family protein2.1e-4138.01Show/hide
Query:  SLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKD
        +L F  ++SSSSSS   S    P LS   TT             TL S   EK++ L+ +G+D    ++ +P L S  L ++ SV+ ++ +  I+   +D
Subjt:  SLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKD

Query:  FAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLG
        F ++  MCP++LTS + +  IPV TFL  ++ V    + R+A+ + PRLLA S   QL+PTL++LQR+G+ D     Y    LL  SV+  L+P++ Y  
Subjt:  FAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLG

Query:  SLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
         LGFS+ +   M  R P L  +SI  N++PK +Y   EM R + E+  FPQYFSFSLE RIKPR+      G    L +MLK+ +  FR+ L
Subjt:  SLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT2G36000.2 Mitochondrial transcription termination factor family protein2.1e-4138.01Show/hide
Query:  SLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKD
        +L F  ++SSSSSS   S    P LS   TT             TL S   EK++ L+ +G+D    ++ +P L S  L ++ SV+ ++ +  I+   +D
Subjt:  SLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIH--QKD

Query:  FAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLG
        F ++  MCP++LTS + +  IPV TFL  ++ V    + R+A+ + PRLLA S   QL+PTL++LQR+G+ D     Y    LL  SV+  L+P++ Y  
Subjt:  FAKIFGMCPKVLTSDVKTDLIPVFTFLSEDLKVPD-QNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLG

Query:  SLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL
         LGFS+ +   M  R P L  +SI  N++PK +Y   EM R + E+  FPQYFSFSLE RIKPR+      G    L +MLK+ +  FR+ L
Subjt:  SLGFSKSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELL

AT3G18870.1 Mitochondrial transcription termination factor family protein7.9e-3336.04Show/hide
Query:  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSL--HSATLQSIHSVISFLQSKGIHQKDFAKIFG
        SS SS  SPS+S         KP  L F             +  +E +  L  +G+     +  NP L   +  L  I S ++ L+SKGI  +DF ++  
Subjt:  SSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSL--HSATLQSIHSVISFLQSKGIHQKDFAKIFG

Query:  MCPKVL--TSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFS
        +CP++   T D+ + L PVF FL+ +L    +  R  I  CP +L S  +  L+PTL YL+ LG+++L   +  +  +L + VEK L  K+R+L S+GF 
Subjt:  MCPKVL--TSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFS

Query:  KSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEF
              +  R PA+  +S+E+N +PKFE+   +M R+LEEL+ FPQYF+FSL KRI+PR+   ++    VSLS ML   D +F
Subjt:  KSAIVGMVLRCPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCAACTCCTTTCCACTCTTCTCTCTGCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCCTCAAACTCACACCAACCAAACCCTTTCTTATCACCCAAACC
CACAACCCTCCTCTTCCACAAGCATCCTCCTCCTCTTCTTCACTCCACTCTCTCTTCCCAAACCAAAGAAAAAATCCTCTGCCTCGAAGTCATGGGCGTCGACGCCGGCA
AGGCCCTCTCTCTCAACCCATCTCTCCACTCTGCAACTCTTCAATCCATTCACTCTGTCATCTCCTTCCTCCAATCCAAAGGCATTCACCAAAAGGACTTCGCCAAGATC
TTTGGAATGTGTCCTAAAGTCCTCACTTCTGATGTCAAAACTGATCTAATCCCAGTTTTCACCTTCCTCTCTGAAGATCTTAAAGTCCCAGATCAGAATTTCAGAAGGGC
TATCAACAAATGCCCTAGGTTGCTTGCTTCCAGTGCCAAAGATCAGCTGAAACCTACTCTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCCTTGGCTTACC
ATGATCCTGTGTTGCTGGTTTCTAGTGTGGAGAAGACCTTGATTCCTAAGCTGAGATATTTGGGGAGTTTGGGGTTTTCTAAGAGTGCCATTGTGGGGATGGTTTTGAGA
TGTCCAGCACTGCTTACTTTCAGCATTGAAAATAACTTCAAGCCGAAGTTTGAGTACTTTTCTGGTGAGATGCATAGAAAATTGGAGGAGCTTGAGGGTTTTCCTCAGTA
TTTTTCGTTTAGCTTGGAGAAGAGGATAAAGCCTAGGTATGTGGAGACTGAGCAGAGTGGTAAGGATGTGTCTTTGTCACTTATGCTCAAATCCACAGATGATGAGTTTA
GAGAGTTGTTAAGAGAAGGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCAACTCCTTTCCACTCTTCTCTCTGCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGCCCTCAAACTCACACCAACCAAACCCTTTCTTATCACCCAAACC
CACAACCCTCCTCTTCCACAAGCATCCTCCTCCTCTTCTTCACTCCACTCTCTCTTCCCAAACCAAAGAAAAAATCCTCTGCCTCGAAGTCATGGGCGTCGACGCCGGCA
AGGCCCTCTCTCTCAACCCATCTCTCCACTCTGCAACTCTTCAATCCATTCACTCTGTCATCTCCTTCCTCCAATCCAAAGGCATTCACCAAAAGGACTTCGCCAAGATC
TTTGGAATGTGTCCTAAAGTCCTCACTTCTGATGTCAAAACTGATCTAATCCCAGTTTTCACCTTCCTCTCTGAAGATCTTAAAGTCCCAGATCAGAATTTCAGAAGGGC
TATCAACAAATGCCCTAGGTTGCTTGCTTCCAGTGCCAAAGATCAGCTGAAACCTACTCTGTTTTACCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCCTTGGCTTACC
ATGATCCTGTGTTGCTGGTTTCTAGTGTGGAGAAGACCTTGATTCCTAAGCTGAGATATTTGGGGAGTTTGGGGTTTTCTAAGAGTGCCATTGTGGGGATGGTTTTGAGA
TGTCCAGCACTGCTTACTTTCAGCATTGAAAATAACTTCAAGCCGAAGTTTGAGTACTTTTCTGGTGAGATGCATAGAAAATTGGAGGAGCTTGAGGGTTTTCCTCAGTA
TTTTTCGTTTAGCTTGGAGAAGAGGATAAAGCCTAGGTATGTGGAGACTGAGCAGAGTGGTAAGGATGTGTCTTTGTCACTTATGCTCAAATCCACAGATGATGAGTTTA
GAGAGTTGTTAAGAGAAGGGGCTTAG
Protein sequenceShow/hide protein sequence
MPATPFHSSLCFSSSSSSSSSSPSNSHQPNPFLSPKPTTLLFHKHPPPLLHSTLSSQTKEKILCLEVMGVDAGKALSLNPSLHSATLQSIHSVISFLQSKGIHQKDFAKI
FGMCPKVLTSDVKTDLIPVFTFLSEDLKVPDQNFRRAINKCPRLLASSAKDQLKPTLFYLQRLGLKDLEALAYHDPVLLVSSVEKTLIPKLRYLGSLGFSKSAIVGMVLR
CPALLTFSIENNFKPKFEYFSGEMHRKLEELEGFPQYFSFSLEKRIKPRYVETEQSGKDVSLSLMLKSTDDEFRELLREGA